Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2952 221 1e-51 seq295 203 4e-46 seq851 197 2e-44 seq202 154 2e-31 seq176 132 6e-25 seq426 125 9e-23 seq273 123 3e-22 seq319 122 1e-21 seq146 111 2e-18 seq78 107 2e-17 seq383 102 1e-15 seq67 98.7 1e-14 seq118 96.9 4e-14 seq386 86.0 8e-11 >seq2952 Length=1496 Score = 221 bits (244), Expect = 1e-51 Identities = 230/299 (77%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||||||||| ||| | |||| | ||||| Sbjct 669 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTT 610 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || |||| |||||||||||| |||||||||||||||||| |||| Sbjct 609 GCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 550 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||||||||| ||||||||||||| ||| | || | |||||| Sbjct 549 AGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAGTCCT 490 Query 869811 CGGTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 |||| || | ||||||| ||||||||| ||||||| ||| ||||| ||||| ||| Sbjct 489 TCAGGTCGTGCAC-CAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCTTG 431 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 ||||||| ||| || | || | |||| ||||| || || || ||||| ||||| || Sbjct 430 TACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTC 372 Score = 203 bits (224), Expect = 4e-46 Identities = 242/319 (76%), Gaps = 12/319 (4%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| |||||||||||||||| |||||| |||||||||||||||| ||||||||| Sbjct 1264 GCCTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATC 1205 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTC-GCATCCGAGCGACGC 868809 | |||||||| ||||||||| | |||||| ||| ||| || || || Sbjct 1204 ATATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCC-AGTGAGTA 1146 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||||||||||||| || ||||||||||||||||||||||| | | |||||||||||| Sbjct 1145 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGAT 1086 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACG-A 868928 ||| |||| || ||||| |||||||| ||||| | ||| ||| | || || || ||| | Sbjct 1085 CAGCTCCACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTC-ACGCA 1027 Query 868929 TGATCTGCCTGGGCACGTCGG----CCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGG 868984 |||| || | ||||| ||| ||| ||||||| || | | ||| ||| | ||| Sbjct 1026 CGATC-GC--GTGCACG-CGGCTCTCCGGCAGCTTGTTCACCAACTTCGAGTACATGAGG 971 Query 868985 CAGGCAAAGTCGCAGTGCA 869003 || || ||||| ||||| Sbjct 970 CACGCGAAGTCCGTGTGCA 952 Score = 140 bits (154), Expect = 4e-27 Identities = 199/278 (72%), Gaps = 3/278 (1%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||| | ||||| ||| || || |||||||||||||||||| Sbjct 949 CCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGGCATGAGGCCGCGCTTC 890 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||||| |||||||| || |||||||| |||||||| || Sbjct 889 TTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCCCTCCACGGCGGCGAAC 830 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 | | || ||||| | || | ||| | | || |||||| | ||||||| Sbjct 829 GCCAGCAGACGCTCCGGGTAG--GACGAAACAC-GAGGGTCACACCACTTGAGCGCCCAG 773 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||| ||| ||| |||| | ||| |||||||| || | | | | ||||| || Sbjct 772 CGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCAAGCGATCCTTCTCC 713 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATA 869457 | | |||||||| || ||||||||||| ||||| || Sbjct 712 ACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTA 675 >seq295 Length=50006 Score = 203 bits (224), Expect = 4e-46 Identities = 336/481 (70%), Gaps = 17/481 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || ||||| |||||||| || ||||| | |||||||| | || |||||||| Sbjct 30496 CTGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGTTGGA 30437 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||| ||||| | |||| | | |||||| | |||||| | ||| Sbjct 30436 TGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCATACTGATGCC 30377 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || |||||| ||||||||||| ||||||||| |||||||||||||| |||||||| Sbjct 30376 AATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCCCTC 30317 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||||||||| ||| |||| ||| || || |||||||| ||||| ||| |||||| Sbjct 30316 AATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGTGCC 30257 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||| ||||||||||||||||| || || ||| | | |||||| || || || Sbjct 30256 GGCGTTAAAGAGCGTGGGCGTCGCGTGCGTAAAGAACATCTGTGACATGAGCTCATACGT 30197 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | ||| |||| | || | | || | | ||||| || || || Sbjct 30196 ---GTGCAGTGCCGCCTGGATGTCTTGCTTGT--GAATACCCA-----GC-----GCCAC 30152 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 |||||||| ||| | |||||| ||||| ||||| ||| ||| | ||||| | Sbjct 30151 GCGCATGATCATCTGCTGGGGGCGCTCCACGACCTTTCCGTTCACGCGGAAGAGGTA-GC 30093 Query 1630485 CCGGCGCATG-GTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGG 1630543 || || || | ||| ||| ||| |||||| | |||| || ||||||||| ||||| Sbjct 30092 CCCGCTCAAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTCCCGGTCGTGGATGATGG 30033 Query 1630544 C 1630544 | Sbjct 30032 C 30032 Score = 174 bits (192), Expect = 2e-37 Identities = 337/504 (67%), Gaps = 8/504 (2%) Strand=Plus/Minus Query 1628101 ACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAA 1628160 ||||||||||| |||||||| | |||||||| |||||| || |||||||| Sbjct 30996 ACAAACTTGGGGAGGGCCACAGACGCCAGGTTGCACACCGCCACCTCATCGGGCGACGTG 30937 Query 1628161 AACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| | |||||| ||||| |||| ||| |||| || |||||||||||||| Sbjct 30936 TACTCCATAATCTCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTC 30877 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | | ||||| | |||||||||| |||||| | ||| |||| ||||| |||||||| Sbjct 30876 GACTTGCGGTTGGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATCTGCGCG 30817 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCAC-GACAGTC---CGCGCGCGGCCCTN 1628336 | | |||||| |||| | ||| | |||| || ||| |||||||| |||| Sbjct 30816 TCCAGGATGGCGAACCACAGCTGCTG----GGCATTGATCGTCTTGCGCGCGCGCCCCTC 30761 Query 1628337 NNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGG 1628396 || || | |||| ||||||||| || ||||| Sbjct 30760 CTTCTCGTACTTCTCGTACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCCGGG 30701 Query 1628397 CGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAG 1628456 ||||| || || || || ||| | ||| | || | || ||| || || Sbjct 30700 GGCCTCATTGGGGCAGAAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAACAG 30641 Query 1628457 GTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT 1628516 || |||||| ||||| |||||||||||||| |||| | ||| ||||||||||| Sbjct 30640 ATCGGGGACCCACAGAGCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTT 30581 Query 1628517 CTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAA 1628576 ||| || || || | |||| | ||||||||||||||||||||||||| ||| || Sbjct 30580 CTTGCGCAGCTCCAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAA 30521 Query 1628577 GGCGCCCTTGCGCTTGCCGCCGCC 1628600 | ||| ||||||||||| || || Sbjct 30520 CGAGCCTTTGCGCTTGCCTCCTCC 30497 Score = 134 bits (148), Expect = 2e-25 Identities = 340/508 (67%), Gaps = 22/508 (4%) Strand=Plus/Minus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGG-CGGGCCTGGTGCGCAGATAGTACATGC 1627039 || ||| ||||| ||||||||||||||||| ||||| | ||||| |||||||| | Sbjct 31894 CTTGTCCACGGTGAACTGGATGGCGTCGGCTTTCGGGCGTCC-GCGCATGTAGTACATAC 31836 Query 1627040 CGGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGC--GCTCGGGCGT 1627097 | |||||||| || ||| |||||| |||||| ||||| | || ||| ||| Sbjct 31835 CCGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATGGACGTCA-GCTTGCTAAT-CGT 31778 Query 1627098 CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 || |||||| || | ||| ||||||||||||||| | |||| | || || || Sbjct 31777 CGGGTCGGCAATGTGAATGTTCAGCGACTGGCTCTGGCAAATGTAGGCGCCACGGTCCGC 31718 Query 1627158 CGCCATGTCGATGGTGACCCGG--TTGGGC---ACCTCCCACACGGTCTTGAAGATGGCC 1627212 || || ||| | || ||| || || | ||||||||| |||||| | | || Sbjct 31717 CGACAGGTCCA-----ACACGGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCC 31663 Query 1627213 TTGAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACG 1627272 |||| | | ||| | | | || || |||||| ||||| | || | Sbjct 31662 TTGACCTGGTCCGGAA--TGGATTTCACCTT----CTGCACGGAGCCACCGTCAGCCAGA 31609 Query 1627273 AGCCTGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGG 1627332 | | || ||| | || |||||||| | ||| || | ||||| ||| | |||| Sbjct 31608 ATCTGGTTGCGCACCTCAGGCGTCCAGATGCCCAGCTCGATCAGCTCCTTCATGAGGTAC 31549 Query 1627333 CGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATG 1627392 ||| || | || || || || | ||||||||||| |||| ||||| ||| Sbjct 31548 TTGTTCACGATCGTGAACTCACCAGCCAGCACGCGGCGGTTGTACATGTTCGACGTGTAC 31489 Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 1627452 |||| | ||| ||||||||| ||||| | ||||| || |||||||| | ||| Sbjct 31488 GGCTCGATGGACTCATTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGGCATCGGAGCC 31429 Query 1627453 ACGAGGAGCGAGTTGCGCAGGCCGTGCT 1627480 ||||||||||||||||| | |||||||| Sbjct 31428 ACGAGGAGCGAGTTGCGGATGCCGTGCT 31401 >seq851 Length=10161 Score = 197 bits (218), Expect = 2e-44 Identities = 275/382 (72%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 1573869 GGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGCATC 1573928 ||| ||||| | |||||| | ||| |||| ||||| || ||||| |||||||| |||||| Sbjct 4081 GGCAACATGACGAACCTCATCCTGTCGGGCCCGCCGGGAACGGGGAAGACCACCAGCATC 4022 Query 1573929 GCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAAC 1573988 |||| ||||||| | || | ||| | || | | |||||||||| || |||||| Sbjct 4021 CTGTGTTTGGCGCGCGAACTGCTAGGCACCAGCGTCAAACAGGCCGTGCTGGAGCTCAAC 3962 Query 1573989 GCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGC-CTCCAA 1574047 ||||| || || ||||| ||||| ||||||| || |||||| || | ||| Sbjct 3961 