Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2561 316 2e-81 seq1300 311 9e-80 seq1932 306 4e-78 seq2569 159 3e-34 seq2529 145 8e-30 seq2563 118 1e-21 >seq2561 Length=604796 Score = 316 bits (350), Expect = 2e-81 Identities = 553/795 (70%), Gaps = 10/795 (1%) Strand=Plus/Minus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 ||||| | ||||||||||||||||||||| || ||||| | | || | || | | Sbjct 371464 AGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGATC 371405 Query 132781 AGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 || ||| || |||| ||| | | ||| ||| |||| || | || ||||| || Sbjct 371404 AGCTCCACGGGGAGCGAGTCGCTCACGAACTCGT-GCTCAATCACCACAGCGTCACGCAC 371346 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCG-TTG--CACCAAATGCTTGAACATCAAGCA 132896 ||| | | | |||| | | | |||| | ||| |||||| | | | |||| | ||| Sbjct 371345 GAT--CGCGTGCACGCGGCTCTC-CGGCAGCTTGTTCACCAACTTCGAGTACATGAGGCA 371289 Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956 || ||||| |||| ||||||||||| | ||||| ||||| ||| ||| || Sbjct 371288 CGCGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACC 371229 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 |||||||||||||| || |||||||| || |||| | ||| ||||| ||||| | Sbjct 371228 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAAT 371169 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076 |||||| ||||| ||||| |||| ||| ||||| | | | | | | | Sbjct 371168 GCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTCACA 371109 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| |||||||| |||||| | | |||||||| ||||| |||||||| || Sbjct 371108 CCACTTGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAG 371049 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 ||| | ||||| | | | | ||| |||||||| || ||| |||| || Sbjct 371048 CAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTC 370989 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 |||||| | |||||| |||||||| || |||||||| ||||| || ||||| ||| || Sbjct 370988 CGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTTG 370929 Query 133257 CACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGA 133315 ||| || | ||| | ||| |||| || ||||| ||||||||||||||||| |||| Sbjct 370928 CACCTCATTGCTGAAGTTCATCG-CCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 370870 Query 133316 AAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGC 133375 | || |||||||||||||||||||| |||||||||||||| ||| | | ||||||| Sbjct 370869 AGAATGCCAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAGTCCT 370810 Query 133376 GCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | ||| | |||||||| ||||||| | ||||| ||||||||||| || || |||| Sbjct 370809 TCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCTTGT 370750 Query 133436 ACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGC 133495 |||| ||||| ||| | || || || || | ||| |||||| ||||| || Sbjct 370749 ACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCCA 370690 Query 133496 GCAACAGCGGCTCCG 133510 || | |||||||| Sbjct 370689 CCAGGAACGGCTCCG 370675 >seq1300 Length=5041 Score = 311 bits (344), Expect = 9e-80 Identities = 554/796 (70%), Gaps = 12/796 (2%) Strand=Plus/Plus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 ||||| | ||||||||||||||||||||| || ||||| | | || | || | | Sbjct 1814 AGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGATC 1873 Query 132781 AGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 || ||| || |||| ||| | | ||| ||| |||| || | || ||||| || Sbjct 1874 AGCTCCACGGGGAGCGAGTCGCTCACGAACTCGT-GCTCAATCACCACAGCGTCACGCAC 1932 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCG-TTG--CACCAAATGCTTGAACATCAAGCA 132896 ||| | | | |||| | | | |||| | ||| |||||| | | | |||| | ||| Sbjct 1933 GAT--CGCGTGCACGCGGCTCTC-CGGCAGCTTGTTCACCAACTTCGAGTACATGAGGCA 1989 Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956 || ||||| |||| ||||||||||| | ||||| ||||| ||| ||| || Sbjct 1990 CGCGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACC 2049 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 |||||||||||||| || |||||||| || |||| | ||| ||||| ||||| | Sbjct 2050 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAAT 2109 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076 |||||| ||||| ||||| |||| ||| ||||| | | | | | | | Sbjct 2110 GCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTCACA 2169 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| |||||||| |||||| | | |||||||| ||||| |||||||| || Sbjct 2170 CCACTTGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAG 2229 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 ||| | ||||| | | | | ||| |||||||| || ||| |||| || Sbjct 2230 CAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTC 2289 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 |||||| | |||||| |||||||| || |||||||| ||||| || ||||| ||| || Sbjct 2290 CGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTTG 2349 Query 133257 CACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGA 133315 ||| || | ||| | ||| |||| || ||||| ||||||||||||||||| |||| Sbjct 2350 CACCTCATTGCTGAAGTTCATCG-CCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 2408 Query 133316 AAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGC 133375 | || |||||||||||||||||||| |||||||||||||| ||| | | ||||||| Sbjct 