Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2516 302 4e-77 seq1300 210 2e-49 seq2561 206 2e-48 seq1932 205 8e-48 seq2529 161 9e-35 seq2569 131 1e-25 seq2563 127 2e-24 >seq2516 Length=319815 Score = 302 bits (334), Expect = 4e-77 Identities = 991/1525 (65%), Gaps = 31/1525 (2%) Strand=Plus/Plus Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 ||||| || | || |||||||| | ||| ||||| || ||| |||| |||| || ||| Sbjct 120482 AACTCACCAGCCAGCACGCGGCGGTTGTACATGTTCGACGTGTACGGCTCGATGGACTCA 120541 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||||| |||| |||||||| ||||| || || |||||||| |||| || |||||||| Sbjct 120542 TTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGGCATCGGAGCCACGAGGAGCGAGTTG 120601 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACA-GATCG--GAC 22642 | | ||||||||| | || ||||||| | ||| ||||||| | || ||| Sbjct 120602 CGGATGCCGTGCTTGATCACGTTCTCCTTGAGCGCAGCCCAATCCCACAAGCCCGAAGAC 120661 Query 22643 GGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCG 22702 || || || | ||||||| ||| | || || | || || || || || | | Sbjct 120662 GGGGTGAC---GCCCCACATGTCGAACTGGAAGATACCCTTGCTGGCAGGCGATCCCTGG 120718 Query 22703 TACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGC-CTCCAACGCGCCGTA 22761 |||| |||||||| || | ||| | || || | | ||||| | |||| Sbjct 120719 AACGTCTCGTACGGGCCCAGCTCCTTGGCGATCTC-CATCGAGGTCTCCATAGAAGCGTA 120777 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCG-GCGACGCTTTCGTACGGCA 22820 || || || |||||||| ||| |||| | ||| ||| ||| ||| ||| ||| || Sbjct 120778 GTAGATCGTTTCGAAGATGTTCATGTTGAGTTCACGGGCTTGCGG-GCTCTCGAACG-CA 120835 Query 22821 TACG-CATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879 || ||| | | || || ||||| | |||||| ||||| ||||| | ||| |||| Sbjct 120836 TAGTTCATGAGGATAAATGCATCCGCGAGACCCTGGACGCCAATACCAACCGGGCGGTGG 120895 Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939 || || ||| ||||| || || || | || || || ||||| Sbjct 120896 CGCATGTTGGACTTGCGCGCCTCCTCCACGGGGTAGTAGTTGACGTCAATGACCTTGTTC 120955 Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT 22999 ||||| | |||||| | || || | | ||| | | || || || Sbjct 120956 AAGTTCCGGGTCACCACCTTGGTCACCTCGTACAGCTTCTGGTAGTTGAACACTCC--AT 121013 Query 23000 TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059 | || |||||||| || ||| | || || || ||||| || |||||||| || Sbjct 121014 CCTCCA-CAAACTTGGGGAGGGCCACAGACGCCAGGTTGCACACCGCCACCTCATCGGGC 121072 Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119 ||||||||||| | ||| ||| || | ||||| | |||||||| | || | Sbjct 121073 GACGTGTACTCCATAATCTCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGC 121132 Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 ||||| || || ||| || |||||||| |||||| ||||| ||||||||| | | Sbjct 121133 TGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATC 121192 Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT-GAACACGTCGCACGTACCTGCC 23238 |||| || | ||| || ||||| ||| || | || | | || || | || Sbjct 121193 TGCGCGTCCAGGATGGCGAACCACAGCTGCTGGGCATTGATCGTCTTGCGCGCGCGCCCC 121252 Query 23239 TTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC 23298 | |||| |||||||| | ||||| | || || ||| | || | || ||| || || Sbjct 121253 TCCTTC-TCGTACTTCTCGTACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCC 121311 Query 23299 GGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAA 23358 ||| | | | || || | || |||||| | || ||| || || |||| || Sbjct 121312 GGGGGCCTCATTGGGGCAGAAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAA 121371 Query 23359 AAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGT 23418 ||||| || | ||| ||||||||||| || ||||| ||||| | ||| |||||| Sbjct 121372 CAGATCGGGGACCCACAGAGCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTG 121431 Query 23419 GTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGC 23478 |||||| || |||| || || |||||||| || ||||||||||| ||||| | ||| Sbjct 121432 GTTCTTGCGCAGCTCCAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAGATGGC 121491 Query 23479 AAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACAC 23538 |||| ||| | ||| || ||||| || || || |||||||||| ||| | || Sbjct 121492 GAACGAGCCTTTGCGCTTGCCTCCTCCCTGGTCCACATAGCGGGCCGTGTCATTGAAGAC 121551 Query 23539 TCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTT 23598 || ||||| || | || |||||||| | ||| | || ||| | | | || | Sbjct 