Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001278155.1_202015-09-02] 4,608 sequences; 41,735,089 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq466 306 5e-78 seq4483 233 3e-56 seq1544 167 3e-36 seq264 145 1e-29 seq272 127 3e-24 seq286 123 3e-23 seq951 122 1e-22 seq41 116 5e-21 seq422 102 1e-16 seq174 87.8 2e-12 >seq466 Length=17752 Score = 306 bits (338), Expect = 5e-78 Identities = 1029/1584 (65%), Gaps = 26/1584 (2%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| || || || || ||||| || || || || || Sbjct 5695 GGCATCGACCTGGGCACGACCTACTCGTGCGTGGGCGTGTGGCAGAACGACCGCGTGGAA 5636 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || || |||| ||||| || ||||| || || || || ||||| ||||| || || | Sbjct 5635 ATCATTGCGAACGACCAGGGCAACCGCACGACACCGTCCTACGTGGCCTTCACGGACACG 5576 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || || | || || || || || || ||| || |||||| | ||| || || Sbjct 5575 GAGCGCCTTATCGGCGACGCGGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTG 5516 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | |||||| | || || |||||||| | || |||| || || || Sbjct 5515 TTTGATGTCAAGCGTTTGATCGGGCGCAAGTTCACCGACCCTGAAGTGCAGTCGGACATC 5456 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 | | ||||| | | | |||| | || ||| || ||||||| | | || || | Sbjct 5455 AGGCACTGGCCGTTTAAAGTGGCTCGAGGTCCGGAGAATAAGCCGGA-AGTGGTGGTGCA 5397 Query 195605 TTTCAC-GGTGAGAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 |||| |||||| || | ||| | ||||| || || ||||| |||||| || | | Sbjct 5396 GTTCAAAGGTGAGCAGGTG-ACTTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGGTCA 5338 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| |||| ||||| ||| ||| ||||| ||||| | ||||| ||||| | Sbjct 5337 AGATGCGCGAGATCGCGGAGGCTTACATTGGTAAGCAGGTGAAGAACGCAGTGGTGACGG 5278 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||||||||| || || || | || ||||| | Sbjct 5277 TGCCGGCCTACTTCAACGACTCGCAGCGACAGGCGACCAAAGATGCCGGTGTCATTGCTG 5218 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 || | ||| || | || ||||| || || ||||| || || ||||| || ||||||| Sbjct 5217 GTTTGAACGTGCTACGTATCATCAACGAGCCGACAGCCGCCGCTATTGCCTACGGTCTGG 5158 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||| |||| | ||| | || || ||||||| || || ||||| || ||||||| Sbjct 5157 ACAAG---AAGGGTGGAGAGCACAACGTGCTGATCTTCGACCTTGGTGGAGGAACGTTTG 5101 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 | ||||| ||||| | |||||||| || || ||||| || ||||| || || || || | Sbjct 5100 ACGTCTCGCTTCTTACTATTGAAGACGGCATCTTCGAGGTGAAGGCGACGGCAGGCGACA 5041 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTC 196021 | || || || || ||||| ||||| || || || || ||||| | || ||| Sbjct 5040 CGCACCTGGGCGGCGAAGACTTCGACAACCGCCTCGTCGAGTTCTTTGT-GCAAGAATTC 4982 Query 196022 CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACT 196081 || ||| || || ||||| | | || | | || || || || || | || Sbjct 4981 AAGCGCAAGCATCGCAAGGATATGACGGTGAACTCGCGCGCGCTGCGGCGTCTGCGTACG 4922 Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141 || || || |||||||| || || || || | || ||| | | |||||||| Sbjct 4921 GCGTGCGAGCGTGCCAAGCGTACACTGTCGATGTCTGCGCAAGCGTACATCGAGATTGAC 4862 Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTA 196201 ||| || | || || | || ||| | | || ||||| || || || || || || | Sbjct 4861 TCGCTGCTGGATGGTGTCGATTTCAACTCTACCATTACGCGCGCGCGGTTCGAGGATCTT 4802 Query 196202 AACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAG 196261 ||| || ||| | ||| ||||| || || | || || || || ||| | ||| Sbjct 4801 TGTGGTGAATTCTTTCGCAAGACAATGGACCCAGTGGCGCAGGTTCTACGAGACTCGAAG 4742 Query 196262 ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAG 196321 || ||| |||| | || | || || ||||| || || || ||||| |||||| Sbjct 4741 CTGTCGAAGAGCCAGGTGAACGAGGTGGTGCTAGTGGGCGGCTCGACGCGTATCCCGAAG 4682 Query 196322 ATTCAACAGATGCT-TTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCC 196380 | || ||| || | || | ||| ||||| ||| | | ||| | |||||||| Sbjct 4681 GTGCAGCAGTTGTTGATCGA-CTTTTTCAACGGTAAGAAGCTCTTCAAGTCCATCAACCC 4623 Query 196381 GGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA 196440 ||| ||||| || || || ||||| | || ||||| || || || ||| |||| Sbjct 4622 GGACGAAGCCGTAGCGTACGGTGCTACAGTGCAGGCGGCCATCCTGAGCGGTCATGAC-- 4565 Query 196441 TAATAACGTCCAA-------GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 | | ||||||| || || |||| | || || || || | || || || Sbjct 4564 TCGT--CGTCCAAGCTGCAGGACCTGTTGCTGTTGGACGTGGCGCCGCTGTCTCTAGGCT 4507 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 | || || || || || || ||||| || | || | ||||| || |||| | | Sbjct 4506 TGGAGACGGCTGGCGGAGTCATGACCAAGCTGATCCCGCGCAACACCACGGTTCCAGCCA 4447 Query 196554 AGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| | |||| || || ||||| | || || || | ||||| || ||||| Sbjct 4446 AGAAGGCGC-AGTCGTTCTCGACGTACGCGGACAACCAGTCCGGTGTCTTGATCCAAGTG 4388 Query 196613 TATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGAC 196671 | || || || || || | || || ||| | || || || ||| || ||| Sbjct 4387 TTCGAGGGTGAGCGTTCGATGACCTGTGACAATCATATTCTGGGCAAGTTTAACTTGGAC 4328 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || || || | || | ||||| || || ||| | || ||||| | || | Sbjct 4327 -GGCATCCCGCCCATGCCTCGCGGTGTCCCGCAAATTGACGTGACGTTCGACGTGGATGT 4269 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || ||| | ||||| | || | ||| ||| | | ||||| | ||||| Sbjct 4268 CAACGGCATTTTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCAC 4209 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || || || |||||||| ||| | ||| || || || || || |||||| | || || Sbjct 4208 CATCACGAACGACAAGGGCCGGTTATCTCAGTCCGAGATCGACCGCATGGTTGATGACGC 4149 Query 196852 GGAAAAGTACAGGGAAGAAGACGA 196875 || ||||||| ||| |||| || Sbjct 4148 TGAGAAGTACAAGGACCAAGATGA 4125 >seq4483 Length=1396 Score = 233 bits (258), Expect = 3e-56 Identities = 837/1301 (64%), Gaps = 11/1301 (1%) Strand=Plus/Minus Query 195335 GTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACA 195394 || || || ||||| || || || || ||||| ||| | || ||||| || ||||| || Sbjct 1396 GTGGGCGTGTGGCAGAACGACCGCGTGGAGATCATCGCCAACGACCAGGGCAACCGCACC 1337 Query 195395 ACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAAT 195454 || || || ||||| ||||| || || | || || || | || |||||||| || || Sbjct 1336 ACGCCGTCCTACGTGGCCTTCACGGACACGGAGCGCCTGATCGGTGATGCCGCCAAGAAC 1277 Query 195455 CAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAG 195514 ||| || |||||| | ||| || || || ||||| ||||| ||||| || |||||| Sbjct 1276 CAGGTGGCCATGAACGCGCACAACACGGTGTTCGACGCCAAGCGCCTTATCGGCCGCAAG 1217 Query 195515 TTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGT 195574 || ||||| || || || | ||| || ||| ||||| | | | ||| ||| |||| Sbjct 1216 TTCTCGGACCCGATCGTGCAGGCCGACATCAAGCACTGGCCGT-TCAAGCTGTCGCCGGG 1158 Query 195575 -GTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCC 195633 | | || ||||| ||| | || | || | || ||| || || || Sbjct 1157 CGCCGGCGACAAGCCGCAGATCACGGTGCAGTTCAAGGGCGAGTCCAAGACGTTCCAACC 