Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=758954 Score = 104 bits (114), Expect = 2e-17 Identities = 115/152 (76%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 71434 TAAAAAGTTTCAGACTTTAGCGAGGAATGAAAACTTTCTATCGGGGCGTTATCAGCAGGT 71493 || || |||||||||||||||| ||||||||| || || ||||| |||||||| || Sbjct 685841 TAGAACGTTTCAGACTTTAGCGTGGAATGAAACGATTA-ATAGGGGCATTATCAGCGGGC 685783 Query 71494 GTTCCCTTTCGGGACATACTTCTGATAATGCCTTTTTCTTCGCATAATTGATAATAAGCA 71553 ||||||| |||||||| || || ||||||||||| ||| || | ||| || Sbjct 685782 GTTCCCTGACGGGACATGCTCATGGTAATGCCTTTTCCTTTTACAGTTTCCTGATACGCC 685723 Query 71554 TAAGATGTATAAACGCTGCCTTGATCACTATG 71585 | ||| || || || ||||||||||| ||||| Sbjct 685722 TGAGACGTGTACACACTGCCTTGATCGCTATG 685691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408575731982264