Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000340395.2_202017-01-18] 4,878 sequences; 38,865,974 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3581 221 1e-51 seq179 206 3e-47 seq1056 201 1e-45 seq123 154 2e-31 seq116 132 6e-25 seq891 125 9e-23 seq57 123 3e-22 seq89 122 1e-21 seq227 113 6e-19 seq1259 107 2e-17 seq368 104 3e-16 seq79 96.9 4e-14 seq484 86.0 8e-11 >seq3581 Length=1496 Score = 221 bits (244), Expect = 1e-51 Identities = 230/299 (77%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||||||||| ||| | |||| | ||||| Sbjct 669 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTT 610 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || |||| |||||||||||| |||||||||||||||||| |||| Sbjct 609 GCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 550 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||||||||| ||||||||||||| ||| | || | |||||| Sbjct 549 AGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAGTCCT 490 Query 869811 CGGTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 |||| || | ||||||| ||||||||| ||||||| ||| ||||| ||||| ||| Sbjct 489 TCAGGTCGTGCAC-CAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCTTG 431 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 ||||||| ||| || | || | |||| ||||| || || || ||||| ||||| || Sbjct 430 TACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTC 372 Score = 203 bits (224), Expect = 4e-46 Identities = 242/319 (76%), Gaps = 12/319 (4%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| |||||||||||||||| |||||| |||||||||||||||| ||||||||| Sbjct 1264 GCCTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATC 1205 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTC-GCATCCGAGCGACGC 868809 | |||||||| ||||||||| | |||||| ||| ||| || || || Sbjct 1204 ATATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCC-AGTGAGTA 1146 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||||||||||||| || ||||||||||||||||||||||| | | |||||||||||| Sbjct 1145 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGAT 1086 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACG-A 868928 ||| |||| || ||||| |||||||| ||||| | ||| ||| | || || || ||| | Sbjct 1085 CAGCTCCACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTC-ACGCA 1027 Query 868929 TGATCTGCCTGGGCACGTCGG----CCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGG 868984 |||| || | ||||| ||| ||| ||||||| || | | ||| ||| | ||| Sbjct 1026 CGATC-GC--GTGCACG-CGGCTCTCCGGCAGCTTGTTCACCAACTTCGAGTACATGAGG 971 Query 868985 CAGGCAAAGTCGCAGTGCA 869003 || || ||||| ||||| Sbjct 970 CACGCGAAGTCCGTGTGCA 952 Score = 143 bits (158), Expect = 3e-28 Identities = 200/278 (72%), Gaps = 3/278 (1%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||| | ||||| ||| || || |||||||||||||||||| Sbjct 949 CCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGGCATGAGGCCGCGCTTC 890 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||||| |||||||| || |||||||| |||||||| || Sbjct 889 TTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCCCTCCACGGCGGCGAAC 830 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 | | || ||||| | || | ||| | | || |||||| | ||||||| Sbjct 829 GCCAGCAGACGCTCCGGGTAG--GACGAAACAC-GAGGGTCACACCACTTGAGCGCCCAG 773 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||| ||| ||| |||| | ||| |||||||| || | | ||| ||||| || Sbjct 772 CGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCAAGTGATCCTTCTCC 713 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATA 869457 | | |||||||| || ||||||||||| ||||| || Sbjct 712 ACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTA 