Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001278135.1_202015-09-02] 4,624 sequences; 41,972,889 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq529 390 1e-103 seq4483 251 9e-62 seq1252 181 1e-40 seq1531 179 5e-40 seq422 125 9e-24 seq1015 120 4e-22 seq60 102 1e-16 seq687 89.7 7e-13 >seq529 Length=16363 Score = 390 bits (432), Expect = 1e-103 Identities = 850/1257 (68%), Gaps = 29/1257 (2%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | ||||| ||| || || | ||| || | | |||||| | || || || Sbjct 4442 TTCTTGGCTGGAACCGTGGTGTTGCGCGGGATCAGCTTGGTCATGACTCCGCCAGCCGTC 4501 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || | || |||||||| || | ||||||||| || |||||||| || ||| || | Sbjct 4502 TCCAAGCCTAGAGACAGCGGCGCCACGTCCAACAGCAACAGGTCCTG--CAGCTTGGACG 4559 Query 7007 CCT-----TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCAT 7061 | | ||| | | |||||| || || || || || ||||| || || || || | Sbjct 4560 ACGAGTCATGACCGCTCAGGATGGCCGCCTGCACTGTAGCACCGTACGCTACGGCTTCGT 4619 Query 7062 CGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGAT-AACATTTGTTGA 7120 | ||||| || | || || | |||||||| ||| | || ||| |||| || || Sbjct 4620 CCGGGTTGATGGACTTGAAGAGCTTCTTACCGTTGAAAAAGTC-GATCAACAACTGCTGC 4678 Query 7121 ATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCG 7180 | |||||||| || ||||| || || || | || | || ||||| | | | | ||| Sbjct 4679 ACCTTCGGGATACGCGTCGAGCCGCCCACTAGCACCACCTCGTTCACCTG-GCTCT-TCG 4736 Query 7181 AT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCA 7238 | ||| |||||||| || | | || || ||||| || || || || || Sbjct 4737 ACAGCTTCGAGTCTCGTAGAACCTGCGCCACTGGGTCCATTGTCTTGCGAAAGAATTCAC 4796 Query 7239 TACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATA 7298 ||| || ||||| || || || || ||||||| | | |||||| || || || | Sbjct 4797 CACAAAGATCCTCGAACCGCGCGCGCGTAATGGTAGAGTTGAAATCGACACCATCCAGCA 4856 Query 7299 ACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 ||| ||||| || ||| | ||| || | | || | || ||||| || ||||| | Sbjct 4857 GCGAGTCAATCTCGATGTACGCTTGCGCAGACATCGACAGTGTACGCTTGGCACGCTCGC 4916 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 ||||||| || | ||| || || || |||| ||| | | ||||| || ||| || | Sbjct 4917 ACGCCGTACGCAGACGCCGCAGCGCGCGCGAGTTCACCGTCATATCCTTGCGATGCTTGC 4976 Query 7419 GTTTAAACTCTT---CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCA 7475 | || || |||| || |||| | ||| | || | ||||| ||||| || |||| Sbjct 4977 GCTTGAATTCTTGCACAAAGAACT--CGACG-AGGCGGTTGTCGAAGTCTTCGCCGCCCA 5033 Query 7476 AGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACG 7535 ||| || || || || ||||| || || || ||||| || ||||||| | | | || Sbjct 5034 GGTGCGTGTCGCCTGCCGTCGCCTTCACCTCGAAGATGCCGTCTTCAATAGTAAGAAGCG 5093 Query 7536 AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGT 7595 | || |||||||| || ||||| ||||| || || || ||||| || | | || Sbjct 5094 AGACGTCAAACGTTCCTCCACCAAGGTCGAAGATCAGCACGTTGTGCTCTCCACCCTT-- 5151 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 ||| || |||||||| || ||||| || || || || || || || ||||| || || Sbjct 5152 -CTTGTCCAGACCGTAGGCAATAGCGGCGGCTGTCGGCTCGTTGATGATACGTAGCACGT 