1098 Query 195634 CGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGG 195693 ||| || || ||||| |||||| | || |||||| ||| || || | ||||| || Sbjct 1097 CGAGGAGATCTCGTCCATGGTGCTTATCAAGATGCGCGAGGTGGCCGAGGCCTTCATCGG 1038 Query 195694 TAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACA 195753 || || || | || || | || ||||| || ||||||| || || || || || Sbjct 1037 CAAGGAGGTCAAGAACGCCGTCATCACGGTACCGGCCTACTTCAACGACTCGCAGCGCCA 978 Query 195754 GGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACC 195813 ||| || |||||||| | ||| || || || || ||| || | || ||||| || || Sbjct 977 GGCCACCAAGGACGCCGGTGCCATCGCCGGGCTGAACGTGCTGCGTATCATCAACGAGCC 918 Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 || || || || ||||| || || ||||||||| |||| || || || || | Sbjct 917 CACGGCCGCCGCTATTGCGTACGGCCTGGACAAG---AAGGGCGGCGAGCGCAACGTGCT 861 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 |||||| || || || || || || || ||||| || || || ||||| | || || Sbjct 860 GATCTTCGACCTGGGCGGCGGCACCTTCGATGTGTCGCTGCTGTCCATTGAGGAGGGCAT 801 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACG 195993 ||||| || ||||| || ||||| || || || || || || || || ||||| || Sbjct 800 CTTCGAGGTGAAGGCCACCGCTGGCGACACGCACCTGGGCGGCGAGGACTTCGACAACCG 741 Query 195994 TCTTCTC-CGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAA 196052 || || || || || | |||||| || || | || || || | | Sbjct 740 CCTCGTCGAGTTCTTCGT-GCAGGAGTTCAAGCGCAAACACCGCAAGGACATGGCACAGA 682 Query 196053 ATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTT 196112 | | | || || || || || | || || || || || ||||| || || || || | Sbjct 681 ACCAACGCGCGCTGCGGCGTCTGCGTACGGCGTGCGAGCGCGCCAAGCGGACGCTGTCGT 622 Query 196113 CTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAA 196172 | |||| || | |||| || || ||| ||| ||||| | |||||| | | | Sbjct 621 CGTCGGCCCAGGCCTACATTGAAATCGACTCGCTGTACGACGGCGTGGACTTCAACTCGA 562 Query 196173 CTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAAC 196232 | || || || || ||||| || || | | || | || | ||| ||||| | Sbjct 561 CCATCACGCGCGCCCGTTTCGAGGACCTGTGCGGCGACTACTTCCGAAAGACCATGGAGC 502 Query 196233 CTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAG-TCTAAGGTTGATGAAATTGTC 196291 | || || | || | || ||||| ||| || ||| | |||| | || | || Sbjct 501 CCGTGGAGAAGGTGTTGCGCGACGCCAAGCTGTCCAAGAGCCNAGGTGAACGAGGTGGTG 442 Query 196292 CTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAAT 196351 || ||||| || || || ||||| |||||| | || || |||| ||| |||||||| Sbjct 441 CTAGTGGGCGGCTCGACGCGTATCCCGAAGGTGCAGCAACTGCTGTCTGAGTTCTTCAAC 382 Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTT 196411 || || ||||| | ||||||||||| || || || || || || || | || Sbjct 381 GGCAAGGAGCCCAACAAGTCCATCAACCCGGACGAGGCCGTAGCGTACGGCGCAACGGTA 322 Query 196412 CAGGCTGCTATTCTCTCAGGTGTTGAC---AATAATAACGTCCAAGATCTTCTGCTACTT 196468 ||||| || || || || ||| | || | || || || |||| | Sbjct 321 CAGGCGGCCATCCTGGGCGGCAACGACTCGTCGGACAAGCTGCAGGACCTGTTGCTGTTG 262 Query 196469 GATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATT 196528 || || | || | || ||||| || || || || || ||||| ||||| | | || Sbjct 261 GACGTGACGCCGCTGTCTCTGGGCCTGGAGACGGCAGGCGGTGTCATGACGACGCTGATC 202 Query 196529 GATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAAT 196588 | | ||||| || | || || ||||||| || || || ||||| | || || Sbjct 201 GCGCGTAACACGACGGTGCCTACCAAGAAGGCGCAGACGTTCTCGACGTACGCGGACAAC 142 Query 196589 CAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTC 196629 ||||| ||||| | || || || | || || || ||||| Sbjct 141 CAACCTGGTGTGCTCATCCAGGTGTTCGAGGGCGAGCGCTC 101 >seq1544 Length=5520 Score = 167 bits (184), Expect = 3e-36 Identities = 614/961 (64%), Gaps = 3/961 (0%) Strand=Plus/Minus Query 195920 ATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAA 195979 ||||| | || || ||||| || ||||| || ||||| || || || || |||||||| Sbjct 5518 ATTGAGGAGGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACACGCACCTGGGTGGTGAG 5459 Query 195980 GATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAA 196039 || ||||| ||||| | || || || | |||||| || ||| | || Sbjct 5458 GACTTCGACAACCGTCTGGTGGACCACTTCACTCAGGAGTTCAAGCGCAAGCACCGCAAG 5399 Query 196040 GATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA 196099 || || | | || | | || || ||||| || | || || || || ||||| || Sbjct 5398 GACATCACGGACAACCAGCGTGCCCTCCGTCGTCTGCGTACGGCTTGCGAGCGTGCTAAG 5339 Query 196100 CGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATT 196159 || || || || || |||| || | | |||||||| || |||| || || ||| Sbjct 5338 CGTACGCTTTCGTCGTCGGCCCAGGCCTACATCGAGATTGACTCTCTGTTCGATGGCATT 5279 Query 196160 GACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGG 196219 ||||| | | || || || || || ||||| || || | | ||| | || | Sbjct 5278 GACTTTAACTCGACCATCACGCGCGCCCGTTTCGAGGACATGTGCGGTGACTACTTCCGT 5219 Query 196220 AAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTT 196279 ||| ||||| || || || | || | || ||||| ||| || ||| |||| Sbjct 5218 AAGACCATGGAGCCCGTGGAGAAGGTGTTGCGCGACGCCAAGCTGTCCAAGAGCCAGGTG 5159 Query 196280 GATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCT 196339 | || |||||||||| || || || || ||||| |||||| | || ||| | || || Sbjct 5158 CACGAGGTTGTCCTTGTCGGTGGCTCGACGCGTATCCCGAAGGTGCAGCAGCTTCTGTCC 5099 Query 196340 AGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTAT 196399 ||||||||| || || ||||| | ||||||||||| || || || || || Sbjct 5098 GACTTCTTCAACGGCAAGGAGCCCAACAAGTCCATCAACCCGGACGAGGCTGTGGCCTAC 5039 Query 196400 GGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT---AATAACGTCCAAGAT 196456 ||||| |||| |||||||| || || || ||| | | || | || || Sbjct 5038 GGTGCCACCGTCCAGGCTGCCATCCTGAGTGGCAACGACTCTTCGGAGAAGCTGCAGGAC 4979 Query 196457 CTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATG 196516 || |||| || ||||| | || | || |||||||| || || || || ||||| ||| Sbjct 4978 CTGTTGCTGCTCGATGTGACTCCTCTGTCTCTGGGTCTGGAGACGGCAGGCGGTGTCATG 4919 Query 196517 ACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACG 196576 || | | || | | ||||| || | || || |||||| || || || ||| Sbjct 4918 ACGACGCTGATCGCGCGTAACACGACGGTGCCTACCAAGAAGTCGCAGACGTTCTCGACG 4859 Query 196577 TATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCA 196636 || | || || ||||| ||||| | ||||| || | || || || ||||| | Sbjct 4858 TACGCGGACAACCAACCTGGTGTGCTCATTCAGGTGTTCGAGGGCGAGCGCTCGATGACC 4799 Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 || ||| | || || || | ||| | || || || || | || | ||| Sbjct 4798 CGTGACAACAACCTGCTGGGCAAGTTCAACCTGGACGGCATCCCGCCCATGCCTCGTGGT 4739 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 ||||| |||||| |||| ||||| || ||||| || || || || ||||| | || Sbjct 4738 GTTCCCCAGATTGATGTGACGTTCGACATCGACGCGAACGGGATCCTGAACGTGTCGGCC 4679 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 | ||| ||| | | ||||| | ||||| || || || |||||||| || || Sbjct 4678 GTGGAGAAGTCGACGGGCAAGGAGAACAAGATCACCATCACGAACGACAAGGGCCGACTG 4619 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 || || || || || || ||||| || || || ||||||| | || |||||| Sbjct 4618 TCGCAGTCCGATATCGACCGCATGGTGGCGGAGGCCGAGAAGTACAAGTCGGAGGACGAG 4559 Query 196877 G 196877 | Sbjct 4558 G 4558 >seq264 Length=48808 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || | || || || || |||||| | || || ||| |||| Sbjct 15780 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 15721 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 15720 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 15661 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 15660 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 15601 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||||||||| || ||||| || || | || || || ||| Sbjct 15600 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGT 15553 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || |||||| | || || ||| |||| Sbjct 16008 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 15949 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 15948 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 15889 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 15888 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 15829 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||||||||| || ||||| || || Sbjct 15828 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCT 15797 >seq272 Length=47053 Score = 127 bits (140), Expect = 3e-24 Identities = 389/586 (66%), Gaps = 19/586 (3%) Strand=Plus/Plus Query 77933 GGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGA 77992 |||||| || ||||| || || | | ||||||| || | | |||||||| Sbjct 20840 GGAAAGGTCGTGGAGCGCCCCCAGCAGATGATCATGCGCGTGGCGCTGGGTATTCACAAG 20899 Query 77993 AATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCA 78051 | || || | |||| ||| | |||||||| ||||| || || | |||| || Sbjct 20900 CAAGACATCCAGGCGGCACTGCACACGTATGAGCTCATGTCACAGATGT-TCTTTACGCA 20958 Query 78052 CGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCT 78111 ||| || || || | ||||| || || || || ||||| ||| |||| || |||||||| Sbjct 20959 CGCGACGCCCACGCTCTTTAACGCCGGCACGCCGCGTCCGCAGCTGTCGTCGTGTTTCCT 21018 Query 78112 ACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCA 78171 || || | |||| ||||| ||| | || || |||| || |||| |||| || Sbjct 21019 GCTGGCCATGCAGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGCAGTGCGCGTG 21078 Query 78172 GATTTCTAAGTGGGCTGGTGGTATAGGTCTTCA-TATTCACGATGTTCGTGCAAACAAGT 78230 || || |||||||| || ||||| || | ||| ||| ||| | | || || | || Sbjct 21079 CATCTCCAAGTGGGCCGGAGGTATTGG-CATCAGTATGCACAACATCCGCGCCACGAACA 21137 Query 78231 CCAGGATTAGAGGAACTAATGG-TCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTC 78289 | || | || || || || ||| || | || || || || ||||| ||||| ||| Sbjct 21138 GCTACATCCGCGGCACGAACGGATCA-TCCAACGGGATCATCCCCATGCTGAGGGTCTTC 21196 Query 78290 AATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGGGGTCATTCGCTATG 78346 |||| || || |||||||| |||| | || | | | || || || ||||| || Sbjct 21197 AATGACACGGCCCGCTATGTGGACCAGGGAGGAGGCAAGCGCAAAGGCTCGTTCGCCATC 21256 Query 78347 TACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGT 78406 ||||| || || ||||||||||| || | || || |||| || || ||||| || Sbjct 21257 TACCTGGAGCCGTGGCACGCCGACGTGTTCGAGTTCCTGGAGCTGCGCAAGAACCACGGC 21316 Query 78407 GACGAG--GAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTA 78464 ||||| | | | || || | || | ||| ||| ||||| | || ||||| || | Sbjct 21317 