Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 1e-11 >seq3 Length=592184 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||||||||| | ||||||||||||||| || || | || ||||| || | ||| || Sbjct 402461 ACCGTATGCCAAAGCTGCTGCAGTTGGCTCGTTGACGATACGCAGAACTTCCAGACCTGC 402402 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 |||||| | | ||| |||||||| | ||| |||||| || || |||||||| || Sbjct 402401 GATTTTACCTGCATCTTTGGTTGCTTGACGCTGGCTGTCATTGAAGTAAGCTGGTACCGT 402342 Query 322363 AATAACTGCTT 322373 |||||||||| Sbjct 402341 GATAACTGCTT 402331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780596514765712