5210 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 ||| |||||||| | |||||||| ||||| ||||| ||||| ||||| ||||||| Sbjct 5211 TCAAACCAGCAATGACACCGGCATCTTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGG 5270 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 |||| ||||| || || |||| | | || | |||||| | || | |||||||| || Sbjct 5271 CCGGCACCGTCACCACTGCGTTCTTCACCTGCTTACCAATGTAAGCCTCCGCGATCTCGC 5330 Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTCTTC-AGCCGCAAACTGTTTCGT-TTCACC 7833 ||| ||| || ||||| || || ||||| || || | ||| || | | ||||| Sbjct 5331 GCATCTTGACCAGCACCATGGACGAGATCTCCTCGGGCTGGAAA--GTCACCTGCTCACC 5388 Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCA 7893 || || | || | | || |||| | | | ||| | || ||| ||| ||| Sbjct 5389 TTTGAACTGCACCACCACTTCCGGCTTATTCTCCGGACCTCGAGCCACTTTAAACGGCCA 5448 Query 7894 ATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGC 7953 | | || || || || | |||| | ||||| | ||||| | |||||| | Sbjct 5449 GTGCCTGATGTCCGACTGCACTTCAGGGTCGGTGAACTTGCGCCCGATCAAACGCTTGAC 5508 Query 7954 ATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAG 8013 |||||| || ||||| | | ||||||||| |||||||| |||||||| |||||||| Sbjct 5509 ATCAAACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCCGCGTCGCCGATAAG 5568 Query 8014 ACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTT 8073 || || | ||||| || || ||||| || || ||||| || || || |||||||| Sbjct 5569 GCGCTC---CGTGTCCGTGAAGGCCACGTAGGACGGTGTCGTGCGGTTGCCCTGGTCGTT 5625 Query 8074 CGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCC 8130 |||||| ||||| ||||||||||| ||||| ||||| |||||||| || || || || Sbjct 5626 CGCAATGATTTCCACGCGGTCGTTCTGCCACACGCCCACGCACGAGTAGGTCGTGCC 5682 >seq4483 Length=1584 Score = 251 bits (278), Expect = 9e-62 Identities = 460/673 (68%), Gaps = 6/673 (1%) Strand=Plus/Minus Query 7472 CCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAAC 7531 |||| ||| || || || ||||| || || || || ||||| || | |||||| | | Sbjct 1584 CCCAGGTGCGTGTCGCCAGCGGTGGCCTTCACCTCGAAGATGCCCTCCTCAATGGACAGC 1525 Query 7532 AACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT 7591 | ||| ||||| || || || || |||||||| || || || ||||| ||| || | Sbjct 1524 AGCGACACATCGAAGGTGCCGCCGCCCAGGTCGAAGATCAGCACGTTGCGCTCGCCGCCC 1465 Query 7592 TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 || ||| || || |||||||| ||||| || ||||| || || || || ||||| || Sbjct 1464 TT---CTTGTCCAGGCCGTACGCAATAGCGGCGGCCGTGGGCTCGTTGATGATACGCAGC 1408 Query 7652 CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAG 7711 |||||| || || || | | || || || || || || || ||||| ||||| ||| Sbjct 1407 ACGTTCAGCCCGGCGATGGCACCGGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAG 1348 Query 7712 TAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATA 7771 |||||||| ||||| | ||| |||| | |||| | ||| |||| | | || || | Sbjct 1347 TAGGCCGGTACCGTGATGACGGCGTTCTTGACCTCCTTGCCGATGAAGGCCTCGGCCACC 1288 Query 7772 TCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCA 7831 || ||| ||| | || ||||| || || ||||| || | | ||| || | || Sbjct 1287 TCGCGCATCTTGATGAGCACCATGGACGAGATCTCCTCGGGCTGGAACGTCTTGGACTCG 