Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2516 286 4e-72 seq2561 158 1e-33 seq2559 158 1e-33 seq1300 158 1e-33 seq1932 140 4e-28 seq2508 102 9e-17 >seq2516 Length=319815 Score = 286 bits (316), Expect = 4e-72 Identities = 546/788 (69%), Gaps = 26/788 (3%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||| || ||||||| ||| | ||| | || ||| | | | ||||| Sbjct 121871 TCATGCGCGTGGCGCTGGGTATTCACAAGCAAGACATCCAGGCGGCACTGC-ACACGTAT 121813 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 || | ||| || | || |||||||||||| ||||| || || || ||||| || ||| Sbjct 121812 GAGCTCATGTCACAGATGTTCTTTACGCACGCGACGCCCACGCTCTTTAACGCCGGCACG 121753 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | || ||| ||||| || |||||| |||| ||| |||| |||||||| || ||| Sbjct 121752 CCGCGTCCGCAGCTGTCGTCGTGTTTCCTGCTGGCCATGCAGGACGACTCGATTGAGGGC 121693 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| ||||||||| |||| || ||||||||||||| | || ||||| || || Sbjct 121692 ATTTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCCGGAGGTATTGGCATT 121633 Query 53432 CAC-TGCTCGAACGTCCGTGC---GAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487 ||| | ||| |||| || |||| || || ||| || |||||||| | Sbjct 121632 AGTATGCAC-AACATCCGCGCCACGAACAGCT-AC--ATCCGCGGCACGAACGGATCATC 121577 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | | || ||| | || ||||| | |||||||| |||||||||| || || ||||||| Sbjct 121576 CAACGGGATCATCCCCATGCTGAGGGTCTTCAATGACACGGCCCGCTATGTGGACCAGGG 121517 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 || || |||||||| || ||||||||||||||||| |||||||||||||||||| | | Sbjct 121516 AGGAGGCAAGCGCAAAGGCTCGTTCGCCATCTACCTGGAGCCGTGGCACGCCGACGTGTT 121457 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC---CGTGACCT 53664 ||||| || |||||||| ||| || || | | ||| ||| | || || ||||| Sbjct 121456 CGAGTTCCTGGAGCTGCGCAAGAACCACGG---CAACGAGCTGCACCGCGCGCGCGACCT 121400 Query 53665 GTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGT 53723 || ||| ||||||||| | || || || |||||| | ||||| | ||| ||| Sbjct 121399 CTTCTAC-GCTCTGTGGGTCCCCGATCTGTTCATGAAGCGTGTGGAAGCGAACGGCAAGT 121341 Query 53724 GGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTGAGGAGTTT 53782 || ||| | ||||| || ||| |||||| ||| | | ||| || || || ||||| Sbjct 121340 GGAGCCTTTTCTGCCCCAATGAGGCCCCCGGACTCTACGAGTG-CTGGGGCGACGAGTT- 121283 Query 53783 AACGAGA---TGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 ||||| |||| || ||||| |||| ||| |||| | |||| || Sbjct 121282 --CGAGACTCTGTACGAGAAGTACGAGAAGGAGGGGCGCGCGCGCAAGACGATCAATGCC 121225 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| || ||||| | ||| | |||||||| ||||| |||| Sbjct 121224 CAGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATTGAGACGGGCGTGCCGTTCATGCTG 121165 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGC 53959 |||||||| ||| |||| ||| |||||| ||||| ||||| ||| |||||| Sbjct 121164 TACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCTCGAGC 121105 Query 53960 AACTTATG 53967 ||||| || Sbjct 121104 AACTTGTG 121097 Score = 199 bits (220), Expect = 4e-46 Identities = 565/849 (67%), Gaps = 53/849 (6%) Strand=Plus/Minus Query 55106 AAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAAT 55165 ||||| |||| ||||| || ||||| |||||| ||||| |||||| ||| || Sbjct 120993 AAGCTGTACGAGGTGACCAAGGTGGTGACCCGGAACTTGAACAAGGTCATTGACGTCAAC 120934 Query 55166 TACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCGGT 55225 |||||||| || | |||||||||||||||| | || ||||| || | | || || Sbjct 120933 TACTACCCCGTGGAGGAGGCGCGCAAGTCCAACATGCGCCACCGCCCGGTTGGTATTGGC 120874 Query 55226 GTACAGGGCTTGGCCGA--CATCT-TCATGATGCTCGGATTGCCCTTCGA---CTCGGAA 55279 || ||||| | || || ||| | || | ||| | ||| ||||| | || || Sbjct 120873 GTCCAGGGTCTCGCGGATGCATTTATCCTCATGAACTA--TGCG-TTCGAGAGCCCGCAA 120817 Query 55280 CCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGA 55338 || || ||| | ||| | |||||||| | || ||||||| || | | ||| Sbjct 