Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 6e-14 >seq3 Length=592184 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 198935 GGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGAG 198994 || ||||||||||||||||||||||| | || ||||||| || |||||||| |||||||| Sbjct 544898 GGGCCCTTAGCTCAGTTGGTTAGAGCGGTCGGCTCATAACCGATTGGTCACAGGTTCGAG 544957 Query 198995 TCCAGTAGGGGCCA 199008 ||| |||||| ||| Sbjct 544958 TCCTGTAGGGCCCA 544971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741407411517760