GCGTCCGATGACCGCGGAATCGACACGGTGCGCACGAAGATCAAGATGTTTGCGCAGCAA 3902 Query 1574048 GAGGATCGAC-CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCC 1574106 ||| ||| ||||| || || ||||||||| | | ||||| ||||| ||||||| Sbjct 3901 AAGG--TGACGCTGCCCCCGGGCCGCCACAAGATTGTGATCCTGGACGAAGCCGACTCGA 3844 Query 1574107 TCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGC 1574166 | || | |||||||| ||||| ||||| ||||||||| | | | ||| ||| Sbjct 3843 TGACAGCCGCGGCCCAACAGGCGCTGCGCCGCACCATGGAGATCTTCTCGGCCACCACGA 3784 Query 1574167 GCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCG 1574226 | || || ||||| ||||||| ||| | | | |||||||| || |||| || ||||| | Sbjct 3783 GGTTCGCGCTGGCCTGCAACAACTCGACTAAGATCATCGAGCCCATCCAGAGCCGCTGTG 3724 Query 1574227 CCATTCTGCGCTTTGTGCGCCT 1574248 |||| || ||||| |||||| Sbjct 3723 CCATCCTCCGCTTCACGCGCCT 3702 >seq202 Length=49050 Score = 154 bits (170), Expect = 2e-31 Identities = 296/431 (69%), Gaps = 4/431 (1%) Strand=Plus/Plus Query 18061 ATGAGCACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGC 18120 |||||||| || ||| | || | ||||| |||||||||||||||||| | ||| Sbjct 3898 ATGAGCACCTTTGGCCGCTTCTTCCGCGTCACAACCTTTGGCGAGTCGCACTGCAAGGGT 3957 Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGT-GCATGCCACTGGCCGAGGCCGACATCCA 18179 || ||||||||| | ||||||||||| |||| || || | || | |||||||||||||| Sbjct 3958 GTGGGCTGCATCGTGGACGGCGTGCCCCCGTCGCTTG-CGCTCACGGAGGCCGACATCCA 4016 Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239 ||| ||| | || ||||| || |||||| || || | || || ||| ||||| Sbjct 4017 GCCACAGCTCACGCGCCGCCGCCCCGGCCAGAGCAAGCTCACGACCCCTCGCGACGAGAA 4076 Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGG 18299 || | || | |||| | ||||| ||||| ||| |||||||||| |||| | | Sbjct 4077 GGACCTGGTGACCATCATGAGCGGCACTGAGAAGGGCTTCACGCTCGGTACGCCGCTGGC 4136 Query 18300 CCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCC 18359 ||||| ||| |||| || ||| ||| || || || ||| | ||||| Sbjct 4137 GCTCTTCGTGCCCAATGAGAACGTGCGCCCCAAGGATTACAAGGAGATGGACGCCGTGCC 4196 Query 18360 GCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCA-TCAAGGCGTCGTCGG 18418 || || |||||||||||||| ||| | |||||||||| | | | | | | Sbjct 4197 CCGCCCGGGCCACGCCGACTACACGTACCAGATGAAGTACGGCACGCGCGCCAGCAGC-G 4255 Query 18419 GCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCG 18478 |||| ||||| | ||||| ||||| | ||||| || | ||||| || |||| Sbjct 4256 GCGGCGGCCGCGCCAGCGCCCGGGAGACTATTGGCCGCGTGGCATCTGGCGCCGTGGCCG 4315 Query 18479 AGAAATGGCTC 18489 ||||||||||| Sbjct 4316 AGAAATGGCTC 4326 Score = 132 bits (146), Expect = 6e-25 Identities = 120/150 (80%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103 |||||| || |||||| || ||||||||| ||||||| ||| | ||||| ||| Sbjct 4741 GAGGACTCCACCGGCGGAGTCGTCACGTGCGTGATCCGCAACGCGCCTGTGGGCCTGGGC 4800 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||||||||| |||||||| |||||| ||| || ||||||||| |||| ||||| || Sbjct 4801 GAGCCGTGCTTCGACAAGATGCAGGCCGTGCTGGCGCACGCCATGATGTCCATCCCAGCT 4860 Query 19164 ACCAAGGGATTCGAGATTGGCAGCGGGTTT 19193 |||||||| |||||||| ||| ||||||| Sbjct 4861 ACCAAGGGCTTCGAGATCGGC-TCGGGTTT 4889 >seq176 Length=49468 Score = 132 bits (146), Expect = 6e-25 Identities = 174/238 (73%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 1178255 GACCGGCCGATCGTGCACCGCGACCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTC 1178314 || |||||||| ||||||| ||||||||| ||||| || | || ||| | ||||| Sbjct 