120816 ---GCCCGTGAACTCAACATGAACATCTTCGAAACG-ATCTACTACGCTTCTATGGAGAC 120761 Query 55339 GTCGT--GTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCT 55396 ||| | ||| | | | |||| ||| | ||||||||||||| | ||||| || Sbjct 120760 CTCGATGGAGATC-GCCAAGGAGCT-GGGCCCGTACGAGACGTTCCAGGGATCGCCTGCC 120703 Query 55397 GACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCCCATGTTTGA-CAAGTT 55455 |||||| | |||||||||| | |||||| ||| ||||| | || | | || Sbjct 120702 AGCAAGGGTATCTTCCAGTTCGACATGTGGGGC--GTC--ACCCCGTCTTCGGGCTTGTG 120647 Query 55456 G---------------AAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGT 55500 | ||| | || | | | ||| | |||||||| || ||||| Sbjct 120646 GGATTGGGCTGCGCTCAAGGAGAACGTGATCAAGCACGGCATCCGCAACTCGCTCCTCGT 120587 Query 55501 GGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCC 55560 ||| || ||||| || ||||||||||||||||| |||||||||| ||| | ||||||| Sbjct 120586 GGCTCCGATGCCCACTGCGTCGACGGCTCAGATTTTGGGCAACAATGAGTCCATCGAGCC 120527 Query 55561 GTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATC---AA 55617 ||||||| | ||||| ||| ||||| || || ||||||| ||| |||| || Sbjct 120526 GTACACGTCGAACATGTACAACCGCCGCGTGCTGGCTGGTGAGT---TCACGATCGTGAA 120470 Query 55618 CAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGAT---CAAGAC 55674 |||| ||||| | ||||| ||| || | || |||| || || | ||| | Sbjct 120469 CAAGTACCTCATGAAGGAGCTGATCGAGCTGGGCATCTGGACGCCTGAGGTGCGCAA-CC 120411 Query 55675 GGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGA---GATTCCTCTGCGTCTCAA 55731 ||| || || | |||| || ||||| ||||| || | ||||| | |||| Sbjct 120410 AGATTCTG-GCTG-ACGGTGGCTCCGTGCAGAAGGTGAAATCCATTCCGGACCAGGTCAA 120353 Query 55732 GGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGA 55791 ||||| ||| ||||||||||||||| |||||| || | ||| || || || Sbjct 120352 GGAGAAGTACAAGACGGTGTGGGAGATCAAGCAGAAGGCCGTGTTGGACCTGTCGGCGGA 120293 Query 55792 TCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACT 55851 ||||| || ||||| |||| |||||| |||||||| ||| | | || | | Sbjct 120292 CCGTGGCGCCTACATTTGCCAGAGCCAGTCGCTGAACATTCACATTGCCGACCCGACGAT 120233 Query 55852 GGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTA 55911 |||| ||| || |||||||| |||| ||||||||||| ||||||||||| ||||| Sbjct 120232 TAGCAAGCTGACGTCCATGCACTTCTACGCCTGGAAGAAGGGGCTCAAGACGGGCATGTA 120173 Query 55912 CTATCTGCG 55920 ||| |||| Sbjct 120172 CTACATGCG 120164 >seq2561 Length=604796 Score = 158 bits (174), Expect = 1e-33 Identities = 561/860 (65%), Gaps = 25/860 (3%) Strand=Plus/Minus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||| || || || || || ||||| || || ||||||||||| || | || |||||| | Sbjct 371582 CTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 371523 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATA--GGCTTCTCCCCAAACTGTGC- 74572 |||||||||||||| |||||||| | ||| || || | | ||| | || | Sbjct 371522 ATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCC---AGTGAGTA 371466 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632 || ||||| || ||||| || | |||||||| ||| | | | ||||||||| Sbjct 371465 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGAT 371406 Query 74633 GAGTTTGCACGGC-AGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGA 74691 || | ||||| || | ||| | | ||||| ||| | | | ||| | | Sbjct 371405 CAGCTC-CACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTCACGCA 371347 Query 74692 CAATCTTGTGAATG----TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAA-GCGT 74746 | ||| ||| | | ||| || || ||| | | || | ||||| | | | Sbjct 371346 CGATCGCGTGCACGCGGCTCTCCGGCAG----CTTGTTCACCAACTTCGAGTACATGAGG 371291 Query 74747 CACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAG 74806 |||| | || ||| ||| ||| || || | ||| || | || ||||| || || Sbjct 371290 CACG-CGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAG 371232 Query 74807 GCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAA 74866 |||||||| || || |||||||| | ||| ||||||| ||||||||||| |||||| Sbjct 371231 ACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAA 371172 Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAG--TC 74924 ||||| || || || || || | || || | || | | | | | | || || Sbjct 371171 AATGCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTC 371112 Query 74925 ATCCAAGTCTGAGC-CCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTT 74982 | | | | ||||| || | | ||| | | |||| |||| || ||||| || Sbjct 371111 ACACCACT-TGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCAC 371053 Query 74983 GGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 | | | | ||||||| ||| ||||||| | | |||| |||| || |||||| Sbjct 371052 GCAGCAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACA 370993 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 |||||| || || |||| || ||| |||| | ||||||| | || ||||| | Sbjct 370992 CCTCCGAGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGC 370934 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 | || || || || || ||||| | | ||||| | ||||||||||| ||| Sbjct 370933 ACTTGCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCA 370874 Query 75162 GCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAA 75221 ||||| || ||||| || ||||| ||||||||||| | ||| || || || |||| Sbjct 370873 GCGAAGAATGCCAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAG 370814 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTT 75281 ||||||||||| | ||| || | ||||||| |||||||||| | | |||||| Sbjct 370813 TCCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTC 370754 Query 75282 TTGTACAAAGACCACAAGTC 75301 ||||||| ||||| ||| Sbjct 370753 TTGTACATCTGCCACACGTC 370734 >seq2559 Length=596890 Score = 158 bits (174), Expect = 1e-33 Identities = 312/452 (69%), Gaps = 15/452 (3%) Strand=Plus/Plus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| || ||||| ||||| |||||||||| || | |||||| | || ||| |||||| Sbjct 102712 AACCC-GTACCGATCCCCTCCGCACCATTCACGAGCAGCATCGGGATGATAGGCACGTAG 102770 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 | |||| || || | | ||| ||||| ||||| || | ||||| ||| ||| Sbjct 102771 TGCACAGGTTCAACTGGGAAACCATCGTCGTCTGCGTACCGCAGTAGCGCATCGTC-CTC 102829 Query 117269 GGATCGAATATGTTCTTGGTCCACGGTGCT-----AGGCGAGTGAAAATGTAACGAGAGC 117323 ||| | | | | | | ||||| || | ||||| |||||||||| || Sbjct 102830 C--TCGGGAAAGAGCAAG--CGAGTGTGCTTTTGGAGCAGCGTGAAGATGTAACGAGGGC 102885 Query 117324 TTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGT 117383 | || ||||||||||| || ||||| ||||||||||| || || | ||| || Sbjct 102886 TAGCGGCATCCTTGCCTCCTTGCAGACGGGTACCGAATTGACCTGAAGGATACAACAGCG 102945 Query 117384 TCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCG 117443 |||||||||| ||||| || | || |||| |||||||||||| || || | Sbjct 102946 GAAGGTTGTTGGATCCCACGAAATCCTGCGCCATGTTGACAATCGTCGAGTGCAGTGAAG 103005 Query 117444 CCTCACCATGGTGATACGCCGTCTGCTC-CGCCACGTAGCCCGCCAGCTGAGCCACCTTC 117502 | || |||||||| || ||||| ||||| | || ||||||||||||||| |||||||| Sbjct 103006 CTTCGCCATGGTGGTAAGCCGTATGCTCACTGCA-GTAGCCCGCCAGCTGTGCCACCTTA 103064 Query 117503 ATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTC 117562 | || ||| || || || ||||| || ||| |||||| ||||| |||| Sbjct 103065 ACCTCGCTCGTTAGCTTACGTTTCAGGCATGCGAAAAGCACCTTACGCTGCGAGATCTTC 103124 Query 117563 AGACCATCCGCCACGTGAGGG-ATCGAACGCT 117593 || || || |||| ||||| | ||| |||| Sbjct 103125 AGGCCGTCAACCAC-CGAGGGCAGCGATCGCT 103155 Score = 143 bits (158), Expect = 3e-29 Identities = 196/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | ||| || ||||||||||| ||| ||| || || || || | Sbjct 102865 GCGTGAAGATGTAACGAGGGCTAGCGGCATCCTTGCCTCCTTGCAGACGGGTACCGAATT 102924 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || || || | | || |||||||||| |||||||||| ||| |||| || | Sbjct 102925 GACCTGAAGGATACAACAGCGGAAGGTTGTTGGATCCCACGAAATCCTGCGCCATGTTGA 102984 Query 152147 CAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATC 152206 ||||||| ||||| ||||| || ||||| || ||||| ||||| | ||| | Sbjct 102985 CAATCGTCGAGTGCAGTGAAGCTTCGCCATGGTGGTAAGCCGTATGCTCACTGCAGTAGC 103044 Query 152207 CCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266 |||||| ||| |||||||| | || |||| || || || || || ||| ||| || Sbjct 103045 CCGCCAGCTGTGCCACCTTAACCTCGCTCGTTAGCTTACGTTTCAGGCATGCGAAAAGCA 103104 Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 |||| ||||| || |||| ||||| ||||| Sbjct 103105 CCTTACGCTGCGAGATCTTCAGGCCGTCAACCAC 103138 >seq1300 Length=5041 Score = 158 bits (174), Expect = 1e-33 Identities = 561/860 (65%), Gaps = 25/860 (3%) Strand=Plus/Plus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||| || || || || || ||||| || || ||||||||||| || | || |||||| | Sbjct 1696 CTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 1755 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATA--GGCTTCTCCCCAAACTGTGC- 74572 |||||||||||||| |||||||| | ||| || || | | ||| | || | Sbjct 1756 ATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCC---AGTGAGTA 1812 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632 || ||||| || ||||| || | |||||||| ||| | | | ||||||||| Sbjct 1813 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGAT 1872 Query 74633 GAGTTTGCACGGC-AGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGA 74691 || | ||||| || | ||| | | ||||| ||| | | | ||| | | Sbjct 1873 CAGCTC-CACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTCACGCA 1931 Query 74692 CAATCTTGTGAATG----TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAA-GCGT 74746 | ||| ||| | | ||| || || ||| | | || | ||||| | | | Sbjct 1932 CGATCGCGTGCACGCGGCTCTCCGGCAG----CTTGTTCACCAACTTCGAGTACATGAGG 1987 Query 74747 CACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAG 74806 |||| | || ||| ||| ||| || || | ||| || | || ||||| || || Sbjct 1988 CACG-CGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAG 2046 Query 74807 GCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAA 74866 |||||||| || || |||||||| | ||| ||||||| ||||||||||| |||||| Sbjct 2047 ACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAA 2106 Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAG--TC 74924 ||||| || || || || || | || || | || | | | | | | || || Sbjct 2107 AATGCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTC 2166 Query 74925 ATCCAAGTCTGAGC-CCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTT 74982 | | | | ||||| || | | ||| | | |||| |||| || ||||| || Sbjct 2167 ACACCACT-TGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCAC 2225 Query 74983 GGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 | | | | ||||||| ||| ||||||| | | |||| |||| || |||||| Sbjct 2226 GCAGCAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACA 2285 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 |||||| || || |||| || ||| |||| | ||||||| | || ||||| | Sbjct 2286 CCTCCGAGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGC 2344 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 | || || || || || ||||| | | ||||| | ||||||||||| ||| Sbjct 2345 ACTTGCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCA 2404 Query 75162 GCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAA 75221 ||||| || ||||| || ||||| ||||||||||| | ||| || || || |||| Sbjct 2405 GCGAAGAATGCCAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAG 2464 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTT 75281 ||||||||||| | ||| || | ||||||| |||||||||| | | |||||| Sbjct 2465 TCCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTC 2524 Query 75282 TTGTACAAAGACCACAAGTC 75301 ||||||| ||||| ||| Sbjct 2525 TTGTACATCTGCCACACGTC 2544 >seq1932 Length=9237 Score = 140 bits (154), Expect = 4e-28 Identities = 359/539 (67%), Gaps = 7/539 (1%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| || || | ||| || | || ||||| || || |||||||| || || ||||| Sbjct 