1228 Query 7832 CCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGAC 7891 || || || | || ||| || || || | || || || | ||| ||| | Sbjct 1227 CCCTTGAACTGCACCGTGATCTGCGGCTTGTCGCCGGCGCCCGGCGACAGCTTGAACGGC 1168 Query 7892 CAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTT 7951 || | || || ||| | || || ||||||| ||||| | |||||||| ||||| Sbjct 1167 CAGTGCTTGATGTCGGCCTGCACGATCGGGTCCGAGAACTTGCGGCCGATAAGGCGCTTG 1108 Query 7952 GCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATA 8011 || || || || ||||| | | ||||||||| |||||||| || || || ||||| Sbjct 1107 GCGTCGAACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCGGCATCACCGATC 1048 Query 8012 AGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCG 8071 || || || | ||||| || || ||||| || || || || || || || |||||| Sbjct 1047 AGGCGCTC---CGTGTCCGTGAAGGCCACGTAGGACGGCGTGGTGCGGTTGCCCTGGTCG 991 Query 8072 TTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCT 8131 || || || || || ||||||||||| ||||| ||||| || ||||| || || || || Sbjct 990 TTGGCGATGATCTCCACGCGGTCGTTCTGCCACACGCCCACNCACGAGTAGGTCGTGCCG 931 Query 8132 AAATCAATACCGA 8144 | || || |||| Sbjct 930 AGGTCGATGCCGA 918 >seq1252 Length=5557 Score = 181 bits (200), Expect = 1e-40 Identities = 442/666 (66%), Gaps = 13/666 (2%) Strand=Plus/Minus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| ||||| | || | ||||| | || | |||||| || | || || | || || Sbjct 662 CGTCGAGAACGTCTGCGCCTTCTTGGTAGGCACCGTCGTGTTACGCGCGATCAGCGTCGT 603 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||| || || || || || |||||||| || ||||||||||| || ||||| Sbjct 602 CATGACACCGCCTGCCGTCTCCAGGCCCAGAGACAGCGGCGTCACGTCCAACAGCAACAG 543 Query 6988 GTCTTGAACAGATTCGTTCCCTTCACCCGTT-------AAGATGGCGGCTTGGACCGTCG 7040 ||| || ||| || ||| | |||| | |||||| || || ||||| | Sbjct 542 GTCCTG--CAGCTTG--TCCGACGAGTCGTTGCCGCCCAGGATGGCCGCCTGTACCGTTG 487 Query 7041 CCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAAT 7100 | ||||| || || ||||| || ||||| || | || || | || || ||||| || Sbjct 486 CGCCGTACGCTACGGCCTCGTCCGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGA 427 Query 7101 AATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTT 7160 | || || | || ||| || | |||||||| || ||||| || || || | || | | Sbjct 426 ACTCAGACAGCAGTTGCTGCACCTTCGGGATACGCGTCGAGCCGCCCACTAGCACCACCT 367 Query 7161 CATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATAC 7220 | ||||| | || | ||| | ||| || | || || || || ||||| Sbjct 366 CGTTCACCTGGCTCTTGGACAGCTTGGCGTCGCGCAACACCTTCTCCACGGGCTCCATGG 307 Query 7221 ATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA 7280 || ||||| |||| ||||| ||||| ||||| || || || |||| | | || Sbjct 306 TCTTTCGGAAGTAGTCGCCGCACAGGTCCTCGAAACGGGCGCGCGTGATGGTCGAGTTGA 247 Query 7281 AATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACG 7340 | || ||||||||||| | ||| || ||||||||| | || |||| ||| || | || Sbjct 246 AGTCCACGCCGTCGTACAGCGAGTCGATTTCAATGTAGGCCTGGGCCGACGACGACAGCG 187 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 | ||||| |||||||| |||||||| || | ||| || || || || |||| | | Sbjct 186 