Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1009 212 1e-49 seq57 190 4e-43 seq588 183 6e-41 seq415 158 2e-33 seq3589 116 7e-21 seq428 100 5e-16 seq1482 95.1 2e-14 seq389 91.5 3e-13 seq1233 87.8 3e-12 >seq1009 Length=13826 Score = 212 bits (234), Expect = 1e-49 Identities = 586/886 (66%), Gaps = 22/886 (2%) Strand=Plus/Plus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 ||||| || || |||||| || || | |||||||||||||| |||||||| ||| Sbjct 3327 ACGCCAGCTTTGGAGTACTCGCCCACACGCCTCTCGAAGAAGTTGGTCTTGCCCTGGAGC 3386 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 || || | ||||| |||| || ||||||| | || | ||||| ||| || Sbjct 3387 GAGATCATGTCCATCCAGTCGAATGGGTTCTTGACGTTGTAGATCTTGGACACACCCAGC 3446 Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118 | | | |||||||||||||||||||||||||||| ||| || |||||||||| Sbjct 3447 GAGTACAGCAGACGGTCAGCCACGAACTCGATGTACTGGCACATGAGCGTCGAGTTCATG 3506 Query 10119 CCAATCATGCGGCAG-GGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC 10177 || |||| || || |||| | |||||| | ||| || | || | || || || Sbjct 3507 CCGATCA-GCTCCACCGGGAGCGAGTCGCAGACGAACTCGTGCTCAATCTTCACAGCGTC 3565 Query 10178 CTCGACGATGCTCTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGG 10235 ||||| ||| | | || || || |||||||||| | ||||| || |||| | Sbjct 3566 GCGCACGAT-CTCGTGGACTCGGCTCTCCGG-CAGCTTGTTCACCAGCTTGGAGTACATG 3623 Query 10236 AGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCC 10295 || | | || | | ||| | |||||||||||| ||||| | |||||| || || | Sbjct 3624 AGGCATGCGAAATCCGTGTGCATGCCCTCGTCGCGACTGATCATCTCGTTCGAGAAGCTG 3683 Query 10296 AGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAAC 10355 || || |||||||| || || || |||||||| | | ||| || || || ||||| Sbjct 3684 AGCCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGACCGAGCAAAAGGAGCCCGAGAA- 3742 Query 10356 AGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGCG 10413 ||||| |||||||| | | | || | || ||||| | | |||| | |||| Sbjct 3743 -GAAGATGCCCTCCACCGAGGCAAACGCCAGCAGACGCTCCGGGTAGGACGACACACGCG 3801 Query 10414 AAAAGTATTTC--GAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAG 10470 | | | ||| ||||| || ||||| ||| |||||||| ||||||| Sbjct 3802 GGTCGCACCACTTGAGTGCCCAGTTGGCTTTCTTCTGGACGCACGGGATCGTTTCGATAG 3861 Query 10471 CCTCGAAGAGCTTGTTACGCTC---GGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGG 10527 | | ||| | ||| ||| ||| ||||| || | |||| |||||| | Sbjct 3862 CACACAGGAGGTGGTTCTTCTCCACGGT---GTCCTTGATGTACGTGTCAATGAGCAGCG 3918 Query 10528 AGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCG 10587 |||| ||| ||||| | |||| || |||| || ||||||| || ||| Sbjct 3919 AGTAGACCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGAGCCT 3978 Query 10588 AGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGC 10647 ||| | ||||| | | ||||| || ||| ||||| | || ||||| || | Sbjct 3979 CGGGCACTTGCACTTCGTTGCTGAAGTTCATGGCCAGATTCTCATTGACGATGCCGTCAC 4038 Query 10648 TGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTT 10707 || | || |||||| |||| | ||||||||||||||||||||| | || | || || Sbjct 4039 TGGCAGCGAAGAAGGCGAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTGAGCTTCG 4098 Query 10708 CACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAA 10767 | |||||| | || || || | || |||||| | |||||||| | || Sbjct 4099 C---CCAGTCGTTGAGGTCGTGCACCAGGTCGAGCTCCTCGGCCGTCCAGAAGGAAGCCT 4155 Query 10768 CGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 ||||||||||||||||||| | | |||| | | | |||||||||| Sbjct 4156 CGGCCTTCTTGTACATCTGCCACACGTCGTGCTCCTGGATGGGGAA 4201 >seq57 Length=69849 Score = 190 bits (210), Expect = 4e-43 Identities = 381/553 (69%), Gaps = 10/553 (2%) Strand=Plus/Plus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| ||||| |||||| ||| || ||||| || || || ||||| |||||||| || Sbjct 19955 CTGTAGCATGCGCCACATGCATTCCACGTAGTCGCGAGCGTGTCCCCAGTCGCGCTTGGC 20014 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCAC-GCGTGCAAGACCGC 268364 |||| ||| || | ||| ||||| |||| | || ||| | ||| | | | | | Sbjct 20015 ATCCAGGTTGCCCACGAAGAGGCACTTCT-CGACCCCAGCACGAATGCGCACCACAGCTC 20073 Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424 ||||||| || || || ||||| || || ||| | || ||||||||||| || | || Sbjct 20074 GAGTGATCTTGCGTGTGACGAAGGTTGGTCCGCGTCGTGGACTCTCGTGGTTAAACAAGA 20133 Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484 | |||||| || |||||| | || || || || | |||||| || |||| | || | Sbjct 20134 TCCCGTTGACAGCAAACATGTCGTAGGCTTCGCGATGGTTCACCACACTCCAAAAGGCGA 20193 Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTT-TGAGGG 268543 || ||| || || |||| || || || || ||||| |||| || || | || || Sbjct 20194 ACTGCTTCGCTACCCCGTAGGGTGACCGCGGGTGGAACAGCGT-GTCCTCGTCCTGCGGC 20252 Query 268544 ATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTT 268603 | || | ||||| ||| | | |||| || || |||||||||||| | || | | Sbjct 20253 GTAGCTTGCACTTTCCCATACAACTCGCTTGTAGACGCTTGGTAGAACCTCGTCGAGTGC 20312 Query 268604 TCGAGACCGCAGATTCGGATTGCCT--CGAGCAAACGAAGAGTTCCCATGCCATCCACGT 268661 || || || || | || | || | | || | ||||| | ||||| |||| |||| Sbjct 20313 TCCAGTCCACACGTGCGCAG-GCATGTCAAG-AGGCGAAGCGCTCCCAACGCATCGACGT 20370 Query 268662 CCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTAT 268721 |||| || || || | || |||||| || || | ||||||| | ||| |||||||| | Sbjct 20371 CCGCCGTGTATTCAGCCAGCTCGAAGGAGACTTTGACATGGGACATGGCCCCCAGGTTGT 20430 Query 268722 AAACCTCATCCGGTTTGACCTGCTGCACGATCTT-CACGAGGTTCGTTGAGTCGGTGAGG 268780 | || || ||||| || || ||||| || ||| ||||| | ||||| |||||| Sbjct 20431 ACACTTCGTCCGGCCGCACACGCGCCACGACCTGGCAC-AGGTTGGACGAGTCCGTGAGG 20489 Query 268781 TCTCCGTAGTGCA 268793 ||||||||||||| Sbjct 20490 TCTCCGTAGTGCA 20502 >seq588 Length=22666 Score = 183 bits (202), Expect = 6e-41 Identities = 581/887 (66%), Gaps = 24/887 (3%) Strand=Plus/Minus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 ||||||||||| |||||| || || |||||||||||||| |||||||| || Sbjct 21888 ACGCCCGCCTTGGAGTACTCGCCCACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGC 21829 