Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2561 416 5e-111 seq1300 416 5e-111 seq2516 396 5e-105 seq1932 394 2e-104 >seq2561 Length=604796 Score = 416 bits (460), Expect = 5e-111 Identities = 617/865 (71%), Gaps = 15/865 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || || |||||| || Sbjct 370721 GATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAGGCGTCGTTCTGGACGGC 370780 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | ||||||| | ||| | | ||||| | ||| | || ||||| Sbjct 370781 CGAGGAGCTGGACCTGGTGCACGACCTGAAGGACTGGGGGAACCTGACGGACAACGAGCG 370840 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| || | ||||| |||||||| ||| |||||||| || || ||||| Sbjct 370841 CCACTTCATCAAGCACGTGCTGGCATTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAA 370900 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTACGGCT 42522 |||||| | | |||| || |||||||| || | ||||| |||||||||||||||| Sbjct 370901 CCTGGCGATGAACTTCAGCAATGAGGTGCAAGTGCCG-GAGGCTCGCTGCTTCTACGGCT 370959 Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582 ||||||| ||||| |||||| | ||||| ||||||||| | ||| || ||||||||| Sbjct 370960 TCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACA 371019 Query 42583 TCCTGGATCCCGTCGAGCG---TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCA 42639 || ||| |||| ||| | || |||| ||||| |||||||| || ||| Sbjct 371020 TCAAGGACGCCGTGGAGAAGGATCACTTGCTGCGT---GCCATCGAGACGATCCCGTGCG 371076 Query 42640 TCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCG 42699 | |||||||||| |||||||||||| ||| || || | | | | | | Sbjct 371077 TGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGGTGTGACCCTCGTGTTTCGTCCTACCCGG 371136 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 || | ||| | || || ||||||| |||||||| ||||||||||| ||||| ||||| Sbjct 371137 AGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGCTCCA 371196 Query 42760 TCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||||||||| || || || ||||| || || | |||||||||||| |||||| Sbjct 371197 TCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCTGGTCTGAGCTTCTCGAACGAGCTCATC 371255 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 ||| |||||||||| |||| | |||||| || |||||| ||| ||||| | | | Sbjct 371256 AGCCGGGACGAGGGCATGCACACGGACTTCGCGTGCCTCATGTACTCGA---AGTTGGTG 371312 Query 42879 CACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 |||||| || || || || | || ||| | || || |||| ||| ||| | Sbjct 371313 AACAAGCTGCCGGAGAGCCGCGTGCACGCGATCGTGCGTGACGCTGTGGTGATTGAGCAC 371372 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||||| | | | ||||| |||||| ||| ||||||||||| | ||||||||| Sbjct 371373 GAGTTCGTGAGCGACTCGCTCCCCGTGGAGCTGATCGGCATGAACTCTGCGCTCATGTGC 371432 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC-GCCTCTA 43057 |||||||| ||| ||| ||||||| || |||| | ||||| || || |||| Sbjct 371433 CAGTACATCGAGTTCGTGGCCGACCGCCTGCTGTACTCACTGGGT-GCATCCAAGATCTA 371491 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | | ||| ||||||| ||||| | |||||| || |||||||||||||||| Sbjct 371492 CAACGTGAAGAACCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTT 371551 Query 43118 TTTCGAGAAGCGCGTCGCCGACTAC 43142 |||||||||||||| | ||| ||| Sbjct 371552 CTTCGAGAAGCGCGTGGGCGAGTAC 371576 >seq1300 Length=5041 Score = 416 bits (460), Expect = 5e-111 Identities = 617/865 (71%), Gaps = 15/865 (2%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || || |||||| || Sbjct 2557 GATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAGGCGTCGTTCTGGACGGC 2498 