121552 CCTCAGCATGGGGATGATCCCGTTGGATGATCCG--TTCG--TGCCGCGGATGTAGCTGT 121607 Query 23599 T----GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | || || | |||||| | | || || |||||| || | || || || || Sbjct 121608 TCGTGGCGCGGATGTTGTGCATACTAATGCCAATACCTCCGGCCCACTTGGAGATGCACG 121667 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 |||| || || || |||||||| |||||||| || ||| || | | || | || || Sbjct 121668 CGCACTGCTTGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTGCATGGCCAGCAGGA 121727 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 ||||||| |||| |||| ||||| |||| || || || || | ||||||| Sbjct 121728 AACACGACGACAGCTGCGGACGCGGCGTGCCGGCGTTAAAGAGCGTGGGCGTCGCGTGCG 121787 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 ||||| | | ||||| || | ||||||| | || || | ||||| | || Sbjct 121788 TAAAGAACATCTGTGACATGAGCTCATACGTGTGCAGTGCCGCCTGGATGTCTTGCTTGT 121847 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CGACCGTGACGCCGT 23891 | ||||| | || |||||||| ||||| | || || | || ||||| | |||| Sbjct 121848 GAATACCCAGCGCCACGCGCATGATCATCTGCTGGGGGCGCTCCACGACCTT---TCCGT 121904 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | | ||| || || || | | ||| || || || || ||||| || | ||||| Sbjct 121905 TCACGCGGAAGAGGTAGCCCCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGT 121964 Query 23952 CACGATCGTGCACTATGGCCGAATT 23976 | || ||||| | |||||||| || Sbjct 121965 CCCGGTCGTGGATGATGGCCGAGTT 121989 >seq1300 Length=5041 Score = 210 bits (232), Expect = 2e-49 Identities = 580/871 (67%), Gaps = 30/871 (3%) Strand=Plus/Minus Query 57538 GATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAG 57597 |||| || |||| ||||| | | | ||| | ||| | |||||||| ||||| || | Sbjct 2573 GATTCGTGCTGTTCCCGATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAGG 2514 Query 57598 CATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC 57657 | ||||| ||||| | ||| || | |||||| | || |||| || |||| || Sbjct 2513 CGTCGTTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGACCTGAAGGACTGGGGGAACC 2454 Query 57658 TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATG 57717 | | || ||| | | || || || |||||| |||| || ||||| || ||| | Sbjct 2453 TGACGGACAACGAGCGCCACTTCATCAAGCACGTGCTGGCATTCTTCGCTGCCAGCGACG 2394 Query 57718 GTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA-CAA-GAAGTGCAAGTGACGGAGGC 57775 | || || |||||||| ||| ||| || |||| ||| || ||||||||| ||||||| Sbjct 2393 GCATCGTGAACGAGAACCTGG-CGAT-GAACTTCAGCAATGAGGTGCAAGTGCCGGAGGC 2336 Query 57776 GAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCT 57835 | ||||| ||||| || || | ||||| || ||| | || || || |||| ||||| Sbjct 2335 TCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCT 2276 Query 57836 ACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGA 57895 || ||||| |||||| | |||||| || ||||| | || | || ||||| Sbjct 2275 GCTGATCGACACGTACATCAAGGACGCCGTGGAGAAGGATCACTTGCTGCGTGCCATCGA 2216 Query 57896 AACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAA---GCG 57951 || || || ||| | | |||||||| ||| | |||| ||| | | | Sbjct 2215 GACGATCCCGTGCG-TGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGGTGTGACCCTCGTG 2157 Query 57952 CCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTT 58011 || || | | | ||| | || | |||||||||||||| || || || ||||| | Sbjct 2156 TTTCGTCC---TACCCGGAGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCATTTTCTTCT 2100 Query 58012 CGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACG 58070 |||| ||| ||| | || || ||| | ||||| |||||||| ||||| || |||| Sbjct 2099 CGGGTTCCTTCTGC-TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGC 2041 Query 58071 TTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATG 58130 || |||||| | || || |||||||| | || || || || |||||||| ||| Sbjct 2040 TTCTCGAACGAGCTCATCAGCCGGGACGAGGGCATGCACACGGACTTCGCGTGCCTCATG 1981 Query 58131 TACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGAC---ATTATCACCGAG 58187 ||||| | | || || || | || ||| || | || || || | || Sbjct 1980 TACTCGAAGTTGGTGAACAA---GCTGCCGGAGAGCCGCGTGCACGCGATCGTGCGTGAC 1924 Query 58188 GCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATG 58247 || || | ||| || | ||||| || | ||| | || || |||| || |||| ||| Sbjct 1923 GCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTCGCTCCCCGTGGAGCTGATCGGCATG 1864 Query 58248 AACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTG 