Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_028940.1 Length=170286 Score E Sequences producing significant alignments: (Bits) Value seq41 89.7 6e-13 >seq41 Length=78637 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 147124 CCGTTGCGCACGTTAAACTGGTAGAACATGTGGCATGGTGGCAAAGCCATTTGGTTAATC 147183 |||| | ||||| ||||||| ||||||||||||||||||||| ||||| | ||| | Sbjct 48952 CCGTCGGCCACGTAAAACTGGCAGAACATGTGGCATGGTGGCAGCGCCATCTCGTTGAGA 48893 Query 147184 TCAGCAGGGTTCCATGCAGAAACAACCAGGCGGCGGTCAGTTGG 147227 ||||| |||||||| ||||| | || | |||||||| || || Sbjct 48892 TCAGCTGGGTTCCACGCAGAGAGCACAATCCGGCGGTCCGTCGG 48849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544750447293520