675 >seq179 Length=41763 Score = 206 bits (228), Expect = 3e-47 Identities = 337/481 (70%), Gaps = 17/481 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || ||||| |||||||| || ||||| | |||||||| | || |||||||| Sbjct 20576 CTGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGTTGGA 20635 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||| ||||| | |||| | | |||||| | |||||| | || ||| Sbjct 20636 TGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCATGCTAATGCC 20695 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || |||||| ||||||||||| ||||||||| |||||||||||||| |||||||| Sbjct 20696 AATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCCCTC 20755 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||||||||| ||| |||| ||| || || |||||||| ||||| ||| |||||| Sbjct 20756 AATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGTGCC 20815 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||| ||||||||||||||||| || || ||| | | |||||| || || || Sbjct 20816 GGCGTTAAAGAGCGTGGGCGTCGCGTGCGTAAAGAACATCTGTGACATGAGCTCATACGT 20875 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | ||| |||| | || | | || | | ||||| || || || Sbjct 20876 ---GTGCAGTGCCGCCTGGATGTCTTGCTTGT--GAATACCCA-----GC-----GCCAC 20920 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 |||||||| ||| | |||||| ||||| ||||| ||| ||| | ||||| | Sbjct 20921 GCGCATGATCATCTGCTGGGGGCGCTCCACGACCTTACCGTTCACGCGGAAGAGGTA-GC 20979 Query 1630485 CCGGCGCATG-GTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGG 1630543 | || || | ||| ||| ||| |||||| | |||| || ||||||||| ||||| Sbjct 20980 CTCGCTCAAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTCCCGGTCGTGGATGATGG 21039 Query 1630544 C 1630544 | Sbjct 21040 C 21040 Score = 174 bits (192), Expect = 2e-37 Identities = 337/504 (67%), Gaps = 8/504 (2%) Strand=Plus/Plus Query 1628101 ACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAA 1628160 ||||||||||| |||||||| | |||||||| |||||| || |||||||| Sbjct 20076 ACAAACTTGGGGAGGGCCACAGACGCCAGGTTGCACACCGCCACCTCATCGGGCGACGTG 20135 Query 1628161 AACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| | |||||| ||||| |||| ||| |||| || |||||||||||||| Sbjct 20136 TACTCCATAATCTCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTC 20195 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | | ||||| | |||||||||| |||||| | ||| |||| ||||| |||||||| Sbjct 20196 GACTTGCGGTTGGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATCTGCGCG 20255 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCAC-GACAGTC---CGCGCGCGGCCCTN 1628336 | | |||||| |||| | ||| | |||| || ||| |||||||| |||| Sbjct 20256 TCCAGGATGGCGAACCACAGCTGCTG----GGCATTGATCGTCTTGCGCGCGCGCCCCTC 20311 Query 1628337 NNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGG 1628396 || || | |||| ||||||||| || ||||| Sbjct 20312 CTTCTCGTACTTCTCGTACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCCGGG 20371 Query 1628397 CGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAG 1628456 ||||| || || || || ||| | ||| | || | || ||| || || Sbjct 20372 GGCCTCATTGGGGCAGAAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAACAG 20431 Query 1628457 GTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT 1628516 || |||||| ||||| |||||||||||||| |||| | ||| ||||||||||| Sbjct 20432 ATCGGGGACCCACAGAGCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTT 20491 Query 1628517 CTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAA 1628576 ||| || || || | |||| | ||||||||||||||||||||||||| ||| || Sbjct 20492 CTTGCGCAGCTCCAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAA 20551 Query 1628577 GGCGCCCTTGCGCTTGCCGCCGCC 