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGG----GGTAACC 10054 || || | ||||| |||| || ||||||| |||| | ||| | | | | Sbjct 21828 GAGATCATGTCCATCCAGTCGAACGGGTTCTTGGCGTTGTAGATCTTAGACACGCCCAGC 21769 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 |||| | | | |||||| ||||||||||||||||| |||| ||| || ||||||| Sbjct 21768 GAGTACAGC----AGGCGGTCGGCCACGAACTCGATGTATTGGCACATGAGCCCCGAGTT 21713 Query 10115 CATGCCAATCATGCGGCAG-GGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 ||| || |||| | || |||| | ||||| | ||| || | || | | || | Sbjct 21712 CATACCGATCAA-CTCCACCGGGAGCGAGTCGCGCACGAACTCGTGCTCAATCACCACAG 21654 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGG-GACAGCTTGTTCTCGAGCTTCGAATAC 10232 | || || || ||| | | || | | ||||||||| ||||| || ||| Sbjct 21653 CGTCGCGCACAAT-CTCGTGCACGCGGCTTTCCGGCAGCTTGTTGATCAGCTTGGAGTAC 21595 Query 10233 AGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAA 10292 | ||| | || | ||| | ||||||||| |||||||||| ||| || || || Sbjct 21594 ATGAGGCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTCGAGAAG 21535 Query 10293 CCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAG 10352 | |||||||||||||| || || || |||||||| || | |||||| || || ||| Sbjct 21534 CTGAGACCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAAGGAGCCCGAG 21475 Query 10353 AACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGC 10410 | |||||| ||||||||| | |||| | || ||||| | | ||||| | | Sbjct 21474 A--AGAAGATCCCCTCCACGGCGGCAAAGGCCAGCAGACGCTCCGGGTAGGAGGACACAC 21417 Query 10411 GCGAAAAGTATTTC--GAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGA 10467 ||| | | | ||| ||||| || ||||| ||| ||||| ||||||| Sbjct 21416 GCGGGTCGCACCACCTGAGCGCCCAGTGAGCTTTCTTCGTGACGCACGGGATGGTCTCGA 21357 Query 10468 TAGCCTCGAAG-AGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGG 10526 | | | || || || | || |||| |||||| || | |||| |||||| Sbjct 21356 T-GGCACGCAGCAGGTGGTCCTTCTCGACACCGTCCTTGATGTACGTGTCAATGAGCAGC 21298 Query 10527 GAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCC 10586 ||||| ||| ||||| | |||| || |||| | ||||||| || ||| Sbjct 21297 GAGTAGACCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCC 21238 Query 10587 GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCG 10646 || || ||||| | | ||||| || ||||||||| |||| || || ||| Sbjct 21237 TCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATACCGTCG 21178 Query 10647 CTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTT 10706 ||| | |||||||| | || | ||||||||||||||| ||||| | | | || || Sbjct 21177 CTGGCAGCAAAGAAAGCCAGCACGTGCTTGATGAAGTGACGCTCGTTGTTCGTGAGGTTC 21118 Query 10707 TCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCA 10766 | |||||| | || || | | || |||||| | |||||||| | ||| Sbjct 21117 GC---CCAGTCATTGAGGTCGTGCACCAAGTCGAGCTCCTCGGCCGTCCAGAAGGAGGCC 21061 Query 10767 ACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 | ||||||||||||||||| | | |||| | | | |||||||||| Sbjct 21060 TCCGCCTTCTTGTACATCTGCCACACGTCGTGCTCCTGGATGGGGAA 21014 >seq415 Length=29729 Score = 158 bits (174), Expect = 2e-33 Identities = 441/668 (66%), Gaps = 24/668 (4%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||||| ||| ||| ||||| |||||| |||||||| || Sbjct 16634 CGCCACTGGATGTACTGGTTGGCAGTCTCGTCGAGGTGAGACTCAATGTGGTGGAATGCG 16693 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || ||||| || | |||||| || ||||||||||| || | ||||| Sbjct 16694 TGCTGAGCGACGTAGGCGAAACGCATGGAAGGGTGCTTCCACACCTGACCACTGGTCGGC 16753 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | |||| || || || | |||||| | || | ||| || ||||| |||||||| | | Sbjct 16754 TCCACCTCACCCGTCAGCATCTTGATCATAGTCGACTTACCGGCACCGTTGGGGCCCAGC 16813 Query 225161 ACGCCAATCCGGGATGACATTGC-AAC--CTGCGAGTTCACGTTGCTGAAGATCTCAGGG 225217 ||| | || ||| || | || || | |||| | |||| | | || ||| Sbjct 16814 ACGGCGATACGGCTCGAAAGCGCGCACGTCACCGAGATGTTGTTGATCGACGGCTTGGGG 16873 Query 225218 ----CCAGTT--TGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271 || | | ||||| | || || | ||| ||||||| ||||| Sbjct 16874 GTTCCCGGGTACTGGTACG---AG--CA-GTTCGTCAGACGAATGATGGGCTTACCCTTG 16927 Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC---C 225328 | ||| | | ||||| || ||||| |||||| ||| |||| ||| | Sbjct 16928 TTCTTGATATCGGCAAGGAAACCAGGCTCCGGGAACGTGAACT---TCACATTGTCCGAC 16984 Query 225329 TTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCG 225388 | || |||||||| | ||||| || || ||||||| | || ||||| || Sbjct 16985 TCGAGCTCGTAGTACGCCTTGGCCTCAGGCTTCTGCTCCACGAACTCGGAGAGGTTGCCC 17044 Query 225389 AGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCA 225448 || || | ||||| || ||||||| |||| || | ||| || | ||| Sbjct 17045 TTGTAGATCTTCAGCTTACGG---GTCTCGTAGTGAATGATGTTGGTGCAGACCGTGTCG 17101 Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGC 225508 ||||||||||||||||| ||||| ||||| || | |||||||| ||||| | | |||| Sbjct 17102 AGGAAGCCAGAGTCGTGCGACACCATGATCGAGGTCACGTTCGGCAGGCTCGTCAGGTAA 17161 Query 225509 GTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGG 225568 | ||||| || ||||| |||| |||| |||||| || || || || || |||||| Sbjct 17162 TTCTCCAGCCAGGCGACGTTCTTGACATCCAAGTGGTTCGTCGGCTCATCAAGCAGCAGG 17221 Query 225569 ATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGAC 225628 ||||| || | || ||||| || | || ||| ||||| ||||| || || || Sbjct 17222 ATGTCGGCCTTCTGCAGCATGGCACGGGCCAGCTCCAGTTTCATCTTCCAACCACCCGAA 17281 Query 225629 AGGGAGCC 225636 || | ||| Sbjct 17282 AGAGTGCC 17289 Score = 114 bits (126), Expect = 2e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||||||||| ||||||||||| | || || || | |||||| ||| || || Sbjct 17467 GGGGAAGCCCTCGAGCTGGCCATTGGAGATGGCGCGCATCAGGGTCGACTTACCACAACC 17526 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 ||||||||| || |||||| | | || ||||||| | ||||| | | |||||| Sbjct 17527 ATTGGGACCGCACAGACCGTAACGGTGGCCACGCTTGAGGCGAAGGCGGGCGTTGTTCAG 17586 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTC 225984 || ||| | ||||| |||||||| ||||||||||| | ||||||||| Sbjct 17587 CAGAATCATACCACCGTAGGCAAGCGAGAACTCGCAGTTGCACAGGTC 