TCCGCTTGGCGCGCTCGCACGCCGTACGCAGACGCCGCAGCGCGCGTTGGTTCTGTGCCA 127 Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG-TGTCGAAGGAGTCTCGAATCG 7459 | || || ||||| || || ||||| | |||| ||| | ||| | ||| Sbjct 126 TGTCCTTGCGGTGTTTGCGCTTGAACTCCTGCACGAAGAACTCG-ACGAGGCGGTTGTCG 68 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || || || |||| ||| || || || ||||| || || || || ||||| || | Sbjct 67 AAGTCCTCGCCGCCCAGGTGCGTGTCGCCAGCGGTGGCCTTCACCTCGAAGATGCCCTCC 8 Query 7520 TCAATG 7525 |||||| Sbjct 7 TCAATG 2 >seq1531 Length=5520 Score = 179 bits (198), Expect = 5e-40 Identities = 428/646 (66%), Gaps = 11/646 (2%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || | |||||| || | || || | || ||||| | ||| || || Sbjct 4878 TTCTTGGTAGGCACCGTCGTGTTACGCGCGATCAGCGTCGTCATGACACCGCCTGCCGTC 4937 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || || || ||||||||||| ||||| || | || |||||||| || ||| ||| || Sbjct 4938 TCCAGACCCAGAGACAGAGGAGTCACATCGAGCAGCAACAGGTCCTG--CAGCTTC--TC 4993 Query 7007 C-------CTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 | | | || | | |||||| || ||||| || || ||||| || || ||||| Sbjct 4994 CGAAGAGTCGTTGCCACTCAGGATGGCAGCCTGGACGGTGGCACCGTAGGCCACAGCCTC 5053 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 || ||||| || | || || | || || ||||| || | || || | | || || Sbjct 5054 GTCCGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGACAGAAGCTGCTG 5113 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | |||||||| || ||||| |||||||| | || | || | ||| | || Sbjct 5114 CACCTTCGGGATACGCGTCGAGCCACCGACAAGGACAACCTCGTGCACCTGGCTCTTGGA 5173 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || | || || || || ||||| |||||||| |||| Sbjct 5174 CAGCTTGGCGTCGCGCAACACCTTCTCCACGGGCTCCATGGTCTTACGGAAGTAGTCACC 5233 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 |||| ||||| ||||| ||||| || |||| | | || |||| ||| ||| | | Sbjct 5234 GCACATGTCCTCGAAACGAGCACGCGTGATGGTCGAGTTAAAGTCAATGCCATCGAACAG 5293 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 || ||||| || ||| | || |||| ||| || | ||| ||||| || ||||| || Sbjct 5294 AGAGTCAATCTCGATGTAGGCCTGGGCCGACGACGAAAGCGTACGCTTAGCACGCTCGCA 5353 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 ||||| || | |||||| ||||||||| |||| | | || || || || || || Sbjct 5354 AGCCGTACGCAGACGACGGAGGGCACGCTGGTTGTCCGTGATGTCCTTGCGGTGCTTGCG 5413 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || ||||| | || |||||| | || | ||||| || |||||||||| ||| Sbjct 5414 CTTGAACTCCTGAGTGAAGTGGTCCACCAGACGGTTGTCGAAGTCCTCACCACCCAGGTG 5473 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || || || ||||| || || || || ||||| || | |||||| Sbjct 5474 CGTGTCGCCAGCGGTGGCCTTCACCTCGAAGATGCCCTCCTCAATG 5519 >seq422 Length=30304 Score = 125 bits (138), Expect = 9e-24 Identities = 450/696 (65%), Gaps = 17/696 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || || |||| ||| || || || ||| || || || || | || Sbjct 14411 TCGAAGTCCTCGCCGCCCAGGTGCGTGTCGCCGTTGGTGGCCAGCACCTCGAACACGCCA 14352 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || ||| | || || ||||| || || ||||||||||||||||| | || ||| Sbjct 14351 