1628600 | ||| ||||||||||| || || Sbjct 20552 CGAGCCTTTGCGCTTGCCTCCTCC 20575 Score = 138 bits (152), Expect = 1e-26 Identities = 341/508 (67%), Gaps = 22/508 (4%) Strand=Plus/Plus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGG-CGGGCCTGGTGCGCAGATAGTACATGC 1627039 || ||| ||||| ||||||||||||||||| ||||| | ||||| |||||||||| Sbjct 19178 CTTGTCCACGGTGAACTGGATGGCGTCGGCTTTCGGGCGTCC-GCGCATGTAGTACATGC 19236 Query 1627040 CGGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGC--GCTCGGGCGT 1627097 | |||||||| || ||| |||||| |||||| ||||| | || ||| ||| Sbjct 19237 CCGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATGGACGTCA-GCTTGCTAAT-CGT 19294 Query 1627098 CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 || |||||| || | ||| ||||||||||||||| | |||| | || || || Sbjct 19295 CGGGTCGGCAATGTGAATGTTCAGCGACTGGCTCTGGCAAATGTAGGCGCCACGGTCCGC 19354 Query 1627158 CGCCATGTCGATGGTGACCCGG--TTGGGC---ACCTCCCACACGGTCTTGAAGATGGCC 1627212 || || ||| | || ||| || || | ||||||||| |||||| | | || Sbjct 19355 CGACAGGTCCA-----ACACGGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCC 19409 Query 1627213 TTGAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACG 1627272 |||| | | ||| | | | || || |||||| ||||| | || | Sbjct 19410 TTGACCTGGTCCGGAA--TGGATTTCACCTT----CTGCACGGAGCCACCGTCAGCCAGA 19463 Query 1627273 AGCCTGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGG 1627332 | | || ||| | || |||||||| | ||| || | ||||| ||| | |||| Sbjct 19464 ATCTGGTTGCGCACCTCAGGCGTCCAGATGCCCAGCTCGATCAGCTCCTTCATGAGGTAC 19523 Query 1627333 CGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATG 1627392 ||| || | || || || || | ||||||||||| |||| ||||| ||| Sbjct 19524 TTGTTCACGATCGTGAACTCACCAGCCAGCACGCGGCGGTTGTACATGTTCGACGTGTAC 19583 Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 1627452 |||| | ||| ||||||||| ||||| | ||||| || |||||||| | ||| Sbjct 19584 GGCTCGATGGACTCATTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGGCATCGGAGCC 19643 Query 1627453 ACGAGGAGCGAGTTGCGCAGGCCGTGCT 1627480 ||||||||||||||||| | |||||||| Sbjct 19644 ACGAGGAGCGAGTTGCGGATGCCGTGCT 19671 >seq1056 Length=9094 Score = 201 bits (222), Expect = 1e-45 Identities = 276/382 (72%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 1573869 GGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGCATC 1573928 ||| ||||| | |||||| | ||| |||| ||||| || ||||| |||||||| |||||| Sbjct 4474 GGCAACATGACGAACCTCATCCTGTCGGGCCCGCCGGGAACGGGGAAGACCACCAGCATC 4415 Query 1573929 GCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAAC 1573988 |||| ||||||| | || | ||| | || | | |||||||||| || |||||| Sbjct 4414 CTGTGTTTGGCGCGCGAACTGCTAGGCACCAGCGTCAAACAGGCCGTGCTGGAGCTCAAC 4355 Query 1573989 GCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGC-CTCCAA 1574047 ||||| || || |||||| ||||| ||||||| || |||||| || | ||| Sbjct 4354 GCGTCCGATGACCGCGGCATCGACACGGTGCGCACGAAGATCAAGATGTTTGCGCAGCAA 4295 Query 1574048 GAGGATCGAC-CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCC 1574106 ||| ||| || || || || ||||||||| | | ||||| ||||| ||||||| Sbjct 4294 AAGG--TGACGCTACCCCCGGGCCGCCACAAGATTGTGATCCTGGACGAAGCCGACTCGA 4237 Query 1574107 TCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGC 1574166 | || | |||||||| ||||| ||||| ||||||||| | | | ||| ||| Sbjct 4236 TGACAGCCGCGGCCCAACAGGCGCTGCGCCGCACCATGGAGATCTTCTCGGCCACCACGA 4177 Query 1574167 GCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCG 1574226 | || || ||||| ||||||| ||| | | | |||||||| || |||| || ||||||| Sbjct 4176 GGTTCGCGCTGGCCTGCAACAACTCGACTAAGATCATCGAGCCCATCCAGAGCCGCTGCG 4117 Query 1574227 CCATTCTGCGCTTTGTGCGCCT 1574248 |||| || ||||| |||||| Sbjct 4116 CCATCCTCCGCTTCACGCGCCT 4095 >seq123 Length=49567 Score = 154 bits (170), Expect = 2e-31 Identities = 296/431 (69%), Gaps = 4/431 (1%) Strand=Plus/Plus Query 18061 ATGAGCACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGC 18120 |||||||| || ||| | || | ||||| |||||||||||||||||| | ||| Sbjct 3904 ATGAGCACCTTTGGCCGCTTCTTCCGCGTCACAACCTTTGGCGAGTCGCACTGCAAGGGT 3963 Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGT-GCATGCCACTGGCCGAGGCCGACATCCA 18179 || ||||||||| | ||||||||||| |||| || || | || | |||||||||||||| Sbjct 3964 GTGGGCTGCATCGTGGACGGCGTGCCCCCGTCGCTTG-CGCTCACGGAGGCCGACATCCA 4022 Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239 ||| ||| | || ||||| || |||||| || || | || || ||| ||||| Sbjct 4023 GCCACAGCTCACGCGCCGCCGCCCCGGCCAGAGCAAGCTCACGACCCCTCGCGACGAGAA 4082 Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGG 18299 || | || | |||| | ||||| ||||| ||| |||||||||| |||| | | Sbjct 4083 GGACCTGGTGACCATCATGAGCGGCACTGAGAAGGGCTTCACGCTCGGTACGCCGCTGGC 4142 Query 18300 CCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCC 18359 ||||| ||| |||| || ||| ||| || || || ||| | ||||| Sbjct 4143 GCTCTTCGTGCCCAATGAGAACGTGCGCCCCAAGGATTACAAGGAGATGGACGCCGTGCC 4202 Query 18360 GCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCA-TCAAGGCGTCGTCGG 18418 || || |||||||||||||| ||| | |||||||||| | | | | | | Sbjct 4203 CCGCCCGGGCCACGCCGACTACACGTACCAGATGAAGTACGGCACGCGCGCCAGCAGC-G 4261 Query 18419 GCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCG 18478 |||| ||||| | ||||| ||||| | ||||| || | ||||| || |||| Sbjct 4262 GCGGCGGCCGCGCCAGCGCCCGGGAGACTATTGGCCGCGTGGCATCTGGCGCCGTGGCCG 4321 Query 18479 AGAAATGGCTC 18489 ||||||||||| Sbjct 4322 AGAAATGGCTC 4332 Score = 127 bits (140), Expect = 2e-23 Identities = 119/150 (79%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103 |||||| || |||||| || ||||||||| ||||||| ||| | ||||| ||| Sbjct 4747 GAGGACTCCACCGGCGGAGTCGTCACGTGCGTGATCCGCAACGCGCCTGTGGGCCTGGGC 4806 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||||||||| ||||| || |||||| ||| || ||||||||| |||| ||||| || Sbjct 4807 GAGCCGTGCTTCGACAAAATGCAGGCCGTGCTGGCGCACGCCATGATGTCCATCCCAGCT 4866 Query 19164 ACCAAGGGATTCGAGATTGGCAGCGGGTTT 19193 |||||||| |||||||| ||| ||||||| Sbjct 4867 ACCAAGGGCTTCGAGATCGGC-TCGGGTTT 4895 >seq116 Length=50717 Score = 132 bits (146), Expect = 6e-25 Identities = 174/238 (73%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 1178255 GACCGGCCGATCGTGCACCGCGACCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTC 1178314 || |||||||| ||||||| ||||||||| ||||| || | || ||| | ||||| Sbjct 5957 GAGCGGCCGATTCTGCACCGAGACCTCAAGAGCCCCAACTTGTTGGTGGACAAGAACTTT 6016 Query 1178315 ACAATCAAGGTGGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGC-GACGATGAC 1178373 | || ||| || | ||||||||| | |||||| || | || ||| ||| ||||| Sbjct 6017 AACATTAAGTTGTCGGACTTTGGCCTGGCCCGCGTCAAGGCTCACG-TGCAGACCATGAC 6075 Query 1178374 GCGG---TGCGGCACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTC 1178430 | | ||||||||| ||||| |||||||||||| ||| || | || ||| | Sbjct 6076 GGGCAACTGCGGCACGGTCCAGTGGATGGCGCCCGAGGTGCTGGGCAACCAGAAGTACAC 6135 Query 1178431 GGAAAAGGCCGACGTCTACTCGTTTGGCGTCGTCATGTGGGAGATCATCACGCGCAAG 1178488 ||| ||||| ||||||| |||||| || ||||||| ||||||||| ||||| || || Sbjct 6136 GGAGAAGGCTGACGTCTTCTCGTTCGGGATCGTCATCTGGGAGATCGTCACGGGCGAG 6193 Score = 118 bits (130), Expect = 1e-20 Identities = 197/284 (69%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGACCTCA 1349491 ||||||||||| | | ||||||||| | || | ||| || ||||||| ||||||| Sbjct 5925 CGGCCAAGGGCATGTCGTACCTGCACCACTTTGAGCGGCCGATTCTGCACCGAGACCTCA 