17634 Score = 113 bits (124), Expect = 8e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 224449 GTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAG 224508 ||| | ||| | || ||||| ||| ||| || | ||| || | ||| || ||||| Sbjct 16090 GTGGGTAATCATGACCACACCACCGTTGAACTCCTTGATGGCCGAAGCAAGGGCACCAAG 16149 Query 224509 CGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCA 224568 ||| |||||||||||| ||||||| |||||||| || | | | ||| ||| | |||| Sbjct 16150 CGAGTCGCGGTCAAGGTAGTTCGTGGGCTCATCGAGCACCAGGATGTGCGGGTTCAGCCA 16209 Query 224569 CAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628 || || || || | ||| | ||||||||||||||| || || || || || || ||||| Sbjct 16210 CATAGCGGCGCCCAGCACGACCTTCACCTTCTGACCACCGGACAGACCACGCATACGCGA 16269 Query 224629 GTGAGTCGTGAATTCGG 224645 ||| || ||| |||| Sbjct 16270 GTGGGTACCGAACTCGG 16286 >seq3589 Length=3628 Score = 116 bits (128), Expect = 7e-21 Identities = 147/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 173076 TGGCGCACGTCCTGAAGCAGGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCC 173135 ||| | || |||| ||| ||| | || ||||| || |||||||||| |||||| | | Sbjct 2984 TGGGGTACATCCTCAAGACGGAGCAGATCGACACCATCCTGCACTTTGCAGCGCAGTCGC 2925 Query 173136 ATGTGGACAACTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCTACGGGACCC 173195 | ||||||||||||||||| |||||| | | || | || || |||| || || || | Sbjct 2924 ACGTGGACAACTCGTTCGGCAACTCGATCGAGTTCAGCAAGACCAACATCCTGGGCACGC 2865 Query 173196 ACGTTCTCCTGGAATGCGCGAGGCTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTA 173255 |||| || ||||| |||||||||||| ||| || || |||||||| | || | Sbjct 2864 ACGTGCTGCTGGAGGCCGCGAGGCTCTA---CGGCATCAAGAGGTTCATCCA-GTCAGCA 2809 Query 173256 CCGACGAAGTATACGGCGAG 173275 ||||||| || ||||| ||| Sbjct 2808 CCGACGAGGTGTACGGAGAG 2789 >seq428 Length=29300 Score = 100 bits (110), Expect = 5e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 224501 GCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGG 224560 ||||| |||| ||||||| ||| ||||||||||||||||||| | | | ||| ||| Sbjct 4912 GCGCCCAGCGCAGCGCGGTCCAGGTAGTTCGTCGGCTCATCCAGCACCAGCAAGTGCGGG 4853 Query 224561 CACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGG 224620 | | ||||| ||| || | | || |||||||||||||||||||| || || |||||| Sbjct 4852 CGGTTCCACATGGCAGCGGCGATAACAAGCTTCACCTTCTGACCGCCCGACAGACCGCGG 4793 Query 224621 ATC 224623 ||| Sbjct 4792 ATC 4790 >seq1482 Length=10157 Score = 95.1 bits (104), Expect = 2e-14 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||| Sbjct 8959 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 9018 Query 84516 CCCAC 84520 ||||| Sbjct 9019 CCCAC 9023 >seq389 Length=32118 Score = 91.5 bits (100), Expect = 3e-13 Identities = 285/432 (66%), Gaps = 22/432 (5%) Strand=Plus/Plus Query 176109 CCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTTCAATCCGGTCGCCG 176168 |||||||| || || | ||||||| | || || ||||| | ||||||| || || Sbjct 14781 CCATTCACGAGCAGCATCGGGATGATAGGCACGTAGTAAACGGGTTCAACTGGGAATCCA 