Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq41 96.9 3e-15 >seq41 Length=78637 Score = 96.9 bits (106), Expect = 3e-15 Identities = 121/164 (74%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 ||||||||||| ||||| || |||| ||||| || || || || |||||| | | ||| Sbjct 48876 GCGTGGAACCCAGCTGATCTCAACGAGATGGCGCTGCCACCATGCCACATGTTCTGCCAG 48935 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 || |||| | | || | | || |||| |||||| |||| ||||| || || ||| | Sbjct 48936 TTTTACGTGGCC--GACGGGGAGT-TGTCTTGCCAGATGTACCAGCGCTCTGCCGACATG 48992 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCAC 142733 |||||||| || ||||||||||| ||||||||||| || Sbjct 48993 GGACTCGGCGTCCCTTTCAACATTGCCAGCTACGCGCTTCTAAC 49036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500465435072720