Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_007581.1 Length=185683 Score E Sequences producing significant alignments: (Bits) Value seq44 82.4 9e-11 >seq44 Length=71862 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 174196 TCACCTGCAATTAACACATATTCAGGTGTAACTACTGGTGGATTAATTAATCCATTTTCT 174255 || |||||||||||| ||| || ||||| |||||| ||||| || | ||| |||| Sbjct 28247 TCTCCTGCAATTAACTGATAATCTGGTGTTACTACTATAGGATTGATAAGTCCGTTTTGA 28188 Query 174256 TTAATATCTTTTGCTAATTCTTCAATGTTACCGAAGTCTTTTCTTATTCTGTCTTTAATT 174315 | ||| |||| || | ||||||||| ||||||||| || | || | ||| | | | Sbjct 28187 TCAATGTCTTGCGCAAGTTCTTCAATACCACCGAAGTCCTTGCGGATACGGTCGCTGACT 28128 Query 174316 ATTATTTTATTGATATCTAT 174335 | |||||||| || ||||| Sbjct 28127 TTAATTTTATTTATGTCTAT 28108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594023798122560