Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq491 306 5e-78 seq4366 233 3e-56 seq1537 167 3e-36 seq270 145 1e-29 seq295 127 3e-24 seq752 122 1e-22 seq312 122 1e-22 seq62 116 5e-21 seq449 102 1e-16 seq54 102 1e-16 seq4439 87.8 2e-12 seq196 87.8 2e-12 >seq491 Length=17858 Score = 306 bits (338), Expect = 5e-78 Identities = 1029/1584 (65%), Gaps = 26/1584 (2%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| || || || || ||||| || || || || || Sbjct 5695 GGCATCGACCTGGGCACGACCTACTCGTGCGTGGGCGTGTGGCAGAACGACCGCGTGGAA 5636 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || || |||| ||||| || ||||| || || || || ||||| ||||| || || | Sbjct 5635 ATCATTGCGAACGACCAGGGCAACCGCACGACACCGTCCTACGTGGCCTTCACGGACACG 5576 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || || | || || || || || || ||| || |||||| | ||| || || Sbjct 5575 GAGCGCCTTATCGGCGACGCGGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTG 5516 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | |||||| | || || |||||||| | || |||| || || || Sbjct 5515 TTTGATGTCAAGCGTTTGATCGGGCGCAAGTTCACCGACCCTGAAGTGCAGTCGGACATC 5456 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 | | ||||| | | | |||| | || ||| || ||||||| | | || || | Sbjct 5455 AGGCACTGGCCGTTTAAAGTGGCTCGAGGTCCGGAGAATAAGCCGGA-AGTGGTGGTGCA 5397 Query 195605 TTTCAC-GGTGAGAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 |||| |||||| || | ||| | ||||| || || ||||| |||||| || | | Sbjct 5396 GTTCAAAGGTGAGCAGGTG-ACTTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGGTCA 5338 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| |||| ||||| ||| ||| ||||| ||||| | ||||| ||||| | Sbjct 5337 AGATGCGCGAGATCGCGGAGGCTTACATTGGTAAGCAGGTGAAGAACGCAGTGGTGACGG 5278 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||||||||| || || || | || ||||| | Sbjct 5277 TGCCGGCCTACTTCAACGACTCGCAGCGACAGGCGACCAAAGATGCCGGTGTCATTGCTG 5218 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 || | ||| || | || ||||| || || ||||| || || ||||| || ||||||| Sbjct 5217 GTTTGAACGTGCTACGTATCATCAACGAGCCGACAGCCGCCGCTATTGCCTACGGTCTGG 5158 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||| |||| | ||| | || || ||||||| || || ||||| || ||||||| Sbjct 5157 ACAAG---AAGGGTGGAGAGCACAACGTGCTGATCTTCGACCTTGGTGGAGGAACGTTTG 5101 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 | ||||| ||||| | |||||||| || || ||||| || ||||| || || || || | Sbjct 5100 ACGTCTCGCTTCTTACTATTGAAGACGGCATCTTCGAGGTGAAGGCGACGGCAGGCGACA 5041 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTC 196021 | || || || || ||||| ||||| || || || || ||||| | || ||| Sbjct 5040 CGCACCTGGGCGGCGAAGACTTCGACAACCGCCTCGTCGAGTTCTTTGT-GCAAGAATTC 4982 Query 196022 CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACT 196081 || ||| || || ||||| | | || | | || || || || || | || Sbjct 4981 AAGCGCAAGCATCGCAAGGATATGACGGTGAACTCGCGCGCGCTGCGGCGTCTGCGTACG 4922 Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141 || || || |||||||| || || || || | || ||| | | |||||||| Sbjct 4921 GCGTGCGAGCGTGCCAAGCGTACACTGTCGATGTCTGCGCAAGCGTACATCGAGATTGAC 4862 Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTA 196201 ||| || | || || | || ||| | | || ||||| || || || || || || | Sbjct 4861 TCGCTGCTGGATGGTGTCGATTTCAACTCTACCATTACGCGCGCGCGGTTCGAGGATCTT 4802 Query 196202 AACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAG 196261 ||| || ||| | ||| ||||| || || | || || || || ||| | ||| Sbjct 4801 TGTGGTGAATTCTTTCGCAAGACAATGGACCCAGTGGCGCAGGTTCTACGAGACTCGAAG 4742 Query 196262 ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAG 196321 || ||| |||| | || | || || ||||| || || || ||||| |||||| Sbjct 4741 CTGTCGAAGAGCCAGGTGAACGAGGTGGTGCTAGTGGGCGGCTCGACGCGTATCCCGAAG 4682 Query 196322 ATTCAACAGATGCT-TTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCC 196380 | || ||| || | || | ||| ||||| ||| | | ||| | |||||||| Sbjct 4681 GTGCAGCAGTTGTTGATCGA-CTTTTTCAACGGTAAGAAGCTCTTCAAGTCCATCAACCC 4623 Query 196381 GGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA 196440 ||| ||||| || || || ||||| | || ||||| || || || ||| |||| Sbjct 4622 GGACGAAGCCGTAGCGTACGGTGCTACAGTGCAGGCGGCCATCCTGAGCGGTCATGAC-- 4565 Query 196441 TAATAACGTCCAA-------GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 | | ||||||| || || |||| | || || || || | || || || Sbjct 4564 TCGT--CGTCCAAGCTGCAGGACCTGTTGCTGTTGGACGTGGCGCCGCTGTCTCTAGGCT 4507 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 | || || || || || || ||||| || | || | ||||| || |||| | | Sbjct 4506 TGGAGACGGCTGGCGGAGTCATGACCAAGCTGATCCCGCGCAACACCACGGTTCCAGCCA 4447 Query 196554 AGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| | |||| || || ||||| | || || || | ||||| || ||||| Sbjct 4446 AGAAGGCGC-AGTCGTTCTCGACGTACGCGGACAACCAGTCCGGTGTCTTGATCCAAGTG 4388 Query 196613 TATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGAC 196671 | || || || || || | || || ||| | || || || ||| || ||| Sbjct 4387 TTCGAGGGTGAGCGTTCGATGACCTGTGACAATCATATTCTGGGCAAGTTTAACTTGGAC 4328 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || || || | || | ||||| || || ||| | || ||||| | || | Sbjct 4327 -GGCATCCCGCCCATGCCTCGCGGTGTCCCGCAAATTGACGTGACGTTCGACGTGGATGT 4269 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || ||| | ||||| | || | ||| ||| | | ||||| | ||||| Sbjct 4268 CAACGGCATTTTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCAC 4209 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || || || |||||||| ||| | ||| || || || || || |||||| | || || Sbjct 4208 CATCACGAACGACAAGGGCCGGTTATCTCAGTCCGAGATCGACCGCATGGTTGATGACGC 4149 Query 196852 GGAAAAGTACAGGGAAGAAGACGA 196875 || ||||||| ||| |||| || Sbjct 4148 TGAGAAGTACAAGGACCAAGATGA 4125 >seq4366 Length=1396 Score = 233 bits (258), Expect = 3e-56 Identities = 837/1301 (64%), Gaps = 11/1301 (1%) Strand=Plus/Minus Query 195335 GTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACA 195394 || || || ||||| || || || || ||||| ||| | || ||||| || ||||| || Sbjct 1396 GTGGGCGTGTGGCAGAACGACCGCGTGGAGATCATCGCCAACGACCAGGGCAACCGCACC 1337 Query 195395 ACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAAT 195454 || || || ||||| ||||| || || | || || || | || |||||||| || || Sbjct 1336 ACGCCGTCCTACGTGGCCTTCACGGACACGGAGCGCCTGATCGGTGATGCCGCCAAGAAC 1277 Query 195455 CAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAG 195514 ||| || |||||| | ||| || || || ||||| ||||| ||||| || |||||| Sbjct 1276 CAGGTGGCCATGAACGCGCACAACACGGTGTTCGACGCCAAGCGCCTTATCGGCCGCAAG 1217 Query 195515 TTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGT 195574 || ||||| || || || | ||| || ||| ||||| | | | ||| ||| |||| Sbjct 1216 TTCTCGGACCCGATCGTGCAGGCCGACATCAAGCACTGGCCGT-TCAAGCTGTCGCCGGG 1158 Query 195575 -GTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCC 195633 | | || ||||| ||| | || | || | || ||| || || || Sbjct 1157 CGCCGGCGACAAGCCGCAGATCACGGTGCAGTTCAAGGGCGAGTCCAAGACGTTCCAGCC 1098 Query 195634 CGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGG 195693 ||| || || ||||| |||||| | || |||||| ||| || || | ||||| || Sbjct 1097 CGAGGAGATCTCGTCCATGGTGCTCATCAAGATGCGCGAGGTGGCCGAGGCCTTCATCGG 1038 Query 195694 TAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACA 195753 || || || | || || | || ||||| || ||||||| || || || || || Sbjct 1037 CAAGGAGGTCAAGAACGCCGTCATCACGGTACCGGCCTACTTCAACGACTCGCAGCGCCA 978 Query 195754 GGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACC 195813 ||| || |||||||| | ||| || || || || ||| || | || ||||| || || Sbjct 977 GGCCACCAAGGACGCCGGTGCCATCGCCGGGCTGAACGTGCTGCGTATCATCAACGAGCC 918 Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 || || || || ||||| || || ||||||||| |||| || || || || | Sbjct 917 CACGGCCGCCGCTATTGCGTACGGCCTGGACAAG---AAGGGCGGCGAGCGCAACGTGCT 861 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 |||||| || || || || || || || ||||| || || || ||||| | || || Sbjct 860 GATCTTCGACCTGGGCGGCGGCACCTTCGATGTGTCGCTGCTGTCCATTGAGGAGGGCAT 801 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACG 195993 ||||| || ||||| || ||||| || || || || || || || || ||||| || Sbjct 800 CTTCGAGGTGAAGGCCACCGCTGGCGACACGCACCTGGGCGGCGAGGACTTCGACAACCG 741 Query 195994 TCTTCTC-CGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAA 196052 || || || || || | |||||| || || | || || || | | Sbjct 740 CCTCGTCGAGTTCTTCGT-GCAGGAGTTCAAGCGCAAACACCGCAAGGACATGGCACAGA 682 Query 196053 ATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTT 196112 | | | || || || || || | || || || || || ||||| || || || || | Sbjct 681 ACCAACGCGCGCTGCGGCGTCTGCGTACGGCGTGCGAGCGCGCCAAGCGGACGCTGTCGT 622 Query 196113 CTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAA 196172 | |||| || | |||| || || ||| ||| ||||| | |||||| | | | Sbjct 621 CGTCGGCCCAGGCCTACATTGAAATCGACTCGCTGTACGACGGCGTGGACTTCAACTCGA 562 Query 196173 CTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAAC 196232 | || || || || ||||| || || | | || | || | ||| ||||| | Sbjct 561 CCATCACGCGCGCCCGTTTCGAGGACCTGTGCGGCGACTACTTCCGAAAGACCATGGAGC 502 Query 196233 CTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAG-TCTAAGGTTGATGAAATTGTC 196291 | || || | || | || ||||| ||| || ||| | |||| | || | || Sbjct 501 CCGTGGAGAAGGTGTTGCGCGACGCCAAGCTGTCCAAGAGCCNAGGTGAACGAGGTGGTG 442 Query 196292 CTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAAT 196351 || ||||| || || || ||||| |||||| | || || |||| ||| |||||||| Sbjct 441 CTAGTGGGCGGCTCGACGCGTATCCCGAAGGTGCAGCAACTGCTGTCTGAGTTCTTCAAC 382 Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTT 196411 || || ||||| | ||||||||||| || || || || || || || | || Sbjct 381 GGCAAGGAGCCCAACAAGTCCATCAACCCGGACGAGGCCGTAGCGTACGGCGCAACGGTA 322 Query 196412 CAGGCTGCTATTCTCTCAGGTGTTGAC---AATAATAACGTCCAAGATCTTCTGCTACTT 196468 ||||| || || || || ||| | || | || || || |||| | Sbjct 321 CAGGCGGCCATCCTGGGCGGCAACGACTCGTCGGACAAGCTGCAGGACCTGTTGCTGTTG 262 Query 196469 GATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATT 196528 || || | || | || ||||| || || || || || ||||| ||||| | | || Sbjct 261 GACGTGACGCCGCTGTCTCTGGGCCTGGAGACGGCAGGCGGTGTCATGACGACGCTGATC 202 Query 196529 GATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAAT 196588 | | ||||| || | || || ||||||| || || || ||||| | || || Sbjct 201 GCGCGTAACACGACGGTGCCTACCAAGAAGGCGCAGACGTTCTCGACGTACGCGGACAAC 142 Query 196589 CAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTC 196629 ||||| ||||| | || || || | || || || ||||| Sbjct 141 CAACCTGGTGTGCTCATCCAGGTGTTCGAGGGCGAGCGCTC 101 >seq1537 Length=5520 Score = 167 bits (184), Expect = 3e-36 Identities = 614/961 (64%), Gaps = 3/961 (0%) Strand=Plus/Minus Query 195920 ATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAA 195979 ||||| | || || ||||| || ||||| || ||||| || || || || |||||||| Sbjct 