Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2561 352 4e-91 seq1932 347 2e-89 seq1300 347 2e-89 seq2516 210 3e-48 seq2573 194 2e-43 seq2518 149 9e-30 seq2483 105 1e-16 seq2526 104 3e-16 seq2553 96.9 5e-14 seq2528 91.5 2e-12 >seq2561 Length=604796 Score = 352 bits (390), Expect = 4e-91 Identities = 442/596 (74%), Gaps = 8/596 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||| | ||| || ||||||||||| || || |||||||| |||| | || Sbjct 370677 GAGCCGTTCCTGGTGGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 370736 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 | ||| | |||||| || ||||| ||||| || || ||||| ||||||||| | ||||| Sbjct 370737 GTGTGGCAGATGTAC-AAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCT 370795 Query 1455836 CGGCGC-CGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGC 1455894 || || |||| | |||||| | |||| ||| |||||||||| |||||||||| Sbjct 370796 -GGTGCACGACCTGAAGGACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAGC 370854 Query 1455895 ACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGC 1455954 |||| || || || || ||| |||||||| ||||||||| |||||||||||| | Sbjct 370855 ACGTGCTGGCATTCTT-CGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCGATGAAC 370913 Query 1455955 TTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATC 1456014 || | || ||||| ||| |||| ||||| || | || ||||| ||||||||||||||| Sbjct 370914 TTCAGCAATGAGGTGCAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATC 370973 Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||||||||| || |||||||| ||||||||||| ||| |||||||| | || Sbjct 370974 GAGAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTG 371033 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134 |||||||| ||| | | || |||||||| ||| | |||| ||| ||| |||||| | Sbjct 371034 GAGAAGGATCACTTGCTGCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGC 371093 Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCT 1456194 |||||| | |||||| || | | ||| | || | ||||| || | | | Sbjct 371094 TGGGCGCTCAAGTGGTGTGAC-CCTCGTGTTTCGTC-CTACCCGGAGCGTCTGCTGGCGT 371151 Query 1456195 TTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 | |||| ||| |||||||| || |||||||| |||||| ||||||| |||||||||| Sbjct 371152 TCGCCGCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGA 371211 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 |||||||||||||||| |||| | |||| ||||| | ||||| || ||||| Sbjct 371212 AGCGCGGCCTCATGCCTGGTC-TGAGCTTCTCGAACGAGCTCATCAGCCGGGACGA 371266 Score = 161 bits (178), Expect = 1e-33 Identities = 240/327 (73%), Gaps = 14/327 (4%) Strand=Plus/Plus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCG-ACCGAC 1456510 ||||| ||||| || || || | ||| ||| | | || ||||||| | || | | | Sbjct 371272 TGCACACGGACTTCGCGTGCCTCATGTACTCGAAGTTGGTGAACAAGCTGCCGGAGAGCC 371331 Query 1456511 GTGCCCAAGCAGATCAT-CGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTC 1456569 | | || || |||| | ||| || || || | ||| ||| | ||||| || ||||| || Sbjct 371332 GCGTGCACGC-GATCGTGCGT-GACGCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTC 371389 Query 1456570 GCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTT 1456629 ||| || |||| ||| |||||||||||| | ||||||||||||||||||| | | || Sbjct 371390 