58307 ||| || | |||| ||||||| ||||| || |||||| | | |||| | ||| Sbjct 1863 AACTCTGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGCC---TGCT-GTACTC 1808 Query 58308 ATTGGAGAGCGTC----AT-TACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCT 58362 | ||| | || || || |||||| ||| || ||||| || | ||| || |||||| Sbjct 1807 ACTGG-GTGCATCCAAGATCTACAACGTGAAGAACCCGTTCGACTGGATGGATATGATCT 1749 Query 58363 CGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 |||| |||||||||| ||||| ||||| || Sbjct 1748 CGCTGCAGGGCAAGACCAACTTCTTCGAGAA 1718 >seq2561 Length=604796 Score = 206 bits (228), Expect = 2e-48 Identities = 562/842 (67%), Gaps = 30/842 (4%) Strand=Plus/Plus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||| | ||| | |||||||| ||||| || || ||||| ||||| | ||| || | ||| Sbjct 370734 GACGTGTGGCAGATGTACAAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGAC 370793 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 ||| | || |||| || |||| ||| | || ||| | | || || || Sbjct 370794 CTGGTGCACGACCTGAAGGACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAG 370853 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| |||| || ||||| || ||| || || || |||||||| ||| ||| || Sbjct 370854 CACGTGCTGGCATTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGG-CGAT-GA 370911 Query 57747 TTTTCA-CAA-GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 |||| ||| || ||||||||| ||||||| | ||||| ||||| || || | |||| Sbjct 370912 ACTTCAGCAATGAGGTGCAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCA 370971 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || || || |||| ||||| || ||||| |||||| | |||||| || Sbjct 370972 TCGAGAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCG 371031 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCA 57923 ||||| | || | || ||||| || || || ||| | | |||||||| Sbjct 371032 TGGAGAAGGATCACTTGCTGCGTGCCATCGAGACGATCCCGTGCG-TGGAGAAGAAGGCC 371090 Query 57924 GAGTGGTCAATCAAATGGATAAAAA---GCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 ||| | |||| ||| | | | || || | | | ||| | || | Sbjct 371091 CGCTGGGCGCTCAAGTGGTGTGACCCTCGTGTTTCGTCC---TACCCGGAGCGTCTGCTG 371147 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGAT 58039 |||||||||||||| || || || ||||| ||||| ||| ||| | || || ||| | Sbjct 371148 GCGTTCGCCGCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGC-TCCATCTTCTGGCT 371206 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| |||||||| ||||| || |||| || |||||| | || || ||||| Sbjct 371207 CAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGGGACGA 371266 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159 ||| | || || || || |||||||| |||||||| | | || || || | || Sbjct 371267 GGGCATGCACACGGACTTCGCGTGCCTCATGTACTCGAAGTTGGTGAACAA---GCTGCC 371323 Query 58160 GGATCGCATCTTGGAC---ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 ||| || | || || || | || || || | ||| || | ||||| || | Sbjct 371324 GGAGAGCCGCGTGCACGCGATCGTGCGTGACGCTGTGGTGATTGAGCACGAGTTCGTGAG 371383 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| | || || |||| || |||| |||||| || | |||| ||||||| || Sbjct 371384 CGACTCGCTCCCCGTGGAGCTGATCGGCATGAACTCTGCGCTCATGTGCCAGTACATCGA 371443 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTC----AT-TACAACACG 58331 ||| || |||||| | | |||| | ||| | ||| | || || || |||||| | Sbjct 371444 GTTCGTGGCCGACCGCC---TGCT-GTACTCACTGG-GTGCATCCAAGATCTACAACGTG 371498 Query 58332 AAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAA 58391 || || ||||| || | ||| || |||||||||| |||||||||| ||||| ||||| Sbjct 371499 AAGAACCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAG 371558 Query 58392 AA 58393 || Sbjct 371559 AA 371560 >seq1932 Length=9237 Score = 205 bits (226), Expect = 8e-48 Identities = 577/868 (66%), Gaps = 30/868 (3%) Strand=Plus/Minus Query 57538 GATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAG 57597 |||| || |||| ||||| | | | ||| | ||| | |||||||| ||||| || | Sbjct 855 GATTCGTGCTGTTCCCGATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAGG 796 Query 57598 CATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC 57657 | ||||| ||||| | ||| || | |||||| | || |||| || |||| || Sbjct 795 CGTCGTTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGACCTGAAGGACTGGGGGAACC 736 Query 57658 TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATG 