Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2516 444 6e-120 seq2561 190 2e-43 seq1300 190 2e-43 seq1932 165 8e-36 seq2569 145 7e-30 seq2529 145 7e-30 seq2563 131 2e-25 >seq2516 Length=319815 Score = 444 bits (492), Expect = 6e-120 Identities = 1227/1851 (66%), Gaps = 66/1851 (4%) Strand=Plus/Plus Query 147953 GCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGACGA 148012 ||||| |||||||||||||||||||| ||| | ||| |||||| ||||| |||| Sbjct 120163 GCGCATGTAGTACATGCCCGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATGGACGT 120222 Query 148013 CATGAGCGTG-TA--CGTCGGGTGCGGCACAAACAGA---TTAAACGACTGGCTCTGGTC 148066 || || || || |||||||| ||||| | || || | ||||||||||||| Sbjct 120223 CA---GCTTGCTAATCGTCGGGT-CGGCA--ATGTGAATGTTCAGCGACTGGCTCTGGCA 120276 Query 148067 AATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGC 148126 |||| | ||||||||||| || | || || | | ||| ||| |||||||| | Sbjct 120277 AATGTAGGCGCCACGGTCCGCCGACAGGTCCAACACGGCCTTCTGCTTGATCTCCCACAC 120336 Query 148127 CGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCG 148186 |||||||||| | ||||| || || |||||| | | |||||| ||||| | Sbjct 120337 CGTCTTGTACTTCTCCTTGACCTGGTCCGGAATGGATTTCACCTTCTGCACGGAGCCACC 120396 Query 148187 GTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATC 148246 || || | |||||| ||||||| || ||| | | | ||||||||||| || | Sbjct 120397 GTCAGCCAGAATCTGGTTGCGCACCTCAGGCGTCCAGATGCCCAGCTCGATCAGCTCCTT 120456 Query 148247 GATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTT 148306 || || |||| ||||| | | ||||| || || |||||||| || |||| ||| Sbjct 120457 CATGAGGTACTTGTTCACGATCGTGAACTCACCAGCCAGCACGCGGCGGTTGTACATGTT 120516 Query 148307 GCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGG 148366 ||| |||| || | ||||| ||||||||||||||||| || |||| || ||||| Sbjct 120517 CGACGTGTACGGCTCGATGGACTCATTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGG 120576 Query 148367 CATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGC 148426 ||| || || || ||||||||||| | ||| | || | | || ||| || || Sbjct 120577 CATCGGAGCCACGAGGAGCGAGTTGCGGATGCCGTGCTTGATCACGTTCTCCTTGAGCGC 120636 Query 148427 CGCCCAGTCCCAGAG---CGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCC 148483 ||||| ||||| | || ||||| || ||| |||||||||| |||| | || || Sbjct 120637 AGCCCAATCCCACAAGCCCGAAGACGGGGTGACGCCCCACATGTCGAACTGGAAGATACC 120696 Query 148484 GCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCA 148543 ||| || || |||| | ||| |||||| || || || || | || || Sbjct 120697 CTTGCTGGCAGGCGATCCCTGGAACGTCTCGTACGGGCCCAGCTCCTTGGCGATCTC-CA 120755 Query 148544 GCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAG--CAGCGC 148600 | | ||| | | ||||||| ||||| ||| || | | ||||||| || | Sbjct 120756 TCGAGGTCTCCATAGAAGCGTAGTAGATCGTTTCGAAGATGTTCATGTTGAGTTCACGG- 120814 Query 148601 CGCCGACTCGCTTTCGTACGGCATACG-CAGCCGCACAAACGCGTCGGCAAGGCCCTGTA 148659 || | ||| ||| ||| |||| || | | ||| || || || || ||||| | Sbjct 120815 -GCTTGCGGGCTCTCGAACG-CATAGTTCATGAGGATAAATGCATCCGCGAGACCCTGGA 120872 Query 148660 CGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGT 148719 |||| | |||| || ||||| |||||||| |||||| ||| | || |||| Sbjct 120873 CGCCAATACCAACCGGGCGGTGGCGCATGTTGGACTTGCGCGCCTCCTCCACGGGGTAGT 120932 Query 148720 GGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGC 148778 |||| ||| |||| ||||| |||| || || ||||||||| || | | |||| Sbjct 120933 AGTTGACGTCAATGACCTTGTTCAAG-TTCCGGGTCACCACCTTGGTCACCTCGTACAGC 120991 Query 148779 AATTCAAAATCGTACTTG---------TCATCTACGATGCATCGGTTCACGGCGATAGAG 148829 ||| | ||| ||| || || || | | | || | ||| | ||| Sbjct 120992 --TTC----TGGTAGTTGAACACTCCATCCTCCACAAA-CTTGGGG--AGGGCCACAGAC 121042 Query 148830 GCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGA 148889 || || |||||||| ||| |||||| || | ||||||| | |||||| ||||| Sbjct 121043 GCCAGGTTGCACACCGCCACCTCATCGGGCGACGTGTACTCCATAATCTCGCAGCACAAG 121102 Query 148890 TTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTG 148949 ||||| | |||| ||| | ||||| || || ||||| |||| |||||||||| Sbjct 121103 TTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTG 121162 Query 148950 TACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG---AACCGATGCAGG 149006 ||||||||| |||| |||| || || | ||||| |||| ||| |||| ||| Sbjct 121163 TACAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGCGAACCA---CAGC 121219 Query 149007 TCCTGCGCGCGCA-CTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCG 149065 | ||| || | | | ||| || ||| ||||||| |||||| ||||| Sbjct 121220 TGCTGGGCATTGATCGTCTTGCGCGC-GCGCCCCTCCTTCTCGTACTTCTCGTACAGAGT 121278 Query 149066 CTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGA 149125 ||||||| | ||||| |||| |||| ||| |||||| || | ||||| | || Sbjct 121279 CTCGAACTCGTCGCCCCAGCACTCGTAGAGTCCGGGGGCCTCATTGGGGCAGAAAAGGCT 121338 Query 149126 CCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACAT 149185 |||| ||||| ||| | ||| |||||||| ||||||||||| ||||| || ||||| | Sbjct 121339 CCACTTGCCGTTCGCTTCCACACGCTTCATGAACAGATCGGGGACCCACAGAGCGTAGAA 121398 Query 149186 GAGGT--CGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTG 149243 ||||| ||||||| ||||| ||| ||| ||| |||||| | || | | Sbjct 121399 GAGGTCGCGCGCGCGGTGCAG--CTCGTTGCCGTGGTTCTTGCGCAGCTCCAGGAACTCG 121456 Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCG 149300 || | ||| |||||||||||||| | ||| | |||| || ||| ||||||||| || Sbjct 121457 AACACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAACGAGCCTTTGCGCTTGCCTCCT 121516 Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360 |||||||| || | ||| || ||| || || || | | ||| || || || || Sbjct 121517 CCCTGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGTTG 121576 Query 149361 GCAGTGCCGTTAGTAGAGCTAATGCGACTG-CCGCGCGCTCGCACTTTGTGCACGTTGAC 149419 | | ||||| || || ||| ||| || | || || | ||||||| | | Sbjct 121577 GATGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTG-GCGCGGATGTTGTGCATACTAAT 121635 Query 149420 GCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCC 149479 ||| || || ||| | |||| |||||| |||||| | |||||| ||| ||||| Sbjct 121636 GCCAATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCC 121695 Query 149480 CTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGT 149539 ||| || |||| || ||||| |||||| || ||||| ||| |||||| |||| Sbjct 121696 CTCAATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGT 121755 Query 149540 GCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTA 149599 |||||| || | ||||| | ||||| ||||| | |||| ||| | ||| || Sbjct 121756 GCCGGCGTTAAAGAGCGTGGGCGTCGCGTGCGTAAAGAACATCTGTGACATGAGCTCATA 121815 Query 149600 CGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCAT 149659 || | || | | ||||| | || || || | || |||||||| | ||| Sbjct 121816 CGTGTGCAGTGCCGCCTGGATGTCTTGCTTGTGAATACCCAGCGCCACGCGCATGATCAT 121875 Query 149660 ATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAA---GTAGCCGTTTTCTAG 149716 ||||| || |||||| | || ||||| | | | || |||||| || || Sbjct 121876 CTGCTGGGGGCGCTCCACGAC---CTTTCCGTTCACGCGGAAGAGGTAGCCCCGCTCGAG 121932 Query 149717 TGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 |||||| |||| ||||| | ||| |||||||| ||| ||||| ||||| Sbjct 121933 CGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTCCCGGTCGTGGATGATGGC 121983 >seq2561 Length=604796 Score = 190 bits (210), Expect = 2e-43 Identities = 512/769 (67%), Gaps = 23/769 (3%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||||| ||||| ||||| || ||||| || ||||||| || ||| || | | ||| Sbjct 371576 GTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATATCCAT 371517 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACT--GTACGAGCAGT 120471 | ||||||||||| || |||| || || | || || || | | |||| ||||| Sbjct 371516 CCAGTCGAACGGGTTCTTCACGTTGTAG-ATCTTGGATGCACCCAGTGAGTAC-AGCAGG 371459 Query 120472 CGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCC 120531 ||||| || || ||||| ||||||| ||||||| | | ||||||||| | || | || Sbjct 371458 CGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGATCAGCTCC 371399 Query 120532 ACCGGCAACGCCGACG-TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || || | || | || | | ||||| | |||||| |||| || || | || || Sbjct 371398 ACGGGGAGCG-AGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTCACGCACGATCGC 371340 Query 120591 GAGCATAGTGTGGC---CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTAC---AGGCA 120644 | ||| | ||| | |||| || ||||| | |||| ||||| ||||| Sbjct 371339 GTGCA---CGCGGCTCTCCGGCAGCT--TGTTC--ACCAACTTCG--AGTACATGAGGCA 371289 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 ||| ||||||||||||| ||||||||| || || |||||||| || |||| || Sbjct 371288 CGCGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACC 371229 Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764 ||||||| ||| | |||||| |||| |||| | ||| ||||| ||||| | Sbjct 371228 