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | ||||||| | ||| | | ||||| | ||| | || ||||| Sbjct 2497 CGAGGAGCTGGACCTGGTGCACGACCTGAAGGACTGGGGGAACCTGACGGACAACGAGCG 2438 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| || | ||||| |||||||| ||| |||||||| || || ||||| Sbjct 2437 CCACTTCATCAAGCACGTGCTGGCATTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAA 2378 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTACGGCT 42522 |||||| | | |||| || |||||||| || | ||||| |||||||||||||||| Sbjct 2377 CCTGGCGATGAACTTCAGCAATGAGGTGCAAGTGCCG-GAGGCTCGCTGCTTCTACGGCT 2319 Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582 ||||||| ||||| |||||| | ||||| ||||||||| | ||| || ||||||||| Sbjct 2318 TCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACA 2259 Query 42583 TCCTGGATCCCGTCGAGCG---TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCA 42639 || ||| |||| ||| | || |||| ||||| |||||||| || ||| Sbjct 2258 TCAAGGACGCCGTGGAGAAGGATCACTTGCTGCGT---GCCATCGAGACGATCCCGTGCG 2202 Query 42640 TCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCG 42699 | |||||||||| |||||||||||| ||| || || | | | | | | Sbjct 2201 TGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGGTGTGACCCTCGTGTTTCGTCCTACCCGG 2142 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 || | ||| | || || ||||||| |||||||| ||||||||||| ||||| ||||| Sbjct 2141 AGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGCTCCA 2082 Query 42760 TCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||||||||| || || || ||||| || || | |||||||||||| |||||| Sbjct 2081 TCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCTGGTCTGAGCTTCTCGAACGAGCTCATC 2023 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 ||| |||||||||| |||| | |||||| || |||||| ||| ||||| | | | Sbjct 2022 AGCCGGGACGAGGGCATGCACACGGACTTCGCGTGCCTCATGTACTCGA---AGTTGGTG 1966 Query 42879 CACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 |||||| || || || || | || ||| | || || |||| ||| ||| | Sbjct 1965 AACAAGCTGCCGGAGAGCCGCGTGCACGCGATCGTGCGTGACGCTGTGGTGATTGAGCAC 1906 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||||| | | | ||||| |||||| ||| ||||||||||| | ||||||||| Sbjct 1905 GAGTTCGTGAGCGACTCGCTCCCCGTGGAGCTGATCGGCATGAACTCTGCGCTCATGTGC 1846 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC-GCCTCTA 43057 |||||||| ||| ||| ||||||| || |||| | ||||| || || |||| Sbjct 1845 CAGTACATCGAGTTCGTGGCCGACCGCCTGCTGTACTCACTGGGT-GCATCCAAGATCTA 1787 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | | ||| ||||||| ||||| | |||||| || |||||||||||||||| Sbjct 1786 CAACGTGAAGAACCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTT 1727 Query 43118 TTTCGAGAAGCGCGTCGCCGACTAC 43142 |||||||||||||| | ||| ||| Sbjct 1726 CTTCGAGAAGCGCGTGGGCGAGTAC 1702 >seq2516 Length=319815 Score = 396 bits (438), Expect = 5e-105 Identities = 1415/2169 (65%), Gaps = 100/2169 (5%) Strand=Plus/Plus Query 243735 CCACGCTGAACTGGACGGGTGCGACGGCGGCCTTG-GTCCTC--AGGTAGTACATGCCGG 243791 ||||| ||||||||| || || |||| | | |||| | | |||||||||||| | Sbjct 120126 CCACGGTGAACTGGATGG---CGTCGGCTTTCGGGCGTCCGCGCATGTAGTACATGCCCG 120182 Query 243792 TCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCT 243851 ||||||| || | |||||||| || |||||||| ||||||||| | ||| | Sbjct 120183 TCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATGGACGTCAGCTTGCTAATCGTC---- 120238 Query 243852 TTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC- 243910 |||||| ||| | | | ||| || |||||||||||| | | ||| |||| Sbjct 120239 --GGGTCG-----GCAATGTGA-ATGTTCAGCGACTGGCTCTGGCAAATGTAGG-CGCCA 