GCTCCCCGTGGAGCTGATCGGCATGAAC-TCTGCGCTCATGTGCCAGTACATCG-AGTTC 371447 Query 1456630 GTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGGCCAA 1456686 || |||||||||||||| | || || ||| ||| |||| || || | || Sbjct 371448 GTGGCCGACCGCCTGCTGTACTCACT-GGGTGCATCCAAGATCTACAACGTGAAG---AA 371503 Query 1456687 CCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCG 1456746 ||||||| |||||||| |||||||||| |||||||||||||||| |||||| || Sbjct 371504 CCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAGCG 371563 Query 1456747 CGT-GGCGAGTACGCCAAGGCCGGCGT 1456772 ||| ||||||||| ||||||| || || Sbjct 371564 CGTGGGCGAGTACTCCAAGGCTGGTGT 371590 >seq1932 Length=9237 Score = 347 bits (384), Expect = 2e-89 Identities = 432/581 (74%), Gaps = 8/581 (1%) Strand=Plus/Minus Query 1455731 GATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTAC 1455790 || ||||||||||| || || |||||||| |||| | || | ||| | |||||| Sbjct 868 GAGAACCCGAACCGATTCGTGCTGTTCCCGATCCAGGAGCACGACGTGTGGCAGATGTAC 809 Query 1455791 CAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGC-CGACACGG 1455849 || ||||| ||||| || || ||||| ||||||||| | ||||| || || |||| | Sbjct 808 -AAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCT-GGTGCACGACCTGA 751 Query 1455850 TCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTT 1455909 |||||| | |||| ||| |||||||||| |||||||||||||| || || || | Sbjct 750 AGGACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAGCACGTGCTAGCATTCT 691 Query 1455910 TTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTC 1455969 | ||| |||||||| ||||||||| |||||||||||| ||| | || ||||| Sbjct 690 T-CGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCGATGAACTTCAGCAATGAGGTG 632 Query 1455970 CAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCT 1456029 ||| |||| ||||| || | || ||||| ||||||||||||||||| ||||||||||| Sbjct 631 CAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCG 572 Query 1456030 GAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTC 1456089 || |||||||| ||||||||||| ||| |||||||| | || |||||||| ||| | Sbjct 571 GAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTGGAGAAGGATCACTTG 512 Query 1456090 TTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGG 1456149 | || |||||||| ||| | |||| ||| ||| |||||| ||||||| | |||||| Sbjct 511 CTGCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGG 452 Query 1456150 ATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGG 1456208 || | | ||| | || | ||||| || | | || |||| ||| |||| Sbjct 451 TGTGAC-CCTCGTGTTTCGTC-CTACCCGGAGCGTCTGCTGGCGTTCGCCGCCGTGGAGG 394 Query 1456209 GCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGC 1456268 |||| || |||||||| |||||| ||||||| ||||||||||||||||||||||||| Sbjct 393 GCATTTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGC 334 Query 1456269 CCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 | |||| | |||| ||||| | ||||| || ||||| Sbjct 333 CTGGTC-TGAGCTTCTCGAACGAGCTCATCAGCCGGGACGA 294 Score = 138 bits (152), Expect = 2e-26 Identities = 215/295 (73%), Gaps = 13/295 (4%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCG-ACCGAC 1456510 ||||| ||||| || || || | ||| ||| | | || ||||||| | || | | | Sbjct 288 TGCACACGGACTTCGCGTGCCTCATGTACTCGAAGTTGGTGAACAAGCTGCCGGAGAGCC 229 Query 1456511 