Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_013648.1 Length=39576 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 6e-12 >seq3 Length=592184 Score = 84.2 bits (92), Expect = 6e-12 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 38657 TTCGGGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTT 38716 ||| || || |||||||||||||||||||| | ||||||||| | | ||||| ||||| Sbjct 544894 TTCAGGGCCCTTAGCTCAGTTGGTTAGAGCGGTCGGCTCATAACCGATTGGTCACAGGTT 544953 Query 38717 CGAGTCCTGTATGGTCCAT 38735 ||||||||||| || |||| Sbjct 544954 CGAGTCCTGTAGGGCCCAT 544972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126514760874912