Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 3e-11 >seq3 Length=592184 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/119 (76%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 87492 ACCCAGACGTGTCAGGAACATTTTCATCTGTGCCTTGGTTACGT--TCTGGGCTTCGTCC 87549 ||| ||||| ||||| ||||||||||||||| || ||| ||| |||||||||| ||| Sbjct 434772 ACCAAGACGGGTCAGAAACATTTTCATCTGTTCC--GGTGTCGTATTCTGGGCTTCATCC 434715 Query 87550 AGGATAACTACCGCGTTCTCAAACGTGCGGCCACGCATATACGCGAAGGGAGCAATTTC 87608 ||||||| | || | || | || || || |||||||| || | ||||||||||| Sbjct 434714 AGGATAATAAACGAATCATCCAGTGTACGTCCCCGCATATAGGCTAGAGGAGCAATTTC 434656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698517052118080