AACGAGCTGCACCGCG-CGC-GCGACCTCTTCTACGCTCTGTGGGTCCCCGATCTGTTCA 21374 Query 78465 TGAAGAGAGTTGAGGAAG-GA--GGTAAATGGTCTCTTTTCTGTCC 78507 ||||| | || ||||| || || || ||| |||||||| || Sbjct 21375 TGAAGCG---TGTGGAAGCGAACGGCAAGTGGAGCCTTTTCTGCCC 21417 >seq286 Length=49466 Score = 123 bits (136), Expect = 3e-23 Identities = 209/299 (70%), Gaps = 13/299 (4%) Strand=Plus/Minus Query 198659 TTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGC 198718 ||||||||| |||||||||||||| ||| | ||| || || || || || || | || Sbjct 4550 TTTCATCGAAATGTTCGTTGGTGTGGGTCCCTCGCGTGTACGTGACCTGTTCAAGGAGGC 4491 Query 198719 ACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTG-----GTAAG 198773 || | || ||||| || | ||||| ||||| ||||| ||||| | | | | Sbjct 4490 TCGCGCGAACGCTCCATGCATTGTGTTCATCGATGAAATTGATGCTGTGGCCCGTGCACG 4431 Query 198774 AAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTT 198833 |||| || | |||| || | | || ||||| |||||||| | ||| | |||||||| Sbjct 4430 AAGCAAGG-GCAACTTCTCCGGC-GGCAATGACGAGCGTGAAAACACGCTCAACCAGCTG 4373 Query 198834 CTCACTGAGATGGATGGTTTTGAC---AATGAGACTGGTATCGTGGTGATTGCTGCTACA 198890 || |||||||||||||| || | |||| ||| | |||||| |||||| ||| Sbjct 4372 CTGGTGGAGATGGATGGTTTCAACTCGAGTGAG---GGTGTGGTGGTGCTTGCTGGTACG 4316 Query 198891 AATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCGTAAGAT 198949 || | ||||| || || | || | || |||||||||||||||||||| |||| Sbjct 4315 AACCGCGCCGATATACTTGACAAGGCCATCCTGCGTCCCGGTCGATTCGACCGGCAGAT 4257 >seq951 Length=8265 Score = 122 bits (134), Expect = 1e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 3567 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 3626 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || |||||||||||||| || || ||| Sbjct 3627 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCAG 3686 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | ||||||||| Sbjct 3687 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGATTACAAC 3746 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 3747 ATCCAGAAGG 3756 >seq41 Length=72855 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 20312 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 20253 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 20252 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 20193 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 20192 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 20133 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | ||||| || || Sbjct 20132 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTTCGCGGCGG 20086 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 20540 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 20481 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 20480 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 20421 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 20420 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 20361 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | || || ||||| Sbjct 20360 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 20314 >seq422 Length=30576 Score = 102 bits (112), Expect = 1e-16 Identities = 384/594 (65%), Gaps = 20/594 (3%) Strand=Plus/Plus Query 196268 AAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAA 196327 ||||| |||| || || ||||| || ||||| || || |||||||| || ||| | || Sbjct 14964 AAGTCGGAGGTGGACGAGATTGTGCTGGTGGGCGGTTCGACCCGTATCCCCAAGGTGCAG 15023 Query 196328 CAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTTAAACAAAACGA----TCAACCCG 196381 ||| || | | || || |||||| ||||| | || | ||||| Sbjct 15024 CAGCTGAT--CAAGGACTACTTCAACGGCAAAGAGC----CCTCGCGCGGTGTGAACCCC 15077 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT 196441 || || || ||||| || ||||| || || |||| | ||| || |||| || | Sbjct 15078 GACGAGGCTGTTGCCTACGGTGCTGCTGTGCAGGGCGGTATCCTG---GGTGGCGAGCAG 15134 Query 196442 AATAACGT--CCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | || | ||||| | | || || | ||||| | || | |||| |||| |||| Sbjct 15135 GACGACCTGACCAAGGACGTGCTTCTGATCGATGTGGTGCCTCTGTCCCAGGGTATTGAG 15194 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || | |||||| || ||||| || | ||| | | ||||| || ||||| |||||| Sbjct 15195 ACTGTGGGTGGCGTCATGACCAAGCTCATTAACCGCAACACTGTGATCCCGACCAAGAAG 15254 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 || ||| || || || || || || || | ||| | ||| || || | || Sbjct 15255 TCGCAGACCTTCTCGACCTACCAGGACAACCAGCCCGCTGTGCTTATCCAGGTGTTCGAG 15314 Query 196619 GGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || || || | || || | ||||| |||| ||| || || | ||||| | || || | Sbjct 15315 GGCGAGCG-TGCCATGACCAAGGACAACCGTCTTCTGGGCAAGTTCGAGCTCACTGGCCT 15373 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 || | || || | ||||| || |||||| | || ||||| || ||||| || || Sbjct 15374 GCCGCCCGCCCCGCGTGGTGTGCCCCAGATTGAGGTGACGTTCGAGATTGACGCCAACGG 15433 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 || || | || | ||||||||||||| | ||||| | || | ||| ||| || Sbjct 15434 TATCCTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCACGATCAC 15493 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| || || || ||||||| || || || ||||| || || || Sbjct 15494 TGCCGAGAAGGGCCGTCTGTCGCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 15547 >seq174 Length=59900 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/71 (90%), Gaps = 4/71 (6%) Strand=Plus/Minus Query 167232 GTGGGGTTTGAACCCACG-AGACTTGC--GTC-AGCGGGTCTTAAGTCCGCCCCCTTAGA 167287 |||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||| Sbjct 477 GTGGGGTTTGAACCCACGCAGACTGGAATGTCTAGCGGATCTTAAGTCCGCCCCCTTAGA 418 Query 167288 CCACTCGGGCA 167298 ||||||||||| Sbjct 417 CCACTCGGGCA 407 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/71 (90%), Gaps = 4/71 (6%) Strand=Plus/Minus Query 167232 GTGGGGTTTGAACCCACG-AGACTTGC--GTC-AGCGGGTCTTAAGTCCGCCCCCTTAGA 167287 |||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||| Sbjct 1113 GTGGGGTTTGAACCCACGCAGACTGGAATGTCTAGCGGATCTTAAGTCCGCCCCCTTAGA 1054 Query 167288 CCACTCGGGCA 167298 ||||||||||| Sbjct 1053 CCACTCGGGCA 1043 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/71 (90%), Gaps = 4/71 (6%) Strand=Plus/Minus Query 167232 GTGGGGTTTGAACCCACG-AGACTTGC--GTC-AGCGGGTCTTAAGTCCGCCCCCTTAGA 167287 |||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||| Sbjct 1549 GTGGGGTTTGAACCCACGCAGACTGGAATGTCTAGCGGATCTTAAGTCCGCCCCCTTAGA 1490 Query 167288 CCACTCGGGCA 167298 ||||||||||| Sbjct 1489 CCACTCGGGCA 1479 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/71 (90%), Gaps = 4/71 (6%) Strand=Plus/Minus Query 167232 GTGGGGTTTGAACCCACG-AGACTTGC--GTC-AGCGGGTCTTAAGTCCGCCCCCTTAGA 167287 |||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||| Sbjct 2082 GTGGGGTTTGAACCCACGCAGACTGGAATGTCTAGCGGATCTTAAGTCCGCCCCCTTAGA 2023 Query 167288 CCACTCGGGCA 167298 ||||||||||| Sbjct 2022 CCACTCGGGCA 2012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657824507125760