GTGCCCAAGCAGATCAT-CGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTC 1456569 | | || || |||| | ||| || || || | ||| ||| | ||||| || ||||| || Sbjct 228 GCGTGCACGC-GATCGTGCGT-GACGCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTC 171 Query 1456570 GCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTT 1456629 ||| || |||| ||| |||||||||||| | ||||||||||||||||||| | | || Sbjct 170 GCTCCCCGTGGAGCTGATCGGCATGAAC-TCTGCGCTCATGTGCCAGTACATCG-AGTTC 113 Query 1456630 GTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGGCCAA 1456686 || |||||||||||||| | || || ||| ||| |||| || || | || Sbjct 112 GTGGCCGACCGCCTGCTGTACTCACT-GGGTGCATCCAAGATCTACAACGTGAAG---AA 57 Query 1456687 CCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 ||||||| |||||||| |||||||||| |||||||||||||||| |||||| Sbjct 56 CCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAG 2 >seq1300 Length=5041 Score = 347 bits (384), Expect = 2e-89 Identities = 432/581 (74%), Gaps = 8/581 (1%) Strand=Plus/Minus Query 1455731 GATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTAC 1455790 || ||||||||||| || || |||||||| |||| | || | ||| | |||||| Sbjct 2586 GAGAACCCGAACCGATTCGTGCTGTTCCCGATCCAGGAGCACGACGTGTGGCAGATGTAC 2527 Query 1455791 CAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGC-CGACACGG 1455849 || ||||| ||||| || || ||||| ||||||||| | ||||| || || |||| | Sbjct 2526 -AAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCT-GGTGCACGACCTGA 2469 Query 1455850 TCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTT 1455909 |||||| | |||| ||| |||||||||| |||||||||||||| || || || | Sbjct 2468 AGGACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAGCACGTGCTGGCATTCT 2409 Query 1455910 TTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTC 1455969 | ||| |||||||| ||||||||| |||||||||||| ||| | || ||||| Sbjct 2408 T-CGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCGATGAACTTCAGCAATGAGGTG 2350 Query 1455970 CAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCT 1456029 ||| |||| ||||| || | || ||||| ||||||||||||||||| ||||||||||| Sbjct 2349 CAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCG 2290 Query 1456030 GAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTC 1456089 || |||||||| ||||||||||| ||| |||||||| | || |||||||| ||| | Sbjct 2289 GAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTGGAGAAGGATCACTTG 2230 Query 1456090 TTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGG 1456149 | || |||||||| ||| | |||| ||| ||| |||||| ||||||| | |||||| Sbjct 2229 CTGCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGCTGGGCGCTCAAGTGG 2170 Query 1456150 ATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGG 1456208 || | | ||| | || | ||||| || | | || |||| ||| |||| Sbjct 2169 TGTGAC-CCTCGTGTTTCGTC-CTACCCGGAGCGTCTGCTGGCGTTCGCCGCCGTGGAGG 2112 Query 1456209 GCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGC 1456268 |||| || |||||||| |||||| ||||||| ||||||||||||||||||||||||| Sbjct 2111 GCATTTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGC 2052 Query 1456269 CCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 | |||| | |||| ||||| | ||||| || ||||| Sbjct 2051 CTGGTC-TGAGCTTCTCGAACGAGCTCATCAGCCGGGACGA 2012 Score = 161 bits (178), Expect = 