290 GCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGGCATGAGGCCGCGCTT 349 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| ||||||||||| |||||| ||||| || || || || Sbjct 350 CTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCCCTCCACGGCGGCGAA 409 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAG--TCATCCAAGTCTGAGC-CCATTC 74944 || | || || | || | | | | | | || ||| | | | ||||| || | Sbjct 410 CGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTCACACCACT-TGAGCGCCCAGC 468 Query 74945 AGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTT 75003 | ||| | | |||| |||| || ||||| || | | | | ||||||| Sbjct 469 GGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCAAGTGATCCTTCTCCA 528 Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063 ||| ||||||| | | |||| |||| || |||||| |||||| || || |||| Sbjct 529 CGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTCCGAGTGGATGTTCTCGA 588 Query 75064 TGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAA 75122 || ||| |||| | ||||||| | || ||||| | | || || || || || Sbjct 589 TGG-CGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTTGCACCTCATTGCTGAAG 647 Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATT 75182 ||||| | | ||||| | ||||||||||| ||| ||||| || || || || Sbjct 648 TTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGAAGAATGCTAGCACGTGC 707 Query 75183 TTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAA 75242 ||||| ||||||||||| | ||| || || || |||| ||||||||||| | ||| Sbjct 708 TTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAGTCCTTCAGGTCGTGCACCAGG 767 Query 75243 TCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTGTACAAAGACCACAAGTC 75301 || | ||||||| |||||||||| | | |||||| ||||||| ||||| ||| Sbjct 768 TCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCTTGTACATCTGCCACACGTC 826 >seq2508 Length=280174 Score = 102 bits (112), Expect = 9e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| || || || | |||||| | |||||||| || ||| ||||| || ||||| Sbjct 38790 GTGAAAATATAACGAGCGCTGGCAGAGTCCTTGCCGCCCATCAGACGCGTACCGAACTGA 38849 Query 152089 CC-AGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || | ||| | || |||| || |||||| || ||||||| ||| |||| ||||| Sbjct 38850 CCGATAGGAGAC-AGAAGGTGGATGTTGTTACTTCCAACGAAATCCTGCGCCATGTTCAC 38908 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || ||| |||| |||| || ||||| || ||||| | ||||||| | || || Sbjct 38909 GATACAGCCTTGCAAACTCTGCTCTCCGTGATGGTACGCAGAGTGCTCCGAAACATAGCC 38968 Query 152208 CGCCAACTGCGCCACCTT 152225 ||||||||||||||||| Sbjct 38969 AGCCAACTGCGCCACCTT 38986 Score = 100 bits (110), Expect = 3e-16 Identities = 238/360 (66%), Gaps = 0/360 (0%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || ||||||||||| || || |||| |||| |||||| | || || | ||| | Sbjct 38637 CCTGTTCCGATACCATCACTGCCGTTCACGAGAACCATCGGGATGATCGGGATGTACCAT 38696 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || || || | | | ||||| || | ||||| ||||| | ||||| |||| Sbjct 38697 TCGGGTTCGATAGACTGGCCGTCTTCATCCAAATACTTCAGCACATCGTTGTCCAGCGGA 38756 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 ||| | || | || | | | | | |||||||| ||||||| ||| |||| Sbjct 38757 TCGTAGATAAGCCGCGTGAGCTGCTCCAAGTTGGTGAAAATATAACGAGCGCTGGCAGAG 38816 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 |||||||| || |||||||||||||| || || | || || |||| | |||| Sbjct 38817 TCCTTGCCGCCCATCAGACGCGTACCGAACTGACCGATAGGAGACAGAAGGTGGATGTTG 38876 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 || || || || | || |||| ||| || || ||||| | ||| ||| || Sbjct 38877 TTACTTCCAACGAAATCCTGCGCCATGTTCACGATACAGCCTTGCAAACTCTGCTCTCCG 38936 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511 || || ||||| | ||||||| || ||||| |||| ||| |||||||| | |||||| Sbjct 38937 TGATGGTACGCAGAGTGCTCCGAAACATAGCCAGCCAACTGCGCCACCTTAAGCTCTGAC 38996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547198379644800