Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 1e-11 >seq3 Length=592184 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 272875 TGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTAACCAAC 272934 ||||||| ||||||| ||||||| |||||| || ||||||| || | |||||||||||| Sbjct 544971 TGGGCCCTACAGGACTCGAACCTGTGACCAATCGGTTATGAGCCGACCGCTCTAACCAAC 544912 Query 272935 TGAGCTATAGGCCCT 272949 ||||||| |||||| Sbjct 544911 TGAGCTAAGGGCCCT 544897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896889764068480