Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2561 405 5e-108 seq1300 396 3e-105 seq1932 392 3e-104 seq2569 154 2e-32 seq2529 145 8e-30 seq2563 127 2e-24 >seq2561 Length=604796 Score = 405 bits (448), Expect = 5e-108 Identities = 609/858 (71%), Gaps = 8/858 (1%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| |||||||| |||||||||| | ||||| || || | | ||| Sbjct 370677 GAGCCGTTCCTGGTGGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 370736 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 |||||| |||||||| ||||| ||||||||||||||||| | ||||||| |||||||| Sbjct 370737 GTGTGGCAGATGTACAAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCTG 370796 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 | ||| || ||||||| | | ||| |||||||||||||| |||||||||||| Sbjct 370797 GTGCACGACCTGAAGGACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAGCAC 370856 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGA-GCGTTT 116814 |||||||| || ||||| ||||||||||||||||| |||||||| |||| ||| | || Sbjct 370857 GTGCTGGCATTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGG-CGATGAACTT 370915 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | | |||||||| ||| | ||||| || |||||||||||||| ||||||||||| || Sbjct 370916 CAGCAATGAGGTGCAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATCGA 370975 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 |||| | |||||||| |||| ||| || |||||||||||| | | | ||| Sbjct 370976 GAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTGGA 371035 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 |||| | ||| || |||||||||||||| |||||||| | |||||||| || Sbjct 371036 GAAGGATCACTTGCTGCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGCTG 371095 Query 116995 GGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGC 117054 |||||| ||| | | | | | ||| | ||||| ||| |||| ||||| Sbjct 371096 GGCGCTCAAGTGGTGTGACCCTCGTGTTTCGTCCTACCCGGAGCGTCTGCTGGCGTTCGC 371155 Query 117055 GGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACG 117114 ||||| |||||| | ||||| ||||| ||| | |||| || ||||||||||| || Sbjct 371156 CGCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCG 371215 Query 117115 CGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCA 117174 |||||||||||| || |||| ||| |||||||||||| | |||||||||| |||| Sbjct 371216 CGGCCTCATGCCTGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGGGACGAGGGCATGCA 371275 Query 117175 TTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTG---CAGCGACCGAGCGCGGCGCG 117231 ||||| || || | ||| | | | |||||| ||| ||| | | | |||| Sbjct 371276 CACGGACTTCGCGTGCCTCATGTACTCGAAGTTGGTGAACAAGCTGCCG-GAGAGCCGCG 371334 Query 117232 CGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCT 117291 | || | |||||| ||||| || | || ||||| ||| | | ||| |||| Sbjct 371335 TG-CA-CGCGATCGTGCGTGACGCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTCGCT 371392 Query 117292 GCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGC 117351 || ||| ||| | || | || | | |||| || |||||||||||||| || Sbjct 371393 CCCCGTGGAGCTGATCGGCATGAACTCTGCGCTCATGTGCCAGTACATCGAGTTCGTGGC 371452 Query 117352 CGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGA 117411 |||| | |||||| | |||| | ||||| ||||||| | |||||| | || Sbjct 371453 CGACCGCCTGCTGTACTCACTGGGTGCATCCAAGATCTACAACGTGAAGAACCCGTTCGA 371512 Query 117412 CTTTATGAACCTCATCTC 117429 || ||| | | ||||| Sbjct 371513 CTGGATGGATATGATCTC 371530 >seq1300 Length=5041 Score = 396 bits (438), Expect = 3e-105 Identities = 598/843 (71%), Gaps = 8/843 (1%) Strand=Plus/Minus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 |||||||| ||| |||||| | ||||| || || | | ||| |||||| |||||| Sbjct 2586 GAGAACCCGAACCGATTCGTGCTGTTCCCGATCCAGGAGCACGACGTGTGGCAGATGTAC 2527 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710 || ||||| ||||||||||||||||| | ||||||| |||||||| | ||| || Sbjct 2526 AAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGACCTGAAG 2467 Query 116711 GACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTC 116770 ||||||| | | ||| |||||||||||||| |||||||||||||||||||| || ||| Sbjct 2466 GACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAGCACGTGCTGGCATTCTTC 2407 Query 116771 GCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGA-GCGTTTCGCTCAGGAGGTGCA 116829 || ||||||||||||||||| |||||||| |||| ||| | ||| | |||||||| Sbjct 2406 GCTGCCAGCGACGGCATCGTGAACGAGAACCTGG-CGATGAACTTCAGCAATGAGGTGCA 2348 Query 116830 GGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGA 116889 ||| | ||||| || |||||||||||||| ||||||||||| |||||| | |||||||| Sbjct 2347 AGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCGGA 2288 Query 116890 AATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTT 116949 |||| ||| || |||||||||||| | | | ||||||| | ||| | Sbjct 2287 GGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTGGAGAAGGATCACTTGCT 2228 Query 116950 GAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGAT 117009 | |||||||||||||| |||||||| | |||||||| |||||||| ||| Sbjct 2227 GCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGGTG 2168 Query 117010 CGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGT 117069 | | | | | ||| | ||||| ||| |||| ||||| ||||| |||||| | Sbjct 2167 TGACCCTCGTGTTTCGTCCTACCCGGAGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCAT 2108 Query 117070 CTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGG 117129 ||||| ||||| ||| | |||| || ||||||||||| |||||||||||||| || Sbjct 2107 TTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGG 2048 Query 