2409 AGAATGCCAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAGTCCT 2468 Query 133376 GCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | ||| | |||||||| ||||||| | ||||| ||||||||||| || || |||| Sbjct 2469 TCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCTTGT 2528 Query 133436 ACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGC 133495 |||| ||||| ||| | || || || || | ||| || ||| ||||| || | Sbjct 2529 ACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAATCGGTTCGGGTTCTC-C 2587 Query 133496 GCAA-CAGCGGCTCCG 133510 ||| | |||||||| Sbjct 2588 ACAAGGAACGGCTCCG 2603 >seq1932 Length=9237 Score = 306 bits (338), Expect = 4e-78 Identities = 553/796 (69%), Gaps = 12/796 (2%) Strand=Plus/Plus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 ||||| | ||||||||||||||||||||| || ||||| | | || | || | | Sbjct 96 AGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGATC 155 Query 132781 AGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 || ||| || |||| ||| | | ||| ||| |||| || | || ||||| || Sbjct 156 AGCTCCACGGGGAGCGAGTCGCTCACGAACTCGT-GCTCAATCACCACAGCGTCACGCAC 214 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCG-TTG--CACCAAATGCTTGAACATCAAGCA 132896 ||| | | | |||| | | | |||| | ||| |||||| | | | |||| | ||| Sbjct 215 GAT--CGCGTGCACGCGGCTCTC-CGGCAGCTTGTTCACCAACTTCGAGTACATGAGGCA 271 Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956 || ||||| |||| ||||||||||| | ||||| ||||| ||| ||| || Sbjct 272 CGCGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACC 331 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 |||||||||||||| || |||||||| || |||| | ||| ||||| ||||| | Sbjct 332 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAAT 391 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076 |||||| ||||| ||||| |||| ||| ||||| | | | | | | | Sbjct 392 GCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTCACA 451 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| |||||||| |||||| | | |||||||| ||||| |||||||| || Sbjct 452 CCACTTGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAG 511 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 ||| | ||||| | | | | ||| |||||||| || ||| |||| || Sbjct 512 CAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTC 571 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 |||||| | |||||| |||||||| || |||||||| ||||| || ||||| ||| || Sbjct 572 CGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTTG 631 Query 133257 CACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGA 133315 ||| || | ||| | ||| |||| || ||||| ||||||||||||||||| |||| Sbjct 632 CACCTCATTGCTGAAGTTCATCG-CCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 690 Query 133316 AAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGC 133375 | || || ||||||||||||||||| |||||||||||||| ||| | | ||||||| Sbjct 691 AGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAGTCCT 750 Query 133376 GCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | ||| | |||||||| ||||||| | ||||| ||||||||||| || || |||| Sbjct 751 TCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCTTGT 810 Query 133436 ACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGC 133495 |||| ||||| ||| | || || || || | ||| || ||| ||||| || | Sbjct 811 ACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAATCGGTTCGGGTTCTC-C 869 Query 133496 GCAA-CAGCGGCTCCG 133510 ||| | |||||||| Sbjct 870 ACAAGGAACGGCTCCG 885 >seq2569 Length=732260 Score = 159 bits (176), Expect = 3e-34 Identities = 178/235 (76%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 || || ||||| || ||||| || ||| | |||||||| |||||||| | ||||| ||| Sbjct 55045 AAGAACATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAG 55104 Query 38298 GCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356 | | ||| | | | |||| | || | ||||||| ||||| ||||| || || | Sbjct 55105 CCTTCGGACTCCATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCC 55163 Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416 |||||| ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||| Sbjct 55164 CGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGA 55223 Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||||| ||||| | |||||||| |||||||||||| || | || ||| Sbjct 55224 CTACAACATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGC 55278 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | |||||||| |||||||| | ||||| ||| | | Sbjct 55279 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 55338 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | |||| | || | ||||||| ||||| ||||| || || ||||||| Sbjct 55339 GACTCCATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 55397 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 55398 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 55457 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | |||||||| |||||||||||| || | || ||| Sbjct 55458 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGC 55506 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | |||||||| |||||||| | ||||| ||| | | Sbjct 55507 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 55566 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | |||| | || | ||||||| ||||| ||||| || || ||||||| Sbjct 55567 GACTCCATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 