Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=341960 Score = 84.2 bits (92), Expect = 2e-11 Identities = 68/80 (85%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 163902 AAAATTCTGATGGGTCAGTAGTTCAGC-GGATAGAACAACGCTCTTCTAAAGCGTGTGTC 163960 ||||||| ||| ||||||| ||||| ||||||| |||||| ||||||| |||| ||| Sbjct 289645 AAAATTC--ATGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTC 289588 Query 163961 GGGGGTTCGATTCCCTCCTG 163980 |||||||||| ||||||||| Sbjct 289587 GGGGGTTCGAATCCCTCCTG 289568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560576101404800