Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq389 82.4 9e-11 >seq389 Length=32118 Score = 82.4 bits (90), Expect = 9e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 126181 GTGTAAATGTAGCGGGGAGCT-GCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 ||| | ||||| || || ||| || | |||||| ||||||| |||||| || |||||||| Sbjct 14913 GTGAAGATGTAACGAGG-GCTAGCGGCATCCTTACCTCCCTGCAACCGGGTACCAAACTG 14971 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299 ||| ||| | || | | | | ||||||| ||||| ||||||||||| | ||||| Sbjct 14972 ACCTGACGGATACAGAAGCGGGAGGTTGTTGGAGCCCACGAAGTCCTGCGCCATATTGAC 15031 Query 126300 AATGGTC 126306 ||| ||| Sbjct 15032 AATAGTC 15038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611350753967200