6129 GAGCGGCCGATTCTGCACCGAGACCTCAAGAGCCCCAACTTGTTGGTGGACAAGAACTTT 6188 Query 1178315 ACAATCAAGGTGGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGC-GACGATGAC 1178373 | || ||| || | ||||||||| | |||||| || | || ||| ||| ||||| Sbjct 6189 AACATTAAGTTGTCAGACTTTGGCCTGGCCCGCGTCAAGGCTCACG-TGCAGACCATGAC 6247 Query 1178374 GCGG---TGCGGCACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTC 1178430 | | ||||||||| ||||| |||||||||||| ||| || | || ||| | Sbjct 6248 GGGCAACTGCGGCACGGTCCAGTGGATGGCGCCCGAGGTGCTGGGCAACCAGAAGTACAC 6307 Query 1178431 GGAAAAGGCCGACGTCTACTCGTTTGGCGTCGTCATGTGGGAGATCATCACGCGCAAG 1178488 ||| ||||| ||||||| |||||| || ||||||| ||||||||| ||||| || || Sbjct 6308 GGAGAAGGCTGACGTCTTCTCGTTCGGGATCGTCATCTGGGAGATCGTCACGGGCGAG 6365 Score = 118 bits (130), Expect = 1e-20 Identities = 197/284 (69%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGACCTCA 1349491 ||||||||||| | | ||||||||| | || | ||| || ||||||| ||||||| Sbjct 6097 CGGCCAAGGGCATGTCGTACCTGCACCACTTTGAGCGGCCGATTCTGCACCGAGACCTCA 6156 Query 1349492 AGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCCTGG 1349551 ||||| |||| || |||| ||| | |||| ||| | ||| || | ||||||||||||| Sbjct 6157 AGAGCCCCAACTTGTTGGTGGACAAGAACTTTAACATTAAGTTGTCAGACTTTGGCCTGG 6216 Query 1349552 CGCGCATTAAGG---AGGACAACGCCACGATGACCCGCTGCGGCACGCCCTGCTGGACGG 1349608 | ||| | |||| | | | ||| || | | |||||||||| | |||| || Sbjct 6217 CCCGCGTCAAGGCTCACGTGCAGACCATGACGGGCAACTGCGGCACGGTCCAGTGGATGG 6276 Query 1349609 CGCCCGAGGTCATACGCGGCGAGCGCTACGACGAGCGGGCCGACGTCTACTCATTTGGCA 1349668 |||||||||| | || | || ||| ||| ||| ||||||| ||| || || | Sbjct 6277 CGCCCGAGGTGCTGGGCAACCAGAAGTACACGGAGAAGGCTGACGTCTTCTCGTTCGGGA 6336 Query 1349669 TCATCGCGTGGGAGGTGCTCACGCGCCGCCGCCCCTACGACGGC 1349712 || || |||||| | ||||| || | || ||||||||| Sbjct 6337 TCGTCATCTGGGAGATCGTCACGGGCGAGTGTCCGTACGACGGC 6380 >seq426 Length=28035 Score = 125 bits (138), Expect = 9e-23 Identities = 162/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | || ||||||||||| ||||||||||| || || | Sbjct 27263 GCTTGGCCAGCTCACCAGGGAGCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACA 27204 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | ||||||| |||| | Sbjct 27203 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGA 27144 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG-TTGGAGATGCCCACGTCGGGG 1254521 ||||||||| ||||||||||| | |||||| | | | ||| ||| ||| |||||| Sbjct 27143 TGTCGTTGATGAACGAGTTCATAATCGACAT-GCCGCGCTTGCTGATACCCGTCTCGGGG 27085 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 ||||| || ||||||||||||||| ||| ||||||||| Sbjct 27084 TGCACTTGACGCAGCACCTTGTAGATGTACGTCGAGTACGA 27044 >seq273 Length=59125 Score = 123 bits (136), Expect = 3e-22 Identities = 163/223 (73%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | || ||||||||||| ||||||||||| || || | Sbjct 24909 GCTTGGCCAGCTCACCAGGGAGCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACA 24968 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | |||| || |||| | Sbjct 24969 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATACGCTCGAAGA 25028 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACAT--CG-ACTTGTTGGAGATGCCCACGTCGG 1254519 | ||||||| ||||||||||||| |||||| || |||| | ||||||| |||| Sbjct 25029 TATCGTTGATGAACGAGTTCATGATCGACATACCGCGCTTGCT---GATGCCCGTCTCGG 