120289 Query 243911 CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATG 243970 || || || | || | | | | ||||||| ||||| || |||||||||| | Sbjct 120290 CGGTCCGCCGACAGGTCCAACACGGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTC 120349 Query 243971 GGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGC 244030 ||||| || || || | || | |||||||| ||||| || | | | | Sbjct 120350 TCCTTGACCTGGTCCGGAATGGATTTCACCTTCTGCACGGAGCCACCGTCAGCCAGAATC 120409 Query 244031 TGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTC---CAGCGCCTCGACCAGGTGC 244087 ||| |||||| | | |||| | ||||| |||| |||| ||| | |||| | Sbjct 120410 TGGTTGCGCACCTCAGGCGTCCAGATGCCCA---GCTCGATCAGCTCCTTCATGAGGTAC 120466 Query 244088 CTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC 244147 ||||||| | | ||||| || | |||||||||||| | ||| | ||| || | Sbjct 120467 TTGTTCACGATCGTGAACTCACCAGCCAGCACGCGGCGGTTGTACATGTTCGACGTGTAC 120526 Query 244148 GGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGAC 244207 ||||||||| ||| ||||||||| ||||| ||||| |||||| ||||| || | | Sbjct 120527 GGCTCGATGGACTCATTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGGCATCGGAGCC 120586 Query 244208 ACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATG-CGGAGTC--TGAGCTCGTTCCAG 244264 || || || ||| | | ||||||| | ||| || || ||||| | ||| Sbjct 120587 ACGAGGAGCGAGTTGCGGATGCCGTGCTT---GATCACGTTCTCCTTGAGCGCAGCCCAA 120643 Query 244265 TCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCC 244324 ||||||| |||||| || || | | || |||||||||||| ||||| | | ||| Sbjct 120644 TCCCACAAGCCCGA-AGA----CGGGGT-GACGCCCCACATGTCGAACTGGAAGATACCC 120697 Query 244325 TTGCTGACGGGGCTGCCCTCGTAGGTCGGGTA-GGGACCGTCGCGCTGGGCCAGCT---T 244380 |||||| | || |||| | | ||| ||| ||| || | | || ||| | || | Sbjct 120698 TTGCTGGCAGGCGATCCCTGGAACGTCTCGTACGGGCCCAGCTC-CTTGGCGATCTCCAT 120756 Query 244381 ACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCG 244440 || |||| | | ||||||||||| || |||||||| || |||| | || || Sbjct 120757 CGAGGTCTCC---ATAGAAGCGTAGTAGATCGTTTCGAAGATGTTCATGTTGAGTTCACG 120813 Query 244441 GGCCTTGCCGCAGGTGAAGGGGAT-GCCCATCATCATGAAGACGTCGGCCAGTCCCTGCA 244499 ||| |||| | | | | || | ||| | || || | || || || ||||| | Sbjct 120814 GGC-TTGCGGGCTCTCGAACGCATAGTTCATGAGGATAAATGCATCCGCGAGACCCTGGA 120872 Query 244500 CGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA---GCGCATGGCTTCGGGCACGGGGT 244556 |||| || || | || | ||| ||| ||||||| |||| || || |||||||| Sbjct 120873 CGCCAATACCAACCGGGCGGTGGCGCATGTTGGACTTGCGC---GCCTCCTCCACGGGGT 120929 Query 244557 AAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCA 244616 | ||||| |||| || |||||||| | ||| ||||| | || | || ||| || Sbjct 120930 AGTAGTTGACGTCAATGACCTTGTTCAAGTTCCGGGTCACCACCTTGGTCACCTCGTACA 120989 Query 244617 GCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTG 244675 || ||| ||| | || | ||| |||||| ||||||| | | Sbjct 120990 GCTTCTGGTAGTTGAACAC-------TCC------------ATCCTCCACAAACTTGGGG 121030 Query 244676 AGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATC 244735 ||||| || ||||||||||| || |||||||| || | ||||||| | |||| Sbjct 121031 AGGGCCACAGACGCCAGGTTGCACACCGCCACCTCATCGGGCGACGTGTACTCCATAATC 121090 Query 244736 TCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTG 244795 ||| ||| | ||| || | ||| ||||| |||| ||| || || |||||| |||| Sbjct 121091 TCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTG 121150 Query 244796 CAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTG 244855 ||||||||||| |||||||| ||| | || ||||| | ||| ||| | |||| | | Sbjct 