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAAT 371169 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824 |||||||||| ||| || || | || ||||| | | | || ||| Sbjct 371168 GCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTCACA 371109 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAG 120884 |||||| | ||||| |||||| || ||||||||| ||| ||||| || ||| Sbjct 371108 CCACTTGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAG 371049 Query 120885 CAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTC 120944 || || ||| | | ||| || | | ||| ||||| ||||| || Sbjct 371048 CAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTC 370989 Query 120945 CGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGG 121004 || ||| | | |||||| | || | ||| ||| | | |||||| || | | Sbjct 370988 CGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTTG 370929 Query 121005 CACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGA 121063 |||| | |||| | | ||| ||||| |||||||| | |||| ||| |||| Sbjct 370928 CACCTCATTGCTGAAGTTCATCG-CCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 370870 Query 121064 AGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTT 121112 |||| ||||||||||||||||| ||||| ||||||| |||||| || || Sbjct 370869 AGAATGCCAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTT 370821 >seq1300 Length=5041 Score = 190 bits (210), Expect = 2e-43 Identities = 512/769 (67%), Gaps = 23/769 (3%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||||| ||||| ||||| || ||||| || ||||||| || ||| || | | ||| Sbjct 1702 GTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATATCCAT 1761 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACT--GTACGAGCAGT 120471 | ||||||||||| || |||| || || | || || || | | |||| ||||| Sbjct 1762 CCAGTCGAACGGGTTCTTCACGTTGTAG-ATCTTGGATGCACCCAGTGAGTAC-AGCAGG 1819 Query 120472 CGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCC 120531 ||||| || || ||||| ||||||| ||||||| | | ||||||||| | || | || Sbjct 1820 CGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGATCAGCTCC 1879 Query 120532 ACCGGCAACGCCGACG-TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || || | || | || | | ||||| | |||||| |||| || || | || || Sbjct 1880 ACGGGGAGCG-AGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTCACGCACGATCGC 1938 Query 120591 GAGCATAGTGTGGC---CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTAC---AGGCA 120644 | ||| | ||| | |||| || ||||| | |||| ||||| ||||| Sbjct 1939 GTGCA---CGCGGCTCTCCGGCAGCT--TGTTC--ACCAACTTCG--AGTACATGAGGCA 1989 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 ||| ||||||||||||| ||||||||| || || |||||||| || |||| || Sbjct 1990 CGCGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACC 2049 Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764 ||||||| ||| | |||||| |||| |||| | ||| ||||| ||||| | Sbjct 2050 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAAT 2109 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824 |||||||||| ||| || || | || ||||| | | | || ||| Sbjct 2110 GCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTCACA 2169 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAG 120884 |||||| | ||||| |||||| || ||||||||| ||| ||||| || ||| Sbjct 2170 CCACTTGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAG 2229 Query 120885 CAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTC 120944 || || ||| | | ||| || | | ||| ||||| ||||| || Sbjct 2230 CAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTC 2289 Query 120945 CGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGG 121004 || ||| | | |||||| | || | ||| ||| | | |||||| || | | Sbjct 2290 CGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTTG 2349 Query 121005 CACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGA 121063 |||| | |||| | | ||| ||||| |||||||| | |||| ||| |||| Sbjct 2350 CACCTCATTGCTGAAGTTCATCG-CCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 2408 Query 121064 AGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTT 121112 |||| ||||||||||||||||| ||||| ||||||| |||||| || || Sbjct 2409 AGAATGCCAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTT 2457 >seq1932 Length=9237 Score = 165 bits (182), Expect = 8e-36 Identities = 495/752 (66%), Gaps = 23/752 (3%) Strand=Plus/Plus Query 120371 TCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTGC 120430 |||| || ||||| || ||||||| || ||| || | | ||| | ||||||||||| Sbjct 