57717 | | || ||| | | || || || |||||| | || || ||||| || ||| | Sbjct 735 TGACGGACAACGAGCGCCACTTCATCAAGCACGTGCTAGCATTCTTCGCTGCCAGCGACG 676 Query 57718 GTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA-CAA-GAAGTGCAAGTGACGGAGGC 57775 | || || |||||||| ||| ||| || |||| ||| || ||||||||| ||||||| Sbjct 675 GCATCGTGAACGAGAACCTGG-CGAT-GAACTTCAGCAATGAGGTGCAAGTGCCGGAGGC 618 Query 57776 GAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCT 57835 | ||||| ||||| || || | ||||| || ||| | || || || |||| ||||| Sbjct 617 TCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCT 558 Query 57836 ACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGA 57895 || ||||| |||||| | |||||| || ||||| | || | || ||||| Sbjct 557 GCTGATCGACACGTACATCAAGGACGCCGTGGAGAAGGATCACTTGCTGCGTGCCATCGA 498 Query 57896 AACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAA---GCG 57951 || || || ||| | | |||||||| ||| | |||| ||| | | | Sbjct 497 GACGATCCCGTGCG-TGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGGTGTGACCCTCGTG 439 Query 57952 CCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTT 58011 || || | | | ||| | || | |||||||||||||| || || || ||||| | Sbjct 438 TTTCGTCC---TACCCGGAGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCATTTTCTTCT 382 Query 58012 CGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACG 58070 |||| ||| ||| | || || ||| | ||||| |||||||| ||||| || |||| Sbjct 381 CGGGTTCCTTCTGC-TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGC 323 Query 58071 TTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATG 58130 || |||||| | || || |||||||| | || || || || |||||||| ||| Sbjct 322 TTCTCGAACGAGCTCATCAGCCGGGACGAGGGCATGCACACGGACTTCGCGTGCCTCATG 263 Query 58131 TACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGAC---ATTATCACCGAG 58187 ||||| | | || || || | || ||| || | || || || | || Sbjct 262 TACTCGAAGTTGGTGAACAA---GCTGCCGGAGAGCCGCGTGCACGCGATCGTGCGTGAC 206 Query 58188 GCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATG 58247 || || | ||| || | ||||| || | ||| | || || |||| || |||| ||| Sbjct 205 GCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTCGCTCCCCGTGGAGCTGATCGGCATG 146 Query 58248 AACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTG 58307 ||| || | |||| ||||||| ||||| || |||||| | | |||| | ||| Sbjct 145 AACTCTGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGCC---TGCT-GTACTC 90 Query 58308 ATTGGAGAGCGTC----AT-TACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCT 58362 | ||| | || || || |||||| ||| || ||||| || | ||| || |||||| Sbjct 89 ACTGG-GTGCATCCAAGATCTACAACGTGAAGAACCCGTTCGACTGGATGGATATGATCT 31 Query 58363 CGCTCGAGGGCAAGACAAACTTTTTCGA 58390 |||| |||||||||| ||||| ||||| Sbjct 30 CGCTGCAGGGCAAGACCAACTTCTTCGA 3 >seq2529 Length=382763 Score = 161 bits (178), Expect = 9e-35 Identities = 178/236 (75%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 ||||||| ||||| || ||||| |||||| |||| ||||| ||||||||| | ||||| Sbjct 60815 GAATCAAG-ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTG 60757 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 || ||||| ||| |||| | || || |||| ||| ||||||||||||| | ||| Sbjct 60756 GAGCCGTCGGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCG 60697 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 || ||||||||||| || || ||||||||||| ||| | |||||| || ||||| Sbjct 60696 CCTGACCAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC 60637 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || || ||||| || || || ||||| || | ||| | ||||| Sbjct 60636 GACTACAACATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 60581 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||| |||| ||||| ||||||||| | ||||| || ||||| Sbjct 59896 CATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTC 59837 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 59836 GGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 59777 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | |||||| || ||||||| || || Sbjct 59776 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 59717 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || || || ||||| || | ||| | ||||||| Sbjct 59716 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGTA 59667 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||| |||| ||||| ||||||||| | ||||| || ||||| Sbjct 