Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_003345.1 Length=77670 Score E Sequences producing significant alignments: (Bits) Value seq16 82.4 4e-11 seq7 82.4 4e-11 >seq16 Length=148473 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800 |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| Sbjct 65 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 122 >seq7 Length=325413 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800 |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| Sbjct 132391 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 132448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248405418323832