1 TCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATATCCATCCAGTCGAACGGGTTCT 60 Query 120431 TCGCGTTAAAGTATTTCGGCTGGCCCAACTG--TACGAGCAGTCGGTCCGCTACAAACTC 120488 || |||| || || | || || || | || ||| ||||| ||||| || || ||||| Sbjct 61 TCACGTTGTAG-ATCTTGGATGCACCCAGTGAGTAC-AGCAGGCGGTCGGCCACGAACTC 118 Query 120489 AATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGCCGACG- 120547 ||||||| ||||||| | | ||||||||| | || | |||| || | || | || Sbjct 119 GATGTACTGGCACATGAGCGCAGAGTTCATGCCGATCAGCTCCACGGGGAGCGA-GTCGC 177 Query 120548 TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGCATAGTGTGGC--- 120604 | | ||||| | |||||| |||| || || | || ||| ||| | ||| Sbjct 178 TCACGAACTCGTGCTCAATCACCACAGCGTCACGCACGATCGCGTGCAC---GCGGCTCT 234 Query 120605 CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCA 120661 | |||| ||||| | | |||| |||||| ||||||| ||||||||||||| Sbjct 235 CCGGCAGCTTGTTCACCAAC----TTCG--AGTACATGAGGCACGCGAAGTCCGTGTGCA 288 Query 120662 GGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCG 120721 ||||||||| || || |||||||| || |||| || ||||||| ||| | Sbjct 289 TGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGGCATGAGGCCGCGCT 348 Query 120722 TCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAA 120781 |||||| |||| |||| | ||| ||||| ||||| | |||||||||| ||| | Sbjct 349 TCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCCCTCCACGGCGGCGA 408 Query 120782 AGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCATGGCCCACT 120841 | || | || ||||| | | | || ||| |||||| | ||||| Sbjct 409 ACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTCACACCACTTGAGCGCCCAGC 468 Query 120842 CGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCATGTCGCGCTCGC 120901 |||||| || ||||||||| ||| ||||| || ||||| || ||| Sbjct 469 GGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCAAGTGATCCTTCTCCA 528 Query 120902 CCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCGTGTGCACGCACTCGA 120961 | | ||| || | | ||| ||||| ||||| |||| ||| | | ||||| Sbjct 529 CGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTCCGAGTGGATGTTCTCGA 588 Query 120962 TCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGGCACCGC-CCGCTGCATG 121020 | | || | ||| ||| | | |||||| || | ||||| | |||| | Sbjct 589 TGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTTGCACCTCATTGCTGAAGT 648 Query 121021 TACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGC 121080 | ||| ||||| |||||||| | |||| ||| |||||||| || ||||||||| Sbjct 649 TCATCG-CCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGAAGAATGCTAGCACGTGC 707 Query 121081 TTGATAAAGTGTCGCTCGTCGTCCGTGAGCTT 121112 ||||| ||||| ||||||| |||||| || || Sbjct 708 TTGATGAAGTGGCGCTCGTTGTCCGTCAGGTT 739 >seq2569 Length=732260 Score = 145 bits (160), Expect = 7e-30 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 55247 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCCAGCTGCTTGCC 55189 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||||||||| |||||||| |||||||| ||| || ||||| Sbjct 55188 GGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCTTGGATTTTCTGCTT 55129 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | | ||| | ||||||||||| | |||| ||| ||||| |||| || Sbjct 55128 CACGTTGTCGATGGAGTCCGAAGGCTCCACGTCCAGCGTGATGGTCTTGCCCGTCAACGT 55069 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 55068 CTTCACGAAGATCTGCATG 55050 Score = 145 bits (160), Expect = 7e-30 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 55475 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCCAGCTGCTTGCC 55417 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||||||||| |||||||| |||||||| ||| || ||||| Sbjct 55416 GGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCTTGGATTTTCTGCTT 55357 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | | ||| | ||||||||||| | |||| ||| ||||| |||| || Sbjct 55356 CACGTTGTCGATGGAGTCCGAAGGCTCCACGTCCAGCGTGATGGTCTTGCCCGTCAACGT 55297 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 55296 CTTCACGAAGATCTGCATG 55278 Score = 145 bits (160), Expect = 7e-30 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 55703 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCCAGCTGCTTGCC 55645 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||||||||| |||||||| |||||||| ||| || ||||| Sbjct 55644 GGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCTTGGATTTTCTGCTT 55585 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | | ||| | ||||||||||| | |||| ||| ||||| |||| || Sbjct 55584 CACGTTGTCGATGGAGTCCGAAGGCTCCACGTCCAGCGTGATGGTCTTGCCCGTCAACGT 55525 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 55524 CTTCACGAAGATCTGCATG 55506 >seq2529 Length=382763 Score = 145 bits (160), Expect = 7e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| |||| || |||| ||| || ||||||||||| Sbjct 60155 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCTTCAAGCTGCTTGCCA 60214 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| || ||||||||||||||||| || || ||||| Sbjct 60215 GCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATTTTCTGCTTC 60274 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| | ||||||||||| | ||||| || ||||| |||| ||| Sbjct 60275 ACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAAGGTGATCGTCTTGCCCGTCAAAGTC 60334 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 60335 TTCACGAAGATCTGCATG 60352 Score = 141 bits (156), Expect = 9e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| |||| || |||| ||| || ||||||||||| Sbjct 59699 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCTTCAAGCTGCTTGCCA 59758 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| || ||||||||||||||||| || || ||||| Sbjct 59759 GCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATTTTCTGCTTC 59818 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| | ||||||||||| | ||||| || ||||| |||| ||| Sbjct 59819 ACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAAGGTGATCGTCTTGCCCGTCAAAGTC 59878 Query 133644 TTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 59879 TTCACAAAGATCTGCATG 59896 Score = 141 bits (156), Expect = 9e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| |||| || |||| ||| || ||||||||||| Sbjct 59927 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCTTCAAGCTGCTTGCCA 59986 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| || ||||||||||||||||| || || ||||| Sbjct 59987 GCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATTTTCTGCTTC 60046 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| | ||||||||||| | ||||| || ||||| |||| ||| Sbjct 60047 ACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAAGGTGATCGTCTTGCCCGTCAAAGTC 60106 Query 133644 TTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 60107 TTCACAAAGATCTGCATG 60124 Score = 141 bits (156), Expect = 9e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| |||| || |||| ||| || ||||||||||| Sbjct 60383 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCTTCAAGCTGCTTGCCA 60442 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| || ||||||||||||||||| || || ||||| Sbjct 60443 GCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATTTTCTGCTTC 60502 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| | ||||||||||| | ||||| || ||||| |||| ||| Sbjct 60503 ACGTTGTCGATCGAGTCTGACGGCTCCACGTCCAAGGTGATCGTCTTGCCCGTCAAAGTC 60562 Query 133644 TTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 60563 TTCACAAAGATCTGCATG 60580 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || ||||| || ||||| |||| || |||| ||| || ||||||||||| Sbjct 60611 GTAGATTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCTTCAAGCTGCTTGCCA 60670 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| || ||||||||||||||||| || || ||||| Sbjct 60671 GCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATTTTCTGCTTC 60730 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| | ||||||||||| | ||||| || ||||| |||| ||| Sbjct 60731 ACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAAGGTGATCGTCTTGCCCGTCAAAGTC 60790 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 60791 TTCACGAAGATCTGCAT 60807 >seq2563 Length=678508 Score = 131 bits (144), Expect = 2e-25 Identities = 123/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || || ||||||||||| || || ||||||||||| Sbjct 614551 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCTT 614610 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||||||| | |||| |||||| ||||| ||||| | |||| Sbjct 614611 GTCCTGGATTTTCTGCTTGACATTGTCAATGCTGTCGGACGGCTCTACGTCCAGCGTGAT 614670 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| ||||| ||||| || || || || ||||||||| Sbjct 614671 GGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 614707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483405233850240