60352 CATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTC 60293 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 60292 GGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 60233 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | |||||| || ||||||| || || Sbjct 60232 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 60173 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || || ||||| || | ||| | ||||| Sbjct 60172 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 60125 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||| |||| ||||| ||||||||| | ||||| || ||||| Sbjct 60124 CATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTC 60065 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 60064 GGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 60005 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | |||||| || ||||||| || || Sbjct 60004 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 59945 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || || ||||| || | ||| | ||||| Sbjct 59944 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 59897 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||| |||| ||||| ||||||||| | ||||| || ||||| Sbjct 60580 CATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTC 60521 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 60520 AGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 60461 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | |||||| || ||||||| || || Sbjct 60460 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 60401 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || || ||||| || | ||| | ||||| Sbjct 60400 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 60353 >seq2569 Length=732260 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || ||||| ||||| |||| ||||| || ||||| | ||||| || || Sbjct 55048 AACATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCT 55107 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||| |||| | || || |||| ||| |||||||| ||| | ||||||||| Sbjct 55108 TCGGACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGAC 55167 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| ||||| ||| |||| ||| | || ||||||| || Sbjct 55168 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTAC 55227 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || |||| || Sbjct 55228 AACATCCAGAAGGAGTCTACGCTGCACTTGGTGCT 55262 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| || ||||| | ||||| || || || Sbjct 55278 CATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTC 55337 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| |||||||| ||| | ||||||||||| Sbjct 55338 GGACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 55397 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| | || ||||||| || || Sbjct 55398 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 55457 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || |||| || Sbjct 55458 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCT 55490 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| || ||||| | ||||| || || || Sbjct 55506 CATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTC 55565 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| |||||||| ||| | ||||||||||| Sbjct 55566 GGACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 55625 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| | || ||||||| || || Sbjct 55626 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 55685 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || |||| || Sbjct 55686 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCT 55718 >seq2563 Length=678508 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || ||||| ||||| ||||| || ||||| | ||||| || || Sbjct 614710 AATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTAGAGCC 614651 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||||| | || | ||||| |||| ||| ||||||||||||| | ||||| || Sbjct 614650 GTCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGA 614591 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || || ||||| ||||| ||| | || ||| Sbjct 614590 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 614551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445752046321920