55625 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 55626 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 55685 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | |||||||| |||||||||||| | | ||||| Sbjct 55686 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTTCGCGGCGG 55733 >seq2529 Length=382763 Score = 145 bits (160), Expect = 8e-30 Identities = 175/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || | |||||||| || |||||| | ||||| ||| | Sbjct 60810 AAGATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCG 60751 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358 | ||| | | |||| | || | ||||| | ||||| || || || |||||| | Sbjct 60750 TCGGACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCAT-CCCGCCTG 60693 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| || |||| ||| ||||| ||||| || |||| ||||| || | ||||| Sbjct 60692 ACCAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACT 60633 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| |||||| | |||||||| ||||||||||| || | |||||| Sbjct 60632 ACAACATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 60580 Score = 140 bits (154), Expect = 3e-28 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| || |||||| | ||||| ||| | | Sbjct 60351 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 60292 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | ||||| | ||||| || || || |||||| |||| Sbjct 60291 GACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCAT-CCCGCCTGACC 60234 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| ||| ||||| ||||| || |||| ||||| || | |||||||| Sbjct 60233 AGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACA 60174 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | |||||||| ||||||||||| || | |||||| Sbjct 60173 ACATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 60124 Score = 134 bits (148), Expect = 1e-26 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | |||||||| || |||||| | ||||| ||| | | Sbjct 60123 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 60064 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | ||||| | ||||| || || || |||||| |||| Sbjct 60063 GACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCAT-CCCGCCTGACC 60006 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| ||| ||||| ||||| || |||| ||||| || | |||||||| Sbjct 60005 AGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACA 59946 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | |||||||| ||||||||||| || | |||||| Sbjct 59945 ACATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 59896 Score = 134 bits (148), Expect = 1e-26 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | |||||||| || |||||| | ||||| ||| | | Sbjct 60579 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCA 60520 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | ||||| | ||||| || || || |||||| |||| Sbjct 60519 GACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCAT-CCCGCCTGACC 60462 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| ||| ||||| ||||| || |||| ||||| || | |||||||| Sbjct 60461 AGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACA 60402 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | |||||||| ||||||||||| || | |||||| Sbjct 60401 ACATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 60352 Score = 132 bits (146), Expect = 5e-26 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | |||||||| || |||||| | ||||| ||| | | Sbjct 59895 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 59836 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | ||||| | ||||| || || || |||||| |||| Sbjct 59835 GACTCGATCGACAACG-TGAAGCAGAAAATTCAGGACAAGGAAGGCAT-CCCGCCTGACC 59778 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| ||| ||||| ||||| || |||| ||||| || | |||||||| Sbjct 59777 AGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACA 59718 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| | |||||||| ||||||||||| || | ||||| Sbjct 59717 ACATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 59669 >seq2563 Length=678508 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| |||||||| | ||||| ||| | || Sbjct 614706 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTAGAGCCGTCC 614647 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||||| | | | | || | ||||||| ||||| || || ||||| | ||||| Sbjct 614646 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCAG 614587 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || |||| ||||| ||| ||||||||| Sbjct 614586 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 614527 Query 38424 ATCCAAAAGG 38433 ||||| |||| Sbjct 614526 ATCCAGAAGG 614517 Score = 95.1 bits (104), Expect = 1e-14 Identities = 98/126 (78%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405 ||||| ||| | ||||| ||||| || || | ||| ||||| |||||||| |||| ||| Sbjct 195365 GGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGC 195424 Query 38406 ACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAG 38464 || || ||||||||||| || ||||| ||| |||||||| ||||||||||| || | Sbjct 195425 ACTCTTTCGGACTACAACATTCAGAAGGAGAGC-ACGCTGCACCTGGTGCTGCGTCTGCG 195483 Query 38465 AGGCGG 38470 || || Sbjct 195484 TGGTGG 195489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500156694435840