25085 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 |||||||||| ||||||||||||||| | | ||||||||| Sbjct 25086 GGTGCACCTGGCGCAGCACCTTGTAGATGTAGGTCGAGTACGA 25128 >seq319 Length=26777 Score = 122 bits (134), Expect = 1e-21 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 92603 GGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACGAT 92662 ||||||||| |||||| |||||||||||| | ||| ||||| | ||| | Sbjct 7637 GGCGATCTGCTTGGTGAGGCGCTCCTGCACCTGCAGACGGCGCGAAAAGACCTCGCTCAC 7696 Query 92663 GCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCCTT 92722 ||||| || |||||| ||||| | | |||| |||| | ||| || | ||| |||| Sbjct 7697 GCGCGCGAGCTTGCTGAGGCCCAGCACTTTGCCGTTGGGGATGTAACCGATGTGCACCTT 7756 Query 92723 GCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACGAT 92782 |||| | || |||| || |||||||||||||||||| | | ||||| ||| |||||||| Sbjct 7757 GCCCGTGAACGGCACCATGTGGTGCTCGCACATGGAGTACAGGTCGATGTCCCGCACGAT 7816 Query 92783 CACCATCTCG 92792 ||||||||| Sbjct 7817 GACCATCTCG 7826 >seq146 Length=55421 Score = 111 bits (122), Expect = 2e-18 Identities = 285/423 (67%), Gaps = 22/423 (5%) Strand=Plus/Plus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 ||| ||||||||||||||||||| | | || | ||| | || | ||| |||||| Sbjct 26966 CCGCCGGTGCCGTTCTTGAAGCCCACAGGCATGGACAGGCCACTCGTGAGCTCACGGTGC 27025 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCC---AAA 1726849 | |||| |||||||||||| ||||| | || ||||||| ||||||||| ||| || Sbjct 27026 AGCTGGGACTCGGTCGTGCGAGCGCCAATAGCCCCCCACGACACCAGGTCGGCCGTGAAC 27085 Query 1726850 TAAGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACG 1726909 | | ||| | | | | || ||||||| ||||||| | | | ||| ||| Sbjct 27086 T--GCGGCGAGATGGTGTCCAAG-AACTCGAGACTCACGGGCAGCCCCAGCGCGTTCACG 27142 Query 1726910 AGATCGCGCAACAGGCGGC--GCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGT 1726967 || || ||| || |||| || | | ||| | | | |||| | ||| || Sbjct 27143 ---TCCAACAGCAGTTTGCGTGCGATGCGG--ATGCCCTTGTTGATGCGGAAGGACTGGT 27197 Query 1726968 CGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACAT 1727027 | ||||| |||||| || || |||||||| |||||||||||||||||||| |||| | Sbjct 27198 CCAGGTCCGGGTCGTTGATGAGTCCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCGAAGT 27257 Query 1727028 AGGCGCGC---ATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCA 1727084 | | |||| ||||||| || ||| || || ||| ||| || || || | | | | Sbjct 27258 ACGTGCGCATAATGACCA-GC--AGCTCGCCGTCGAGCTC--CTGGGCCAGCGAC-TGGA 27311 Query 1727085 GGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAA 1727144 |||| | ||||| | | |||| ||| |||||| || ||||| || |||| | Sbjct 27312 GGCGCGCAGCGTAGTCCATGGCGGCAGCCACGTCGTGGATGGAGCACGGGCCCACGACCA 27371 Query 1727145 CCA 1727147 ||| Sbjct 27372 CCA 27374 >seq78 Length=176444 Score = 107 bits (118), Expect = 2e-17 Identities = 115/148 (78%), Gaps = 8/148 (5%) Strand=Plus/Plus Query 1592150 GACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAG 1592209 ||| |||||||| | || || ||| | ||||| |||||||||||| | ||||||||| Sbjct 153957 GACATCGAGCAGGAGATTCTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAG 154016 Query 1592210 CCTCTGCTCGATCTTGG-GTGC---AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCC 1592265 ||||| || ||||| |||| ||| ||||||| |||||| ||||| ||| |||| Sbjct 154017 AGCCTGCTGGA-CTTGGCGTGCGCTAAG---GTGGCCAGCATGATTAAGGGAAAGACGCC 154072 