Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 7e-15 >seq2 Length=712559 Score = 95.1 bits (104), Expect = 7e-15 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 20442 ATACACCGTGAATACTTTCATCTCTTAAAATCAAATTAATGATTTCTCCACTTGCTTTCA 20501 ||||||| |||||||||||||| | | ||||| || |||||| || ||||| | | Sbjct 470326 ATACACCATGAATACTTTCATCCCGCAGAATCAGATCAATGATCTCACCACTGCAGGTGA 470267 Query 20502 TCCTACCTTGTCCCGCTAATTTTAGTGGTAGGTAGAATCCACTATAGAACAAGTATGATT 20561 | |||||||| ||||| | ||||| | ||||||| || || ||||| || || Sbjct 470266 GTTTGCCTTGTCCAGCTAAATAGAGTGGATAGAAGAATCCGCTGTAAAACAAATAACTTT 470207 Query 20562 CCAATAGTACGGATACGCACATTGCCATGTATAACTC 20598 |||| |||||||| || ||| ||||| ||||| || Sbjct 470206 CCAAAAGTACGGAAGCGGCCATCGCCATATATAAATC 470170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300143347873600