Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 9e-11 >seq6 Length=341960 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 154257 TGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGA 154316 || ||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||| Sbjct 282196 TGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTCGA 282255 Query 154317 GTCCAACCTGAGTCGCCA 154334 ||| |||| | || || Sbjct 282256 ATCCCTCCTGGGACGTCA 282273 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 154255 CATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTC 154314 |||| ||||||||||||| ||||||||||||| ||||||||| |||||||| ||||| Sbjct 289639 CATGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTC 289580 Query 154315 GAGTCCAACCTGAGTCGCCA 154334 || ||| |||| | || || Sbjct 289579 GAATCCCTCCTGGGACGTCA 289560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605975118053760