5518 ATTGAGGAGGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACACGCACCTGGGTGGTGAG 5459 Query 195980 GATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAA 196039 || ||||| ||||| | || || || | |||||| || ||| | || Sbjct 5458 GACTTCGACAACCGTCTGGTGGACCACTTCACTCAGGAGTTCAAGCGCAAGCACCGCAAG 5399 Query 196040 GATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA 196099 || || | | || | | || || ||||| || | || || || || ||||| || Sbjct 5398 GACATCACGGACAACCAGCGTGCCCTCCGTCGTCTGCGTACGGCTTGCGAGCGTGCTAAG 5339 Query 196100 CGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATT 196159 || || || || || |||| || | | |||||||| || |||| || || ||| Sbjct 5338 CGTACGCTTTCGTCGTCGGCCCAGGCCTACATCGAGATTGACTCTCTGTTCGATGGCATT 5279 Query 196160 GACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGG 196219 ||||| | | || || || || || ||||| || || | | ||| | || | Sbjct 5278 GACTTTAACTCGACCATCACGCGCGCCCGTTTCGAGGACATGTGCGGTGACTACTTCCGT 5219 Query 196220 AAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTT 196279 ||| ||||| || || || | || | || ||||| ||| || ||| |||| Sbjct 5218 AAGACCATGGAGCCCGTGGAGAAGGTGTTGCGCGACGCCAAGCTGTCCAAGAGCCAGGTG 5159 Query 196280 GATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCT 196339 | || |||||||||| || || || || ||||| |||||| | || ||| | || || Sbjct 5158 CACGAGGTTGTCCTTGTCGGTGGCTCGACGCGTATCCCGAAGGTGCAGCAGCTTCTGTCC 5099 Query 196340 AGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTAT 196399 ||||||||| || || ||||| | ||||||||||| || || || || || Sbjct 5098 GACTTCTTCAACGGCAAGGAGCCCAACAAGTCCATCAACCCGGACGAGGCTGTGGCCTAC 5039 Query 196400 GGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT---AATAACGTCCAAGAT 196456 ||||| |||| |||||||| || || || ||| | | || | || || Sbjct 5038 GGTGCCACCGTCCAGGCTGCCATCCTGAGTGGCAACGACTCTTCGGAGAAGCTGCAGGAC 4979 Query 196457 CTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATG 196516 || |||| || ||||| | || | || |||||||| || || || || ||||| ||| Sbjct 4978 CTGTTGCTGCTCGATGTGACTCCTCTGTCTCTGGGTCTGGAGACGGCAGGCGGTGTCATG 4919 Query 196517 ACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACG 196576 || | | || | | ||||| || | || || |||||| || || || ||| Sbjct 4918 ACGACGCTGATCGCGCGTAACACGACGGTGCCTACCAAGAAGTCGCAGACGTTCTCGACG 4859 Query 196577 TATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCA 196636 || | || || ||||| ||||| | ||||| || | || || || ||||| | Sbjct 4858 TACGCGGACAACCAACCTGGTGTGCTCATTCAGGTGTTCGAGGGCGAGCGCTCGATGACC 4799 Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 || ||| | || || || | ||| | || || || || | || | ||| Sbjct 4798 CGTGACAACAACCTGCTGGGCAAGTTCAACCTGGACGGCATCCCGCCCATGCCTCGTGGT 4739 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 ||||| |||||| |||| ||||| || ||||| || || || || ||||| | || Sbjct 4738 GTTCCCCAGATTGATGTGACGTTCGACATCGACGCGAACGGGATCCTGAACGTGTCGGCC 4679 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 | ||| ||| | | ||||| | ||||| || || || |||||||| || || Sbjct 4678 GTGGAGAAGTCGACGGGCAAGGAGAACAAGATCACCATCACGAACGACAAGGGCCGACTG 4619 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 || || || || || || ||||| || || || ||||||| | || |||||| Sbjct 4618 TCGCAGTCCGATATCGACCGCATGGTGGCGGAGGCCGAGAAGTACAAGTCGGAGGACGAG 4559 Query 196877 G 196877 | Sbjct 4558 G 4558 >seq270 Length=49446 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || | || || || || |||||| | || || ||| |||| Sbjct 17059 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 17000 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 16999 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 