Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= NC_031062.1 Length=75147 Score E Sequences producing significant alignments: (Bits) Value seq16 82.4 4e-11 >seq16 Length=148473 Score = 82.4 bits (90), Expect = 4e-11 Identities = 77/96 (80%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 41677 TGGTTCGAATCCAGTATCTTCCTCCATCTTCAGG--TCGTTAGCTCAGTTGGTTAGAGCA 41734 ||||||||||||| ||| ||| ||| || | | || |||||||||||||| |||||| Sbjct 25 TGGTTCGAATCCATCATCCTCCACCAGTTTTACGAGTCATTAGCTCAGTTGGT-AGAGCA 83 Query 41735 CCGGACTTTTAATCCGGATGTCATTGGTTCGAGGCC 41770 || ||||||||||| || |||| |||||||| || Sbjct 84 CCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCC 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240332266226976