Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1233 149 6e-31 >seq1233 Length=11135 Score = 149 bits (164), Expect = 6e-31 Identities = 294/432 (68%), Gaps = 5/432 (1%) Strand=Plus/Plus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 || || ||| |||||||||| || | ||| | ||| |||||||| | |||| | Sbjct 6510 CAGCAGATGATCATGCGCGTGGCGCTGGGCATCCACAAGGGCGACATCCAGGCCGCGCTC 6569 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 || || ||||| | ||| || || || ||||||||||||| ||||| | ||| | Sbjct 6570 GAGACGTACGAGCTCATGAGCCAGAAGTTCTTCACGCACGCGACCCCCACGCTCTTCAAC 6629 Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095 ||||||||| | || ||| |||| ||||| || |||| || ||| || ||| | Sbjct 6630 GCCGGCACGCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTGGCCATGCAGGACGACTCC 6689 Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGC 123155 ||| || ||||| || || | | ||||||| || ||||| | | ||||||| Sbjct 6690 ATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCCGGCGGC 6749 Query 123156 ATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGA 123215 || ||| | | | ||||| || | | | | | ||| |||| || |||| |||| Sbjct 6750 ATCGGCATCAGCATGCACAACATCCGCGCCACCAACAGCTACATCCGAGGCACGAACGG- 6808 Query 123216 ATCG-CCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGA 123274 ||| || ||| || |||||||||| || | ||| || | | ||| |||| || Sbjct 6809 CTCGTCCAATGGGATCATCCCCATGCTGCGCGTGTTCAACGACACGGCGCGCTACGTGGA 6868 Query 123275 CCAG---GGCGGCAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGA 123331 |||| |||||||| ||||| ||| || | || ||||| || || |||||||||| || Sbjct 6869 CCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCCATCTACCTGGAGCCGTGGCACGCCGA 6928 Query 123332 TGTGTACGATTT 123343 |||| ||| || Sbjct 6929 CGTGTTCGAGTT 6940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451972706734120