Query 1592266 CGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||| |||| || |||||| Sbjct 154073 CCAGGAGATCCGCGAGACGTTCAACATC 154100 >seq383 Length=22770 Score = 102 bits (112), Expect = 1e-15 Identities = 162/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 1178267 GTGCACCGCGACCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGTG 1178326 ||||||||||||||||||||| ||| |||| | || ||| || |||| || Sbjct 6055 GTGCACCGCGACCTCAAGTCGAAGAACGTGCTGCTAAACCGCAAGTTTCATGCCAAGCTG 6114 Query 1178327 GCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGCGACGATGACG--CGGTG-CGGC 1178383 |||||||||| | ||||| | | | ||| | |||||||||| || | ||| Sbjct 6115 AGCGACTTTGGCGTCAGCCGCAAGACCCACGTCAACGAGACGATGACGTCTGGCGTGGGC 6174 Query 1178384 ACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGAC 1178443 |||| | |||||| ||||||||| || | ||| || |||||||| ||||||||| Sbjct 6175 ACGCTGCTGTGGACCGCGCCCGAGATCATTGAGGGCAAGAAGTACTCGGAGAAGGCCGAC 6234 Query 1178444 GTCTACTCGTTTGGCGTCGTCATGTGGGAGATCATCACGCGCAAGCAGCC 1178493 |||| ||| |||| ||||| ||| ||||| |||| || ||| ||| Sbjct 6235 ATCTATTCGCTTGGAGTCGTGCTGTCAGAGATGGACACGTGCGAGCCGCC 6284 >seq67 Length=72866 Score = 98.7 bits (108), Expect = 1e-14 Identities = 171/245 (70%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 1347608 TCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAGA 1347667 || ||||||||||||||||||||||||||||||| |||||| | | | || ||| Sbjct 41997 TCATCCACCGCGACCTCAAGTCGCTCAACGTGCTGCTCGACAACCGGCTGCGTGCGAAGC 42056 Query 1347668 TCTCAGACTTTGGCCTCA--CGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGG 1347724 || |||||||| |||| ||| || | ||||| || | | | || ||| ||||| Sbjct 42057 TCAGCGACTTTGGGCTCAGCCGCGAGCGCTCGGCCGACGACACGATGACCAACGGCGTGG 42116 Query 1347725 GCACCGTGCACTGGTCGGCGCCCGAGGTGCTGTCGGCCGACGGCGACGCCAACCTCTTGC 1347784 |||| || ||| ||||||||||| | ||| || |||||| || || | | Sbjct 42117 GCACGCTGTTGTGGACGGCGCCCGAGATCCTG-CG-----CGGCGAGACCTACAGCGAGA 42170 Query 1347785 TGGCCGACGTCTACTCGTTTGGCATCGTCCTGTGGGAGGTGCTCACGCGCCAGAGCCCCT 1347844 ||| ||||| ||||||| | |||||| |||| ||| || |||| | | | |||| Sbjct 42171 AGGCGGACGTGTACTCGTACGCCATCGTGCTGTCCGAGCTGGACACGTGTCTGCCGCCCT 42230 Query 1347845 ACGCG 1347849 |||| Sbjct 42231 TCGCG 42235 >seq118 Length=45932 Score = 96.9 bits (106), Expect = 4e-14 Identities = 100/130 (77%), Gaps = 6/130 (5%) Strand=Plus/Plus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || || ||| | ||||| |||||||||||| | ||||||||| | ||||| || || | Sbjct 485 CTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGTCGCTGCTGGACCTGTCG 544 Query 1592228 TG---CAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 || |||| ||||| | ||||||||| ||||| |||||||||||||||||| || Sbjct 545 TGCGCCAAG---GTGGCTACCATGATCAAAGGCAAATCGCCCGAGGAGATCCGCGCCACT 601 Query 1592285 TTTAACATCA 1592294 ||| ||||| Sbjct 602 TTTGGCATCA 611 >seq386 Length=27150 Score = 86.0 bits (94), Expect = 8e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 1726961 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 1727020 || ||||||||||| |||||| || ||| |||||||| |||||||| ||||| ||||| Sbjct 13324 GATCCGTCGAGGTCCGGGTCGTTGATCAGACCCTTCCATCCGACGGTGGTGCGAGGCTTC 13265 Query 1727021 TCGACATAGGCGCGCATGAC 1727040 |||| ||| |||||||||| Sbjct 13264 TCGAAGTAGACGCGCATGAC 13245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106765641562984