16940 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 16939 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 16880 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||||||||| || ||||| || || | || || || ||| Sbjct 16879 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGT 16832 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || |||||| | || || ||| |||| Sbjct 17287 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 17228 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 17227 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 17168 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 17167 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 17108 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||||||||| || ||||| || || Sbjct 17107 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCT 17076 >seq295 Length=50006 Score = 127 bits (140), Expect = 3e-24 Identities = 389/586 (66%), Gaps = 19/586 (3%) Strand=Plus/Plus Query 77933 GGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGA 77992 |||||| || ||||| || || | | ||||||| || | | |||||||| Sbjct 30113 GGAAAGGTCGTGGAGCGCCCCCAGCAGATGATCATGCGCGTGGCGCTGGGTATTCACAAG 30172 Query 77993 AATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCA 78051 | || || | |||| ||| | |||||||| ||||| || || | |||| || Sbjct 30173 CAAGACATCCAGGCGGCACTGCACACGTATGAGCTCATGTCACAGATGT-TCTTTACGCA 30231 Query 78052 CGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCT 78111 ||| || || || | ||||| || || || || ||||| ||| |||| || |||||||| Sbjct 30232 CGCGACGCCCACGCTCTTTAACGCCGGCACGCCGCGTCCGCAGCTGTCGTCGTGTTTCCT 30291 Query 78112 ACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCA 78171 || || | |||| ||||| ||| | || || |||| || |||| |||| || Sbjct 30292 GCTGGCCATGCAGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGCAGTGCGCGTG 30351 Query 78172 GATTTCTAAGTGGGCTGGTGGTATAGGTCTTCA-TATTCACGATGTTCGTGCAAACAAGT 78230 || || |||||||| || ||||| || | ||| ||| ||| | | || || | || Sbjct 30352 CATCTCCAAGTGGGCCGGAGGTATTGG-CATCAGTATGCACAACATCCGCGCCACGAACA 30410 Query 78231 CCAGGATTAGAGGAACTAATGG-TCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTC 78289 | || | || || || || ||| || | || || || || ||||| ||||| ||| Sbjct 30411 GCTACATCCGCGGCACGAACGGATCA-TCCAACGGGATCATCCCCATGCTGAGGGTCTTC 30469 Query 78290 AATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGGGGTCATTCGCTATG 78346 |||| || || |||||||| |||| | || | | | || || || ||||| || Sbjct 30470 AATGACACGGCCCGCTATGTGGACCAGGGAGGAGGCAAGCGCAAAGGCTCGTTCGCCATC 30529 Query 78347 TACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGT 78406 ||||| || || ||||||||||| || | || || |||| || || ||||| || Sbjct 30530 TACCTGGAGCCGTGGCACGCCGACGTGTTCGAGTTCCTGGAGCTGCGCAAGAACCACGGC 30589 Query 78407 GACGAG--GAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTA 78464 ||||| | | | || || | || | ||| ||| ||||| | || ||||| || | Sbjct 30590 AACGAGCTGCACCGCG-CGC-GCGACCTCTTCTACGCTCTGTGGGTCCCCGATCTGTTCA 30647 Query 78465 TGAAGAGAGTTGAGGAAG-GA--GGTAAATGGTCTCTTTTCTGTCC 78507 ||||| | || ||||| || || || ||| |||||||| || Sbjct 30648 TGAAGCG---TGTGGAAGCGAACGGCAAGTGGAGCCTTTTCTGCCC 30690 >seq752 Length=16686 Score = 122 bits (134), Expect = 1e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 13120 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 13061 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || |||||||||||||| || || ||| Sbjct 13060 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCAG 13001 