14840 Query 176169 TCATCCTCGAGGTAGTTCAGCAGACGC-TCGTCGGCCTTGTGGAAAAT--ATCCCGGGTG 176225 || || ||| |||| || ||| ||| || ||| | | | |||| | | | || ||| Sbjct 14841 TCGTCGTCGGCGTAGCGCAACAG-CGCATCATCGTCTTCGGGGAATACCAAGCGCGTGTG 14899 Query 176226 TTGGGGGACAGTTGTGTGAAGATATACCTAGC---AGACGCACTGTCCTTGCCTCCGTGA 176282 | | ||| |||||||| || | || || ||| ||||| ||||| || Sbjct 14900 CTTTTG--CAGCAACGTGAAGATGTAACGAGGGCTAGCGGCA---TCCTTACCTCCCTGC 14954 Query 176283 AGGCGGGAACCGAATTGTCCGCGAGGA---AGAAGCAAATTGATGTTATTCGAACCCACG 176339 | |||| ||| || || || ||| |||||| || ||| || || |||||| Sbjct 14955 AACCGGGTACCAAACTGACCTGACGGATACAGAAGCGG---GAGGTTGTTGGAGCCCACG 15011 Query 176340 TAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGATAGCCG 176399 |||| || ||||| ||| || | || || || || || |||||||| ||| | Sbjct 15012 AAGTCCTGCGCCATATTGACAATAGTCGAGTGTAGCGATGCTTCACCGTGGTGGTAGGCT 15071 Query 176400 GCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTC--TTGTACGAGGTTGC 176457 | || |||||| ||| || || ||||| || || || | ||| | || ||| |||| Sbjct 15072 GTGTGCTCACTGCAGTAGCCCGCCAACTGTGCCACCTTCACTTCGCTCGT--GAGCTTGC 15129 Query 176458 GCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCGACG 176517 ||||||| || || || | || ||||| ||| ||||||||| ||||| || || | Sbjct 15130 GCTTCAAACACGCAAAAAGCACTTTACGCTGTGAGATCTTCAGACCGTCGACCACTGATG 15189 Query 176518 GAATGGAACGCT 176529 | | || |||| Sbjct 15190 GCAGCGATCGCT 15201 >seq1233 Length=11135 Score = 87.8 bits (96), Expect = 3e-12 Identities = 235/356 (66%), Gaps = 9/356 (3%) Strand=Plus/Minus Query 31956 AGACCGGGACACTCCTTGGGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTC 32015 || |||||| || |||||| ||| || |||| | ||| || ||| || | |||| Sbjct 7084 AGTCCGGGAGCTTCGTTGGGGCAGAACAGGCTCCATTTGCCATTGGACTCGACCCTCTTC 7025 Query 32016 ATGAACAGGTCGTTCAGCCACATCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCA 32075 ||||| || ||| | ||| | |||||| ||||| | | || || || ||| | Sbjct 7024 ATGAAGAGATCGGGGACCCAGAGCGCGTAGAACAGGTCGCGCGCCCGGTGCAGCTCGTTG 6965 Query 32076 CCCTGGTTACGTCGGAGCAGCAGGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTAC 32135 || ||||| ||||| |||||| || | | ||||| ||| ||||| ||||| Sbjct 6964 CCGTGGTTCTTGCGGAGGTCCAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAG 6905 Query 32136 ACGGCGAAAGATCCCTTGCG---GCGACCCCCCTGGTTTGCGTATGCAGATGTCGTGTCG 32192 | |||||| || |||||||| || || ||||||| |||| || | ||||||| Sbjct 6904 ATGGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTA-GCGC--GCCGTGTCG 6848 Query 32193 T---ACACCTTCAGCATGGGTACGATGCCATCAGACTCGCCATTGGTCCCCTGGATCTTG 32249 | |||| ||||||||| | ||| |||| ||| ||| || || || |||| | | Sbjct 6847 TTGAACACGCGCAGCATGGGGATGATCCCATTGGACGAGCCGTTCGTGCCTCGGATGTAG 6788 Query 32250 GAACCACGGCCGCGAATGTCGCTCAGGTGCAGGCCGATGCCGCCACCAAACTTGGA 32305 | |||| |||| | || | | |||||||||||| | ||||||| Sbjct 6787 CTGTTGGTGGCGCGGATGTTGTGCATGCTGATGCCGATGCCGCCGGCCCACTTGGA 6732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921560225048840