5984 Query 1349492 AGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCCTGG 1349551 ||||| |||| || |||| ||| | |||| ||| | ||| || | ||||||||||||| Sbjct 5985 AGAGCCCCAACTTGTTGGTGGACAAGAACTTTAACATTAAGTTGTCGGACTTTGGCCTGG 6044 Query 1349552 CGCGCATTAAGG---AGGACAACGCCACGATGACCCGCTGCGGCACGCCCTGCTGGACGG 1349608 | ||| | |||| | | | ||| || | | |||||||||| | |||| || Sbjct 6045 CCCGCGTCAAGGCTCACGTGCAGACCATGACGGGCAACTGCGGCACGGTCCAGTGGATGG 6104 Query 1349609 CGCCCGAGGTCATACGCGGCGAGCGCTACGACGAGCGGGCCGACGTCTACTCATTTGGCA 1349668 |||||||||| | || | || ||| ||| ||| ||||||| ||| || || | Sbjct 6105 CGCCCGAGGTGCTGGGCAACCAGAAGTACACGGAGAAGGCTGACGTCTTCTCGTTCGGGA 6164 Query 1349669 TCATCGCGTGGGAGGTGCTCACGCGCCGCCGCCCCTACGACGGC 1349712 || || |||||| | ||||| || | || ||||||||| Sbjct 6165 TCGTCATCTGGGAGATCGTCACGGGCGAGTGTCCGTACGACGGC 6208 >seq891 Length=11273 Score = 125 bits (138), Expect = 9e-23 Identities = 162/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | || ||||||||||| ||||||||||| || || | Sbjct 10515 GCTTGGCCAGCTCACCAGGGAGCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACA 10456 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | ||||||| |||| | Sbjct 10455 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGA 10396 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG-TTGGAGATGCCCACGTCGGGG 1254521 ||||||||| ||||||||||||| |||||| | | | ||| ||| ||| |||||| Sbjct 10395 TGTCGTTGATGAACGAGTTCATGATCGACAT-GCCGCGCTTGCTGATACCCGTCTCGGGG 10337 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 ||||| || ||||||||||||||| | | ||||||||| Sbjct 10336 TGCACTTGACGCAGCACCTTGTAGATGTAGGTCGAGTACGA 10296 >seq57 Length=67657 Score = 123 bits (136), Expect = 3e-22 Identities = 163/223 (73%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | || ||||||||||| ||||||||||| || || | Sbjct 34415 GCTTGGCCAGCTCACCCGGGAGCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACA 34356 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | |||| || |||| | Sbjct 34355 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATACGCTCGAAGA 34296 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACAT--CGA-CTTGTTGGAGATGCCCACGTCGG 1254519 | ||||||| ||||||||||||| |||||| || |||| || |||||| |||| Sbjct 34295 TATCGTTGATGAACGAGTTCATGATCGACATACCGCGCTTGCTG---ATGCCCGTCTCGG 34239 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 |||||||||| ||||||||||||||| | | ||||||||| Sbjct 34238 GGTGCACCTGGCGCAGCACCTTGTAGATGTAGGTCGAGTACGA 34196 >seq89 Length=55170 Score = 122 bits (134), Expect = 1e-21 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 92603 GGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACGAT 92662 ||||||||| |||||| |||||||||||| | ||| ||||| | ||| | Sbjct 36191 GGCGATCTGCTTGGTGAGGCGCTCCTGCACCTGCAGACGGCGCGAAAAGACCTCGCTCAC 36250 Query 92663 GCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCCTT 92722 ||||| || |||||| ||||| | | |||| |||| | ||| || | ||| |||| Sbjct 36251 GCGCGCGAGCTTGCTGAGGCCCAGCACTTTGCCGTTGGGGATGTAACCGATGTGCACCTT 36310 Query 92723 GCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACGAT 92782 |||| | || |||| || |||||||||||||||||| | | ||||| ||| |||||||| Sbjct 36311 GCCCGTGAACGGCACCATGTGGTGCTCGCACATGGAGTACAGGTCGATGTCCCGCACGAT 36370 Query 92783 CACCATCTCG 92792 ||||||||| Sbjct 36371 GACCATCTCG 36380 >seq227 Length=36120 Score = 113 bits (124), Expect = 6e-19 Identities = 116/148 (78%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 1592150 GACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAG 1592209 ||| |||||||| | ||| || ||| | ||||| |||||||||||| | ||||||||| Sbjct 19346 GACATCGAGCAGGAGATCCTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAG 19287 Query 1592210 CCTCTGCTCGATCTTGG-GTGC---AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCC 1592265 ||||| || ||||| |||| ||| ||||||| |||||| ||||| ||| |||| Sbjct 19286 AGCCTGCTGGA-CTTGGCGTGCGCTAAG---GTGGCCAGCATGATTAAGGGAAAGACGCC 19231 Query 1592266 CGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||| |||| || |||||| Sbjct 19230 CCAGGAGATCCGCGAGACGTTCAACATC 19203 >seq1259 Length=6896 Score = 107 bits (118), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 1178267 GTGCACCGCGACCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGTG 1178326 ||||||||||||||||||||| ||| |||| | || ||| ||| |||| || Sbjct 6057 GTGCACCGCGACCTCAAGTCGAAGAACGTGCTGCTAAACCGCAAGTTCCATGCCAAGCTG 6116 Query 1178327 GCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGCGACGATGACG--CGGTG-CGGC 1178383 |||||||||| | ||||| | | | ||| | |||||||||| || | ||| Sbjct 6117 AGCGACTTTGGCGTCAGCCGCAAGACCCACGTCAACGAGACGATGACGTCTGGCGTGGGC 6176 Query 1178384 ACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGAC 1178443 |||| | |||||| ||||||||| || | ||| || |||||||| ||||||||| Sbjct 6177 ACGCTGCTGTGGACCGCGCCCGAGATCATTGAGGGCAAGAAGTACTCGGAGAAGGCCGAC 6236 Query 1178444 GTCTACTCGTTTGGCGTCGTCATGTGGGAGATCATCACGCGCAAGCAGCC 1178493 |||| ||| |||| ||||| ||| ||||| |||| || ||| ||| Sbjct 6237 ATCTATTCGCTTGGAGTCGTGCTGTCAGAGATGGACACGTGCGAGCCGCC 6286 >seq368 Length=27397 Score = 104 bits (114), Expect = 3e-16 Identities = 172/245 (70%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 1347608 TCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAGA 1347667 || ||||||||||||||||||||||||||||||| |||||| | | | || ||| Sbjct 8056 TCATCCACCGCGACCTCAAGTCGCTCAACGTGCTGCTCGACAACCGGCTGCGTGCGAAGC 8115 Query 1347668 TCTCAGACTTTGGCCTCA--CGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGG 1347724 || |||||||| |||| ||| || | ||||| || | | | || ||| ||||| Sbjct 8116 TCAGCGACTTTGGGCTCAGCCGCGAGCGCTCGGCCGACGACACGATGACCAACGGCGTGG 8175 Query 1347725 GCACCGTGCACTGGTCGGCGCCCGAGGTGCTGTCGGCCGACGGCGACGCCAACCTCTTGC 1347784 |||| ||| ||| ||||||||||| | ||| || |||||| || || | | Sbjct 8176 GCACGCTGCTGTGGACGGCGCCCGAGATCCTG-CG-----CGGCGAGACCTACAGCGAGA 8229 Query 1347785 TGGCCGACGTCTACTCGTTTGGCATCGTCCTGTGGGAGGTGCTCACGCGCCAGAGCCCCT 1347844 ||| ||||| ||||||| | |||||| |||| ||| || |||| | | | |||| Sbjct 8230 AGGCGGACGTGTACTCGTACGCCATCGTGCTGTCCGAGCTGGACACGTGTCTGCCGCCCT 8289 Query 1347845 ACGCG 1347849 |||| Sbjct 8290 TCGCG 8294 >seq79 Length=58383 Score = 96.9 bits (106), Expect = 4e-14 Identities = 100/130 (77%), Gaps = 6/130 (5%) Strand=Plus/Plus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || || ||| | ||||| |||||||||||| | ||||||||| | ||||| || || | Sbjct 11866 CTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGTCGCTGCTGGACCTGTCG 11925 Query 1592228 TG---CAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 || |||| ||||| | ||||||||| ||||| |||||||||||||||||| || Sbjct 11926 TGCGCCAAG---GTGGCTACCATGATCAAAGGCAAATCGCCCGAGGAGATCCGCGCCACT 11982 Query 1592285 TTTAACATCA 1592294 ||| ||||| Sbjct 11983 TTTGGCATCA 11992 >seq484 Length=22162 Score = 86.0 bits (94), Expect = 8e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 1726961 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 1727020 || ||||||||||| |||||| || ||| |||||||| |||||||| ||||| ||||| Sbjct 8480 GATCCGTCGAGGTCCGGGTCGTTGATCAGACCCTTCCATCCGACGGTGGTGCGAGGCTTC 8421 Query 1727021 TCGACATAGGCGCGCATGAC 1727040 |||| ||| |||||||||| Sbjct 8420 TCGAAGTAGACGCGCATGAC 8401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106738888476326