121151 GCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGCG 121210 Query 244856 TTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTG 244915 ||| || | | || |||| |||| |||| || ||||| |||||| | Sbjct 121211 AACCACAGCTGCTGGGCATTGATCGTCTTGCGCGCGCGCCCCTCCTTCTCGTACTTCTCG 121270 Query 244916 TACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCAC 244975 ||||| | |||||||||| ||||||| ||||| || |||||| | ||||| Sbjct 121271 TACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCCGGGGGCCTCATTGGGGCAG 121330 Query 244976 ATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGG 245035 | || ||||||| |||| | | || | || |||||| || ||||||| ||| || Sbjct 121331 AAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAACAGATCGGGGACCCACAGA 121390 Query 245036 GCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAA 245095 || | ||||||||| | | | ||| || ||| |||||| | |||||||| Sbjct 121391 GCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGCTCCAGG 121450 Query 245096 AAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTG 245155 || || || |||||| ||||||| ||||||| ||||| |||| | ||| |||||| Sbjct 121451 AACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAACGAGCCTTTGCGCTTG 121510 Query 245156 TTGCCTCCCTGGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTAT 245214 |||||||||||||| | | || | | ||||||| | ||| | || | || Sbjct 121511 CCTCCTCCCTGGTCCACATAGCGGGCCGTG-TCATTGAAGACCCTCAGCATGGGGATGAT 121569 Query 245215 GCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGAT 245274 ||||| || ||||| ||||| ||||||| | | || | | || |||| || Sbjct 121570 CCCGTTGGATGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCAT 121629 Query 245275 GGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGC 245334 ||||| | || ||||| |||||||||| ||||| ||||| ||||| Sbjct 121630 ACTAATGCCAATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTA 121689 Query 245335 TATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTT 245394 |||||||| || ||| || |||| ||||| || || || |||||||| || Sbjct 121690 AATGCCCTCAATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACG 121749 Query 245395 GGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGA 245453 || ||| | ||| || || ||||| | ||||| |||||| | | || || | || Sbjct 121750 CGGCGTGCCGGCGTTAAAGAGCGTGGGCGTCGCGTGCGTAAAG-AACATCTGTGACATGA 121808 Query 245454 ACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTC 245512 | | ||||| || || || | ||||| | ||| || ||| || ||| | | Sbjct 121809 GCTCATACGTGTGCAGTGCCGCCTGGATGTCTTGCTTGTGAATACCCAGCGC-CACGCGC 121867 Query 245513 ATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTC-CCTTGAGCATGTAGGAGCG 245571 |||| | |||||||| ||| | | | || | || | || | |||| || Sbjct 121868 ATGATCATCTGCTGGGGGCGCTCCA-CGACCTTTCCGTTCACGCGGAAGAGGTAGCCCCG 121926 Query 245572 CTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGC 245631 ||||||||||||||| || ||||| ||| ||||||| || ||| ||| ||| | Sbjct 121927 CTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTCCCGGTCGTGGATGATGGCCGA 121986 Query 245632 GTCGAGTCTC-TCGGCGTGCTTC-TGACTGACCTCGTAAAACTTTTGCGCTATGAGGGGA 245689 || || ||| || ||||| | | || || | | || | | | || ||||| || Sbjct 121987 GTTAAG-CTCGTCCTTGTGCTCCATCAC-GAGCGCATACACGTCGTCGGCGATGAGCGGC 122044 Query 245690 GCC-CTGAGCCCG--GTGTCCGGATTGACGTTGAACCAGAGCCTC----TTGCACACCTC 245742 ||| | | ||||| | || | || ||| ||| |||| ||| ||| Sbjct 122045 GCCGCGGCGCCCGTCTTCTCGTGCGTGTTCTTGTGGAAGA-CCTCGATGTTG-TCAC--T 122100 Query 245743 CGAGAACTTGGGGCTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAACTT 245802 ||| ||| | | ||| ||| |||||||||| || || ||||||||||||| ||| Sbjct 122101 GAAGACCTT---GTTCGTGTTCTTGTGCAGGTTGGACACGGCGATGCGCGCCGCCAGCTT 122157 Query 245803 GCTGTAGTCGGGGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGCCAGCAGCTCGTCAAT 245862 | | |||| ||||| ||| || || | |||||| | ||| ||||||||| | Sbjct 122158 GGAGAAGTCTGGGTGCTGCGTGCTCTGGTACGCGGCCGTCTCGGCGGCCAGCTCGTCCAG 122217 Query 245863 CTCGGACGT 245871 ||||||||| Sbjct 122218 CTCGGACGT 122226 >seq1932 Length=9237 Score = 394 bits (436), Expect = 2e-104 Identities = 602/848 (71%), Gaps = 15/848 (2%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || || |||||| || Sbjct 839 GATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAGGCGTCGTTCTGGACGGC 780 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | ||||||| | ||| | | ||||| | ||| | || ||||| Sbjct 779 CGAGGAGCTGGACCTGGTGCACGACCTGAAGGACTGGGGGAACCTGACGGACAACGAGCG 720 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| || | || || |||||||| ||| |||||||| || || ||||| Sbjct 719 CCACTTCATCAAGCACGTGCTAGCATTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAA 660 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTACGGCT 42522 |||||| | | |||| || |||||||| || | ||||| |||||||||||||||| Sbjct 659 CCTGGCGATGAACTTCAGCAATGAGGTGCAAGTGCCG-GAGGCTCGCTGCTTCTACGGCT 601 Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582 ||||||| ||||| |||||| | ||||| ||||||||| | ||| || ||||||||| Sbjct 600 TCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACA 541 Query 42583 TCCTGGATCCCGTCGAGCG---TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCA 42639 || ||| |||| ||| | || |||| ||||| |||||||| || ||| Sbjct 540 TCAAGGACGCCGTGGAGAAGGATCACTTGCTGCGT---GCCATCGAGACGATCCCGTGCG 484 Query 42640 TCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCG 42699 | |||||||||| |||||||||||| ||| || || | | | | | | Sbjct 483 TGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGGTGTGACCCTCGTGTTTCGTCCTACCCGG 424 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 || | ||| | || || ||||||| |||||||| ||||||||||| ||||| ||||| Sbjct 423 AGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGCTCCA 364 Query 42760 TCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||||||||| || || || ||||| || || | |||||||||||| |||||| Sbjct 363 TCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCTGGTCTGAGCTTCTCGAACGAGCTCATC 305 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 ||| |||||||||| |||| | |||||| || |||||| ||| ||||| | | | Sbjct 304 AGCCGGGACGAGGGCATGCACACGGACTTCGCGTGCCTCATGTACTCGA---AGTTGGTG 248 Query 42879 CACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 |||||| || || || || | || ||| | || || |||| ||| ||| | Sbjct 247 AACAAGCTGCCGGAGAGCCGCGTGCACGCGATCGTGCGTGACGCTGTGGTGATTGAGCAC 188 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||||| | | | ||||| |||||| ||| ||||||||||| | ||||||||| Sbjct 187 GAGTTCGTGAGCGACTCGCTCCCCGTGGAGCTGATCGGCATGAACTCTGCGCTCATGTGC 128 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC-GCCTCTA 43057 |||||||| ||| ||| ||||||| || |||| | ||||| || || |||| Sbjct 127 CAGTACATCGAGTTCGTGGCCGACCGCCTGCTGTACTCACTGGGT-GCATCCAAGATCTA 69 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | | ||| ||||||| ||||| | |||||| || |||||||||||||||| Sbjct 68 CAACGTGAAGAACCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTT 9 Query 43118 TTTCGAGA 43125 ||||||| Sbjct 8 CTTCGAGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944308792277760