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | ||||||||| Sbjct 13000 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGATTACAAC 12941 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 12940 ATCCAGAAGG 12931 >seq312 Length=32183 Score = 122 bits (134), Expect = 1e-22 Identities = 208/298 (70%), Gaps = 13/298 (4%) Strand=Plus/Minus Query 198660 TTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCA 198719 |||||||| |||||||||||||| ||| | ||| || || || || || || | || Sbjct 4549 TTCATCGAAATGTTCGTTGGTGTGGGTCCCTCGCGTGTACGTGACCTGTTCAAGGAGGCT 4490 Query 198720 CGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTG-----GTAAGA 198774 || | || ||||| || | ||||| ||||| ||||| ||||| | | | || Sbjct 4489 CGCGCGAACGCTCCATGCATTGTGTTCATCGATGAAATTGATGCTGTGGCCCGTGCACGA 4430 Query 198775 AGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTC 198834 ||| || | |||| || | | || ||||| |||||||| | ||| | |||||||| | Sbjct 4429 AGCAAGG-GCAACTTCTCCGGC-GGCAATGACGAGCGTGAAAACACGCTCAACCAGCTGC 4372 Query 198835 TCACTGAGATGGATGGTTTTGAC---AATGAGACTGGTATCGTGGTGATTGCTGCTACAA 198891 | |||||||||||||| || | |||| ||| | |||||| |||||| ||| | Sbjct 4371 TGGTGGAGATGGATGGTTTCAACTCGAGTGAG---GGTGTGGTGGTGCTTGCTGGTACGA 4315 Query 198892 ATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCGTAAGAT 198949 | | ||||| || || | || | || |||||||||||||||||||| |||| Sbjct 4314 ACCGCGCCGATATACTTGACAAGGCCATCCTGCGTCCCGGTCGATTCGACCGGCAGAT 4257 >seq62 Length=75506 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 20311 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 20252 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 20251 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 20192 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 20191 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 20132 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | ||||| || || Sbjct 20131 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTTCGCGGCGG 20085 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 20539 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 20480 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 20479 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 20420 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 20419 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 20360 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | || || ||||| Sbjct 20359 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 20313 >seq449 Length=41604 Score = 102 bits (112), Expect = 1e-16 Identities = 384/594 (65%), Gaps = 20/594 (3%) Strand=Plus/Plus Query 196268 AAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAA 196327 ||||| |||| || || ||||| || ||||| || || |||||||| || ||| | || Sbjct 26281 AAGTCGGAGGTGGACGAGATTGTGCTGGTGGGCGGTTCGACCCGTATCCCCAAGGTGCAG 26340 Query 196328 CAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTTAAACAAAACGA----TCAACCCG 196381 ||| || | | || || |||||| ||||| | || | ||||| Sbjct 26341 CAGCTGAT--CAAGGACTACTTCAACGGCAAAGAGC----CCTCGCGCGGTGTGAACCCC 26394 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT 196441 || || || ||||| || ||||| || || |||| | ||| || |||| || | Sbjct 26395 GACGAGGCTGTTGCCTACGGTGCTGCTGTGCAGGGCGGTATCCTG---GGTGGCGAGCAG 26451 Query 196442 AATAACGT--CCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | || | ||||| | | || || | ||||| | || | |||| |||| |||| Sbjct 26452 GACGACCTGACCAAGGACGTGCTTCTGATCGATGTGGTGCCTCTGTCCCAGGGTATTGAG 26511 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || | |||||| || ||||| || | ||| | | ||||| || ||||| |||||| Sbjct 