117130 CCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 |||| ||| |||||||||||| | |||||||||| |||| ||||| || || Sbjct 2047 TCTGAGCTTCTCGAACGAGCTCATCAGCCGGGACGAGGGCATGCACACGGACTTCGCGTG 1988 Query 117190 TTTGCTGTTCAAGCATTTGGTG---CAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGT 117246 | ||| | | | |||||| ||| ||| | | | |||| | || | |||||| Sbjct 1987 CCTCATGTACTCGAAGTTGGTGAACAAGCTGCCG-GAGAGCCGCGTG-CA-CGCGATCGT 1931 Query 117247 CACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCT 117306 ||||| || | || ||||| ||| | | ||| |||| || ||| ||| | Sbjct 1930 GCGTGACGCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTCGCTCCCCGTGGAGCTGAT 1871 Query 117307 GGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCT 117366 || | || | | |||| || |||||||||||||| |||||| | |||||| Sbjct 1870 CGGCATGAACTCTGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGCCTGCTGTA 1811 Query 117367 CGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCAT 117426 | |||| | ||||| ||||||| | |||||| | |||| ||| | | || Sbjct 1810 CTCACTGGGTGCATCCAAGATCTACAACGTGAAGAACCCGTTCGACTGGATGGATATGAT 1751 Query 117427 CTC 117429 ||| Sbjct 1750 CTC 1748 >seq1932 Length=9237 Score = 392 bits (434), Expect = 3e-104 Identities = 597/843 (71%), Gaps = 8/843 (1%) Strand=Plus/Minus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 |||||||| ||| |||||| | ||||| || || | | ||| |||||| |||||| Sbjct 868 GAGAACCCGAACCGATTCGTGCTGTTCCCGATCCAGGAGCACGACGTGTGGCAGATGTAC 809 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710 || ||||| ||||||||||||||||| | ||||||| |||||||| | ||| || Sbjct 808 AAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGACCTGAAG 749 Query 116711 GACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTC 116770 ||||||| | | ||| |||||||||||||| ||||||||||||||||| || || ||| Sbjct 748 GACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAGCACGTGCTAGCATTCTTC 689 Query 116771 GCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGA-GCGTTTCGCTCAGGAGGTGCA 116829 || ||||||||||||||||| |||||||| |||| ||| | ||| | |||||||| Sbjct 688 GCTGCCAGCGACGGCATCGTGAACGAGAACCTGG-CGATGAACTTCAGCAATGAGGTGCA 630 Query 116830 GGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGA 116889 ||| | ||||| || |||||||||||||| ||||||||||| |||||| | |||||||| Sbjct 629 AGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCGGA 570 Query 116890 AATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTT 116949 |||| ||| || |||||||||||| | | | ||||||| | ||| | Sbjct 569 GGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTGGAGAAGGATCACTTGCT 510 Query 116950 GAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGAT 117009 | |||||||||||||| |||||||| | |||||||| |||||||| ||| Sbjct 509 GCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGGTG 450 Query 117010 CGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGT 117069 | | | | | ||| | ||||| ||| |||| ||||| ||||| |||||| | Sbjct 449 TGACCCTCGTGTTTCGTCCTACCCGGAGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCAT 390 Query 117070 CTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGG 117129 ||||| ||||| ||| | |||| || ||||||||||| |||||||||||||| || Sbjct 389 TTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGG 330 Query 117130 CCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 |||| ||| |||||||||||| | |||||||||| |||| ||||| || || Sbjct 329 TCTGAGCTTCTCGAACGAGCTCATCAGCCGGGACGAGGGCATGCACACGGACTTCGCGTG 270 Query 117190 TTTGCTGTTCAAGCATTTGGTG---CAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGT 117246 | ||| | | | |||||| ||| ||| | | | |||| | || | |||||| Sbjct 269 CCTCATGTACTCGAAGTTGGTGAACAAGCTGCCG-GAGAGCCGCGTG-CA-CGCGATCGT 213 Query 117247 CACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCT 117306 ||||| || | || ||||| ||| | | ||| |||| || ||| ||| | Sbjct 212 GCGTGACGCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTCGCTCCCCGTGGAGCTGAT 153 Query 117307 GGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCT 117366 || | || | | |||| || |||||||||||||| |||||| | |||||| Sbjct 152 CGGCATGAACTCTGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGCCTGCTGTA 93 Query 117367 CGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCAT 117426 | |||| | ||||| ||||||| | |||||| | |||| ||| | | || Sbjct 92 CTCACTGGGTGCATCCAAGATCTACAACGTGAAGAACCCGTTCGACTGGATGGATATGAT 33 Query 117427 CTC 117429 ||| Sbjct 32 CTC 30 >seq2569 Length=732260 Score = 154 bits (170), Expect = 2e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || ||| | |||||||| |||||||| | ||||| || | Sbjct 55048 AACATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCT 55107 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||| | | | |||| | ||| | ||||| | ||||| ||||||||||| | || Sbjct 55108 TCGGACTCCATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGA 55166 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || |||| ||| ||||| |||||||| |||| ||||| || | |||||| Sbjct 55167 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTA 55226 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||| | |||||||| | ||| |||| || | || ||| Sbjct 55227 CAACATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGC 55278 Score = 154 bits (170), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | |||||||| |||||||| | ||||| || | | Sbjct 55279 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 55338 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | | |||| | ||| | ||||| | ||||| ||||||||||| | ||||| Sbjct 55339 GACTCCATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 