1e-33 Identities = 240/327 (73%), Gaps = 14/327 (4%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCG-ACCGAC 1456510 ||||| ||||| || || || | ||| ||| | | || ||||||| | || | | | Sbjct 2006 TGCACACGGACTTCGCGTGCCTCATGTACTCGAAGTTGGTGAACAAGCTGCCGGAGAGCC 1947 Query 1456511 GTGCCCAAGCAGATCAT-CGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTC 1456569 | | || || |||| | ||| || || || | ||| ||| | ||||| || ||||| || Sbjct 1946 GCGTGCACGC-GATCGTGCGT-GACGCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTC 1889 Query 1456570 GCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTT 1456629 ||| || |||| ||| |||||||||||| | ||||||||||||||||||| | | || Sbjct 1888 GCTCCCCGTGGAGCTGATCGGCATGAAC-TCTGCGCTCATGTGCCAGTACATCG-AGTTC 1831 Query 1456630 GTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGGCCAA 1456686 || |||||||||||||| | || || ||| ||| |||| || || | || Sbjct 1830 GTGGCCGACCGCCTGCTGTACTCACT-GGGTGCATCCAAGATCTACAACGTGAAG---AA 1775 Query 1456687 CCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCG 1456746 ||||||| |||||||| |||||||||| |||||||||||||||| |||||| || Sbjct 1774 CCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAGCG 1715 Query 1456747 CGT-GGCGAGTACGCCAAGGCCGGCGT 1456772 ||| ||||||||| ||||||| || || Sbjct 1714 CGTGGGCGAGTACTCCAAGGCTGGTGT 1688 >seq2516 Length=319815 Score = 210 bits (232), Expect = 3e-48 Identities = 353/505 (70%), Gaps = 17/505 (3%) Strand=Plus/Minus Query 259679 GAGCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTAC 259738 ||||||||||| | || || | |||||| ||||| ||| ||||||| ||| ||| Sbjct 122007 GAGCACAAGGACGAGCTTAACTCGGCCATCATCCACGACCGGGACTTTGAGTACGACTAC 121948 Query 259739 TTTGGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGA 259797 || || | ||| || | || || | ||||| | ||| || | ||||| || Sbjct 121947 TTCGGCTTCAAGACGCTCGAGCGGGGC-TACCTCTTCCGCGTGAACGGAAAGGTCGTGGA 121889 Query 259798 GCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGA 259857 ||| |||||| | ||| ||||||| || || || || ||| || | | | Sbjct 121888 GCGCCCCCAGCAGATGATCATGCGCGTGGCGCTGGG----TATTCACAAGC--AAGACAT 121835 Query 259858 CAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTC 259917 | | ||| |||| ||| | || || ||| |||||| ||| ||| || || Sbjct 121834 CCAGGCG-----GCAC-TGCAC---ACGTATGAGCTCATGTCACAGATGTTCTTTACGCA 121784 Query 259918 AGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCT 259977 |||||||||||||||||||| |||||||||||||| |||||| |||||||| || || Sbjct 121783 CGCGACGCCCACGCTCTTTAACGCCGGCACGCCGCGTCCGCAGCTGTCGTCGTGTTTCCT 121724 Query 259978 GTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCT 260037 | ||| |||| ||| ||| ||||| |||||||| || ||||||||||||||||||||| Sbjct 121723 GCTGGCCATGCAGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGCAGTGCGCGTG 121664 Query 260038 CATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGC 260097 |||||||||| |||||| || || || || ||||| | |||||| || | Sbjct 121663 CATCTCCAAGTGGGCCGGAGGTATTGGCATTAGTATGCACAACATCCGCGCCACGAACAG 121604 Query 260098 CTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAA 260157 |||| | ||||| ||||| |||||||| | | |||||||| | || || || Sbjct 121603 CTACATCCGCGGCACGAACGGATCATCCAACGGGATCATCCCCATGCTGAGGGTCTTCAA 121544 Query 260158 CGACACGGCGCGCTACGTCGACCAG 260182 |||||||| ||||| || |||||| Sbjct 121543 TGACACGGCCCGCTATGTGGACCAG 121519 Score = 122 bits (134), Expect = 1e-21 Identities = 333/512 (65%), Gaps = 18/512 (4%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || || ||||||||||| ||| | || ||| ||||||||| ||||||||||||||| | Sbjct 121518 GGAGGAGGCAAGCGCAAAGGCTCGTTCGCCATCTACCTGGAGCCGTGGCACGCCGACGTG 121459 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | ||||| || ||||||||||||| | | | | ||| |||||||| Sbjct 121458 TTCGAGTTCCTGGAGCTGCGCAAGAACCACGGCA----ACGAGCTGCACC--GCGCGCGC 121405 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || ||||| |||| |||||| ||| ||||| ||| || ||| | | || Sbjct 121404 GACCTCTTCTACGCTCTGTGGGTCCCCGATCTGTTCATGAAGCGTGTGGAAGCGAACGGC 121345 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 | ||| || || ||||| ||||| ||||| || |||| |||| |||| | Sbjct 121344 AAGTGGAGCCTTTTCTGCCCCAATGAGGCCCCCGGACTCTACGAGTGCTGGGGCGACGAG 121285 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTC-GTGCC 262083 || || | || || ||| |||| ||| || |||| Sbjct 121284 TTCGAGACTCTGTACGAGAAGTACGAGAAGGAGGGGCGCGCGCGCAAGACGATCAATGCC 121225 Query 262084 CGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACAT 262143 | ||| | |||| ||||| | | || || || ||||| ||| ||| | ||| Sbjct 121224 ----CAGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATTGAGACGGGCGTGCCGTTCAT 121169 Query 262144 GGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACA 262201 | | ||||||||||| | ||||| | |||||||||||||| ||||| | || Sbjct 121168 GCTGTACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCTC 121109 Query 262202 GAGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGC 262261 ||| |||| ||||| |||||| | ||| |||||||| |||| |||||| Sbjct 121108 GAG--CAACTTGTGCTGCGAGATTATGGAGTACACGTCGCCCGATGAGGTGGCGGTGTGC 121051 Query 262262 AACCTCTCGAGCGTGGCCCTGCCCAAGTTTGT 262293 ||||| || |||||||| ||||||||||| Sbjct 121050 AACCTGGCGTCTGTGGCCCTCCCCAAGTTTGT 121019 >seq2573 Length=963095 Score = 194 bits (214), Expect = 2e-43 Identities = 278/390 (71%), Gaps = 4/390 (1%) Strand=Plus/Plus Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCA 332915 |||| | |||||| ||||| |||||||| || |||||||| | || |||||||| | Sbjct 432587 CGTCGGGTAGGCGCGTGAAGCGGAGGATGGCGCAGCGGCTCTGGATGGGCTCGATGATCT 432646 Query 332916 TTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCG 332975 | | ||| ||||||||||||| || |||| ||| || | | |||||||| Sbjct 432647 TAGTCGAGTTGTTGCAGGCCAGCGCGAACCTCGTGGTGGCCGAGAAGATCTCCATGGTGC 432706 Query 332976 ACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCT 333035 || || |||||||||||||| | || | ||||||| ||||| ||||| | |||| Sbjct 432707 GGCGCAGCGCCTGTTGGGCCGCGGCTGTCATCGAGTCGGCTTCGTCCAGGATCACAATCT 432766 Query 333036 TGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTT--TGATGATCTTGCG 333093 ||||||| || | ||||| | | ||||| | ||| | |||| || |||| Sbjct 432767 TGTGGCGGCCCGGGGGCAG--CGTCACTTTTTGCTGCGCAAACATCTTGATCTTCGTGCG 432824 Query 333094 CACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGC 333153 ||| ||| | |||||| || || ||||||||||| || |||||||||| | | || Sbjct 432825 CACCGTGTCGATGCCGCGGTCATCGGACGCGTTGAGCTCCAGCACGGCCTGTTTGACGCT 432884 Query 333154 CGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGG 333213 | || | || ||||||||| ||| |||||| |||||||| ||||| || ||||| Sbjct 432885 GGTGCCTAGCAGTTCGCGCGCCAAACACAGGATGCTGGTGGTCTTCCCCGTTCCCGGCGG 432944 Query 333214 ACCCGCCAGCAAGAGGTTGGGCATGTTGCC 333243 |||| ||| | |||||| | ||||||||| Sbjct 432945 GCCCGACAGGATGAGGTTCGTCATGTTGCC 432974 >seq2518 Length=327250 Score = 149 bits (164), Expect = 9e-30 Identities = 207/289 (72%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 724852 CGGTTGGCAAGCGCGGTCGCGGCCAGCGCAAGAAGAATTATGCCTCGTACTCGTCCTTTA 724911 |||||| |||| ||| ||| || |||||||| | | ||||||||| ||| | Sbjct 172733 CGGTTGCCAAGTCCGGCAAGGGCAAGGGCAAGAAGCGTGTCGAATCGTACTCGACCTACA 172792 Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| || ||||||||| || | | ||| | | | | | | Sbjct 172793 TCTACAAGGTGCTGCGTCAAGTGCACCCCGAGACGGGT-----ATCAGCAAGCGCGGC-A 172846 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 ||||||||||||||||||| |||||||||| |||| ||||||| | | |||||||| Sbjct 172847 TGTCGATCATGAACTCGTTCATCAACGACATCTTCGAGCGCATCGCCTCGGAGGCCGGCA 172906 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||| |||| | ||||||| ||| | || || ||||||||||| ||||||| Sbjct 172907 AGCTGTCGCGTTACAACAAGAAGTCGACGCTGTCCAGCCGTGAGATCCAGACGGCCGTGC 172966 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 |||| || | | || || ||||||| ||||||||| || |||||||| Sbjct 172967 GCCTCATGCTCCCTGGTGAGCTGGCCAAGCACGCCGTGTCGGAGGGCAC 173015 Score = 141 bits (156), Expect = 1e-27 Identities = 195/272 (72%), Gaps = 12/272 (4%) Strand=Plus/Minus Query 724872 GGCCAGCGCAAGAAGAATTATGCCTCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAG 724931 ||| || |||||||| | | ||||||||| ||| |||||||||||||| ||| Sbjct 316363 GGCAAGGGCAAGAAGCGTGTCGAATCGTACTCGACCTACATCTACAAGGTGCTGCGCCAG 316304 Query 724932 GTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC---ATGTCGATCATGAACTCG 724988 ||||||||| || || |||| | |||| | |||||||||||||||||| Sbjct 316303 GTGCACCCCGAGAC-----GGGCATC----AGCAAGCGCGGTATGTCGATCATGAACTCG 316253 Query 724989 TTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAAC 725048 || ||||||| || |||| || |||| | | |||||||| ||| |||| | |||| Sbjct 316252 TTCATCAACGATATCTTCGAGCGTATCGCCTCGGAGGCCGGCAAGCTGTCGCGTTACAAC 316193 Query 725049 AAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGC 725108 ||| ||| | || || ||||||||||| ||||||||||| || | | || Sbjct 316192 AAGAAGTCGACGCTGTCCAGCCGTGAGATCCAGACGGCCGTGCGCCTCATGCTTCCGGGT 316133 Query 725109 GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || ||||||| ||||||||| || |||||||| Sbjct 316132 GAGCTGGCCAAGCACGCCGTGTCGGAGGGCAC 316101 >seq2483 Length=180547 Score = 105 bits (116), Expect = 1e-16 Identities = 166/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 1152842 GGCTGCTTGCGCGCGATGATCTCCCACATGACGACGCCAAACGAGTAGACATCGGCCTTT 1152901 ||| ||| || || | ||||| ||| ||||| |||| ||| |||| |||||||| Sbjct 133476 GGCGGCTCGCACGTGTCCATCTCTGACAGCACGACTCCAAGCGAATAGATGTCGGCCTTC 133417 Query 1152902 TCCGAATACTTTTCGCCGCGCAA-GATCTCGGGCGCCGTCCACGCCGGCGTGC---CGCA 1152957 ||||| ||||| | ||| | ||| |||||||||||| |||||| | |||||| ||| Sbjct 133416 TCCGAGTACTTCTTGCC-CTCAATGATCTCGGGCGCGGTCCACAGCAGCGTGCCCACGCC 133358 Query 1152958 GCGGGTCATCGTCGCATTGTCCTGGCGGATGCGGGCAAAGCCAAAGTCGGCCACCTTGAC 1153017 ||||||||| | ||| | ||| ||||| | |||||||||| || |||| | Sbjct 