26512 ACTGTGGGTGGCGTCATGACCAAGCTCATTAACCGCAACACTGTGATCCCGACCAAGAAG 26571 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 || ||| || || || || || || || | ||| | ||| || || | || Sbjct 26572 TCGCAGACCTTCTCGACCTACCAGGACAACCAGCCCGCTGTGCTTATCCAGGTGTTCGAG 26631 Query 196619 GGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || || || | || || | ||||| |||| ||| || || | ||||| | || || | Sbjct 26632 GGCGAGCG-TGCCATGACCAAGGACAACCGTCTTCTGGGCAAGTTCGAGCTCACTGGCCT 26690 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 || | || || | ||||| || |||||| | || ||||| || ||||| || || Sbjct 26691 GCCGCCCGCCCCGCGTGGTGTGCCCCAGATTGAGGTGACGTTCGAGATTGACGCCAACGG 26750 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 || || | || | ||||||||||||| | ||||| | || | ||| ||| || Sbjct 26751 TATCCTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCACGATCAC 26810 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| || || || ||||||| || || || ||||| || || || Sbjct 26811 TGCCGAGAAGGGCCGTCTGTCGCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 26864 >seq54 Length=68445 Score = 102 bits (112), Expect = 1e-16 Identities = 254/382 (66%), Gaps = 8/382 (2%) Strand=Plus/Minus Query 198573 GGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTC 198632 ||| | |||||||| ||||||||| | || ||||||||| | || |||||| | |||| Sbjct 21061 GGTCCTCCGGGTACAGGTAAAACCTTGCTTGCTCGTGCTGTTGCCGGTGAAGCAGGTGTA 21002 Query 198633 CCCTTTCTTCAGTGCT-CCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAA 198691 || || |||||| | ||| | ||| | || ||||| || ||||| ||||| Sbjct 21001 CCATT-CTTCAGCATTTCCGGTTCTGACTTCGTTGAAATGTTTGTCGGTGTCGGTGCATC 20943 Query 198692 GCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGA 198751 || || || || | ||||| | || |||| |||||||||||||| || || Sbjct 20942 TCGTGTACGTGACTTGTTTGAAAATGCGAAGAAAAACGCCCCATGTATCATCTTTATCGA 20883 Query 198752 TGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCG 198811 ||| ||||| || || || ||||||||| | | |||| | || || || Sbjct 20882 TGAAATTGATGCGGTAGGACGTCAGCGTGGTGCTGGTCTTGGTGGTGGTCACGACGAACG 20823 Query 198812 TGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTT---TGACAATGAGACTGG 198868 ||| || || | |||||| | ||| ||| ||||||||||| | |||||| || Sbjct 20822 TGAACAAACACTCAACCAGTTGCTCGTTGAAATGGATGGTTTCGGAGCCAATGA---AGG 20766 Query 198869 TATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCC 198928 ||| | | |||| ||||| || | || || || || ||| |||| ||||| Sbjct 20765 TATTATCATCGTTGCAGCTACGAACCGTGCAGACATTCTGGACCCTGCCTTGCTGCGTCC 20706 Query 198929 CGGTCGATTCGACCGTAAGATT 198950 || || || |||||| | ||| Sbjct 20705 AGGACGTTTTGACCGTCAAATT 20684 >seq4439 Length=1131 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/71 (90%), Gaps = 4/71 (6%) Strand=Plus/Minus Query 167232 GTGGGGTTTGAACCCACG-AGACTTGC--GTC-AGCGGGTCTTAAGTCCGCCCCCTTAGA 167287 |||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||| Sbjct 276 GTGGGGTTTGAACCCACGCAGACTGGAATGTCTAGCGGATCTTAAGTCCGCCCCCTTAGA 217 Query 167288 CCACTCGGGCA 167298 ||||||||||| Sbjct 216 CCACTCGGGCA 206 >seq196 Length=34778 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/71 (90%), Gaps = 4/71 (6%) Strand=Plus/Minus Query 167232 GTGGGGTTTGAACCCACG-AGACTTGC--GTC-AGCGGGTCTTAAGTCCGCCCCCTTAGA 167287 |||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||| Sbjct 276 GTGGGGTTTGAACCCACGCAGACTGGAATGTCTAGCGGATCTTAAGTCCGCCCCCTTAGA 217 Query 167288 CCACTCGGGCA 167298 ||||||||||| Sbjct 216 CCACTCGGGCA 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657824967629440