CCGTCGATGGCCAGCAGCGTCACATCGAAGGTGCCACCACCCAGGTCAAACACCAGCACG 14292 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | | | ||||| || | ||||| || || || || ||||| || || Sbjct 14291 TTCTTCTCGCCCTGTGCCTTCTTGTCAATGCCGTAGGCAATGGCAGCGGCCGTGGGCTCG 14232 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | || | | || ||||| || || | || || || || || || || Sbjct 14231 TTGATGATGCGCTGCACCG-TGAGTCCAGCGATGGTGCCGGCGTCCTTGGTAGCCTGACG 14173 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| || ||||| ||||| ||||| || | |||| Sbjct 14172 CTGGGCGTCGTTGAAGTAGGCGGGCACCGTCACGACGGCGTCGAATACCTCGCGGCCGAT 14113 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || |||| ||| | ||||| ||||| || ||||| | || | ||| || | ||| Sbjct 14112 GTATCCCTCCGAGATCTGCTTCATCTTGGTGAGCACCATGGCCGAGACCTCCTCGGGCGC 14053 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 |||| | | || || || | ||||| | || | || || ||| | | Sbjct 14052 GAACTCGCGCTTCTCGCCCTTGACCTCAACCTGGATGAAAGGCTT-GCCG--TCCTTGTT 13996 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| | || |||| | ||| | ||| || ||| | ||| |||| | Sbjct 13995 GATGATCTCGTACGGCAGCAGCTTCTTGTCGGACTGCACCGACTTGTCGTTGTACTTGCG 13936 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| || ||||| | || || | || || | ||||| |||| | |||||||| Sbjct 13935 GCCGATGAGGCGCTTGACGTCGAACAGCGTCTTCTCCGGGTTGATGGTGGCCTGGTTCTT 13876 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATT---TTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||||| || || || | || ||| ||||||||||||| || || Sbjct 13875 CGCGCCGTCGCCGATCAGGCGCTCGTCGTTCGAGTCC---CACGCGACGTACGAGGGCGT 13819 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC---GCGGTCGTTTTGCCAGACGCC 8109 | || || || |||||||| || || || || || |||| || | ||| ||| Sbjct 13818 GATACGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTCTGGTCCTTGT---AGATGCC 13762 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 |||||||| || || || || | || || ||||| Sbjct 13761 CACGCACGAGTAGGTCGTGCCCAGGTCGATGCCGAT 13726 >seq1015 Length=11715 Score = 120 bits (132), Expect = 4e-22 Identities = 448/699 (64%), Gaps = 14/699 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| |||| ||| || || || | || | ||||| || ||||| || Sbjct 5581 TCGAAGTCCTCACCGCCCAGGTGCGTGTCACCGCCCGTGGACTTGACCTCGAAGATGCCG 5522 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||| ||||| || ||||| ||||||||||| || ||||| ||| Sbjct 5521 TTCTCGATCGACAGGATCGACACATCGAAGGTACCGCCACCCAGGTCGAAGATGAGCACG 5462 Query 7577 TT------CGTATCGTC---GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 || ||| |||| | | |||| | || || |||||||||| || || ||| Sbjct 5461 TTGCAGGCCGTGCCGTCCGTGCCGGCGTTCGTGTCCAGGCCGTACGCGAGGGCAGCGGCC 5402 Query 7628 GTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 || || || || || ||||| ||| || ||||||||| || | | || || || || Sbjct 5401 GTGGGCTCGTTGATGATACGCTTGAC-GTCCAGGCCAGCGATCGAACCGGCGTCCTTGGT 5343 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 || || || ||| ||||| |||||||| || || || || || || | ||| | Sbjct 5342 CGACTGACGCTGCTGGTCGTTGAAGTAGGCGGGCACGGTGACCACAGCCTGGCTGATGCT 5283 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 || || || | | || || | || ||||| || ||||| || || ||||| Sbjct 5282 CTGGCCCAGGAAGGCCTCGGCCGTCTCCTTCATGCGCAGCAGCACCATGGACGAGATCTC 5223 Query 7807 TTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC 7866 || | | || ||| | ||||| || || || || || |||| | || || | Sbjct 5222 CTCGGGGGTGAAGCTCTTCTTGTCACCCTTGAACTCCACCTCGATCAGGACCTTGTCGTC 5163 Query 7867 AGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGA 7926 |||| | | | | | | | | || || | | ||| | ||| Sbjct 5162 GTCACCCTCCTTGATCGTGAAGGGGAAGTGCTTGGCGTCCTTCTTCACCACCTCGTCGCT 5103 Query 7927 AAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGT 7986 || | | ||||| | |||||| || || || || ||||| ||| ||| ||| | Sbjct 5102 GAAGCTGCGGCCGATGATACGCTTGGCGTCGAACACCGTGTTGGTGGCGTTACCGGCGGC 5043 Query 7987 TTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGA 8046 ||| |||| || || || ||||| ||||| || | || | || ||||| |||| Sbjct 5042 CTGGATCTTGGCGGCCTCACCGATGAGACGCTC---GCTCTCGTTGAAAGCGACCCACGA 4986 Query 8047 TGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGAC 8106 |||||||| || || || | | ||| || || || || || || ||| | ||| || Sbjct 4985 GGGGGTCGTGCGGTTGCCCTCGCTGTTGGCGATGATCTCCACCTGGCCGTCCTTCCACAC 4926 Query 8107 GCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| |||||||| ||||| || || | ||||| ||||| Sbjct 4925 GCCCACGCACGAGTACGTCGTGCCCAGGTCAATGCCGAT 4887 >seq60 Length=176298 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 184205 ACACTCGCGTCACGCACGTTCTTACATTTACCCCTAAGCGGAAAAACACCGTAATGATCA 184264 ||| |||| |||||||||||| | ||| || | ||| ||||| |||||||| |||||| Sbjct 72556 ACAGTCGCATCACGCACGTTCAGAAGTTTGCCGCGAAGAGGAAACACACCGTACTGATCA 72497 Query 184265 CGACCAACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATA 184324 || ||||| |||| |||||||| | || |||| || ||||||||||| || || | | Sbjct 72496 CGTCCAACCACTGCCAGACCAGCCACGGCCAGTGCCTTGGCAGAATCACCCTCAGTCAAA 72437 Query 184325 ATAAGAGTACACTTAC 184340 || || | |||| || Sbjct 72436 ATCAGCGAGCACTCAC 72421 >seq687 Length=41969 Score = 89.7 bits (98), Expect = 7e-13 Identities = 180/265 (68%), Gaps = 8/265 (3%) Strand=Plus/Minus Query 7534 CGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTT 7593 ||| ||||| || ||||| ||||||||||| || | | | | | | ||||| | || Sbjct 21974 CGACACATCGAAGGTACCGCCACCCAGGTCGAAGACGGCGATGACCTTGCCGTCGGCCTT 21915 Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 || | | ||||| || | || || ||||| || ||||| || ||||| || Sbjct 21914 GTCCATG------CCGTAGGCCAGGGCAGCGGCCGTGGGCTCATTGATGATACGGAGCAC 21861 Query 7654 GTTCAGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 || ||| || || || |||||| | || || || || || || ||||| ||||| |||| Sbjct 21860 GTCCAGACCGGCGATC-TTGCCGGCGTCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGT 21802 Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATAT 7772 ||||||| || || ||||| || | |||| ||| || | | || ||| | | Sbjct 21801 AGGCCGGCACGGTGACGACGGCCTGGGTGATGGGCTTGCCCAAGAAGCCGTCGGCGGTCT 21742 Query 7773 CTTTCATTTTGGTAAGAACCATCGA 7797 | ||||| ||||| || ||||| || Sbjct 21741 CCTTCATCTTGGTGAGCACCATGGA 21717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635096089324160