133357 AGACGTCATCGTCTCGTTGACGTGGGTCTTGCGGCTGACGCCAAAGTCGCTCAGCTTGGC 133298 Query 1153018 GGTGAAATTGTCGTCGACGAGCAGGTTGGACGACTTTTGGAGGTCGCGGTGCAC 1153071 ||| ||| || | |||| ||| |||||| ||||||||||||||| Sbjct 133297 ATGGAACTTGCGGTTTAGCAGCACGTTCTTCGACTT---GAGGTCGCGGTGCAC 133247 >seq2526 Length=360848 Score = 104 bits (114), Expect = 3e-16 Identities = 218/322 (68%), Gaps = 6/322 (2%) Strand=Plus/Minus Query 2133558 GACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTCCATGTGCGAGCACCACCTGCTG 2133617 ||||||||||| | ||||| || || ||| | | ||||||||||||||||||| || || Sbjct 120048 GACGAGATGGTCATCGTGCGGGACATCGACCTGTACTCCATGTGCGAGCACCACATGGTG 119989 Query 2133618 CCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGCGGGCAAGATCATCGGTCTGAGC 2133677 || || | ||||||| ||| | || ||| | ||| ||||| | | || || ||| Sbjct 119988 CCGTTCACGGGCAAGGTGCACATCGGTTACATCCCCAACGGCAAAGTGCTGGGCCTCAGC 119929 Query 2133678 AAGATCCCGCGCATCGTCGACATGTTTTCCGACCGCTTCCAAGTACAGGAGGCACTCACG 2133737 ||| || ||||| | ||| | ||||| ||| | || || |||||| ||||| Sbjct 119928 AAGCTCGCGCGCGTGAGCGAGGTCTTTTCGCGCCGTCTGCAGGTGCAGGAGCGCCTCACC 119869 Query 2133738 CGCCAGATCG---CCGAGAGCGTGAGCCAGGTTACGGGCGCGCGCGGCGTCGGCGTCGTC 2133794 ||||||| ||| | | || || || | || | | ||||| | ||| || Sbjct 119868 AAGCAGATCGCCACCGCCATCATGGGCGTCATT--GAGCCCAAG-GGCGTGGCCGTTGTG 119812 Query 2133795 CTCGAGGGCCTGCACATGTGCGTGTGTATGCGCGGCGTGCGCAAAACGGGCTCGAACACG 2133854 |||||| | ||||||||| || ||||||||||| || | ||| | | ||| Sbjct 119811 ATCGAGGCCACCCACATGTGCATGGTCATGCGCGGCGTCGAGAAGAGCGGCGCCAGCACC 119752 Query 2133855 GTCACGCGCGTCCTCCTGGGCG 2133876 |||||| || | | ||||||| Sbjct 119751 GTCACGAGCTCCGTGCTGGGCG 119730 >seq2553 Length=565281 Score = 96.9 bits (106), Expect = 5e-14 Identities = 161/230 (70%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 1152882 ACGAGTAGACATCGGCCTTTTCCGAATACTTTTCGCCGCGCAAGATCTCGGGCGCCGTCC 1152941 ||||||| || || ||||| || ||| | |||||||||| ||||||||||||||||| Sbjct 188550 ACGAGTACACGTCCGCCTTCTCGCTGTACGTCTCGCCGCGCAGGATCTCGGGCGCCGTCC 188609 Query 1152942 ACGCCGGCGTGC---CGCAGCGGGTCATCGTCGCATTGTCCTGGCGGATGCGGGCAAAGC 1152998 || | |||||| ||| | ||||||||| | | | || ||| |||| | | Sbjct 188610 ACAGCAGCGTGCCCACGCCGTTGGTCATCGTGTCGTCGGCCGAGCGCTCGCGGCTGAGCC 188669 Query 1152999 CAAAGTCGGCCACCTTGACGGTGAAATTGTCGTCGACGAGCAGGTTGGACGACTTTTGGA 1153058 |||||||| | ||| | | || ||||| |||| |||| |||||| || Sbjct 188670 CAAAGTCGCTGAGCTTCGCACGCAGCCGGTTGTCGAGCAGCACGTTGAGCGACTT---GA 188726 Query 1153059 GGTCGCGGTGCACGATCGGCCGTTCGCGCCCGTGCAGATAGGCCA-CGCC 1153107 |||||||||| | ||| | | | ||| ||||||||||| |||| |||| Sbjct 188727 GGTCGCGGTGGATGATAATCGGCTGGCGGCCGTGCAGATACGCCAGCGCC 188776 >seq2528 Length=347663 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 165753 GACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAG 165812 |||||||||| ||||||||| | ||||| || ||||||||| | ||| ||||||||||| Sbjct 52148 GACCTGGTCAGCTGGGGCGCCATTGGTGCCCGTACCACCGAGTGTCAGCTGCACCGCGAG 52089 Query 165813 ATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGG 165862 | |||| ||| | ||||||| |||||||| ||| |||| | ||| Sbjct 52088 CTCTGCTCGGGGCTCTCCATGCCCATCGGCTTCAAGAACGGCACGGGCGG 52039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177562740065312