Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1233 107 5e-18 >seq1233 Length=11135 Score = 107 bits (118), Expect = 5e-18 Identities = 172/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 ||||||||||| | |||||||||| || ||| || || ||| ||| | | Sbjct 7237 GCGTCCTTGTACAGCATGAAGGGCACCCCCGTCTCGATCTGGGCGTCCAGGATGGCGAAC 7178 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | ||||| || | ||| | | || | || || | ||||| |||| ||| Sbjct 7177 CACAGCTGCTGGGCGTTAATGGTCTTGCGGGCCCGGCCCTCCGTCTCGTACTTCTCGTAG 7118 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 ||| | || || || | ||| | |||| || ||||||||||| || || || || Sbjct 7117 AGGGCCTCAAACTCGTCCCCCCAGCACTCGTACAGTCCGGGAGCTTCGTTGGGGCAGAAC 7058 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || ||||| || |||| || ||||||||||||||||||||| |||| ||| | |||| Sbjct 7057 AGGCTCCATTTGCCATTGGACTCGACCCTCTTCATGAAGAGATCGGGGACCCAGAGCGCG 6998 Query 173347 TAGAACA 173353 ||||||| Sbjct 6997 TAGAACA 6991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181739078199637