Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq752 91.5 1e-13 >seq752 Length=16686 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 48537 CCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAA 48596 |||| || ||||||||||| | | || ||||||| |||||||| ||| || | | Sbjct 12931 CCTTCTGGATGTTGTAATCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 12990 Query 48597 TTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG 48656 | | |||||||| || ||| | | |||||||||| ||||||||||||| | Sbjct 12991 TCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTGACATTGT 13050 Query 48657 CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAA 48716 | ||| | |||| | |||| || | || ||||| || || || || || ||||||| Sbjct 13051 CAATGCTGTCGGACGGCTCCACGTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAA 13110 Query 48717 AAATCTGCAT 48726 | |||||||| Sbjct 13111 AGATCTGCAT 13120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421227830036552