55397 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 55398 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 55457 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | |||||||| | ||| |||| || | || ||| Sbjct 55458 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGC 55506 Score = 152 bits (168), Expect = 5e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | |||||||| |||||||| | ||||| || | | Sbjct 55507 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 55566 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | | |||| | ||| | ||||| | ||||| ||||||||||| | ||||| Sbjct 55567 GACTCCATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 55625 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 55626 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 55685 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | |||||||| | ||| |||| Sbjct 55686 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCG 55721 >seq2529 Length=382763 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| || |||||| | ||||| || | | Sbjct 60351 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 60292 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| | ||| | ||||||| ||||| || |||||||| | ||||| Sbjct 60291 GACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 60233 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 60232 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 60173 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | |||||||| || ||| |||| || | |||||| Sbjct 60172 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 60124 Score = 141 bits (156), Expect = 1e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || | |||||||| || |||||| | ||||| || | Sbjct 60810 AAGATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCG 60751 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||| | | |||| | ||| | ||||||| ||||| || |||||||| | || Sbjct 60750 TCGGACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGA 60692 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || || | ||| ||||| ||||| || |||| ||||| || | |||||| Sbjct 60691 CCAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTA 60632 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||||| | |||||||| || ||| |||| || | |||||| Sbjct 60631 CAACATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 60580 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | |||||||| || |||||| | ||||| || | | Sbjct 60123 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 60064 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| | ||| | ||||||| ||||| || |||||||| | ||||| Sbjct 60063 GACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 60005 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 60004 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 59945 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | |||||||| || ||| |||| || | |||||| Sbjct 59944 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 59896 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | |||||||| || |||||| | ||||| || | | Sbjct 60579 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCA 60520 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| | ||| | ||||||| ||||| || |||||||| | ||||| Sbjct 60519 GACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 60461 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 60460 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 60401 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | |||||||| || ||| |||| || | |||||| Sbjct 60400 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 60352 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | |||||||| || |||||| | ||||| || | | Sbjct 59895 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 59836 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| | ||| | ||||||| ||||| || |||||||| | ||||| Sbjct 59835 GACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 59777 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 59776 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 59717 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | |||||||| || ||| |||| || | ||||| Sbjct 59716 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 59669 >seq2563 Length=678508 Score = 127 bits (140), Expect = 2e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| |||||||| | ||||| || | || Sbjct 614706 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTAGAGCCGTCC 614647 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||||| | | | ||||| | ||||| | ||||| || ||||| || | |||||| Sbjct 614646 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCAG 614587 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| ||||| ||| ||||||||| Sbjct 614586 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 614527 Query 40870 ATCCAGAAGG 40879 |||||||||| Sbjct 614526 ATCCAGAAGG 614517 Score = 102 bits (112), Expect = 8e-17 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || |||||| | |||||||| || || |||| ||| ||||| |||||||| |||| ||| Sbjct 195365 GGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGC 195424 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 || || ||||||||||| ||||||||| ||||||||| || ||| |||| || | Sbjct 195425 ACTCTTTCGGACTACAACATTCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGTCTGCGT 195484 Query 40912 GGCGGCGGC 40920 || || ||| Sbjct 195485 GGTGGTGGC 195493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515202609941760