Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_028671.1 Length=41307 Score E Sequences producing significant alignments: (Bits) Value seq3 105 2e-18 >seq3 Length=592184 Score = 105 bits (116), Expect = 2e-18 Identities = 78/90 (87%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 37506 ACATTTTTGCTTTCAGGACCATTAGCTCAGCTGGTTAGAGCAAACGGCTCATAACCGTTC 37565 ||||||||| |||||| || ||||||||| |||||||||| ||||||||||||| | Sbjct 544885 ACATTTTTG--TTCAGGGCCCTTAGCTCAGTTGGTTAGAGCGGTCGGCTCATAACCGATT 544942 Query 37566 GGTCACAGGTTCGAGTCCTGTATGGTCCAT 37595 |||||||||||||||||||||| || |||| Sbjct 544943 GGTCACAGGTTCGAGTCCTGTAGGGCCCAT 544972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132053661453456