Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001278155.1_202015-09-02] 4,608 sequences; 41,735,089 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq272 291 9e-74 seq3014 154 2e-32 seq47 149 7e-31 seq219 107 2e-18 >seq272 Length=47053 Score = 291 bits (322), Expect = 9e-74 Identities = 547/788 (69%), Gaps = 26/788 (3%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||| || ||||||| ||| | ||| | || ||| | | | ||||| Sbjct 20871 TCATGCGCGTGGCGCTGGGTATTCACAAGCAAGACATCCAGGCGGCACTGC-ACACGTAT 20929 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 || | ||| || | || |||||||||||| ||||| || || || ||||| || ||| Sbjct 20930 GAGCTCATGTCACAGATGTTCTTTACGCACGCGACGCCCACGCTCTTTAACGCCGGCACG 20989 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | || ||| ||||| || |||||| |||| ||| |||| |||||||| || ||| Sbjct 20990 CCGCGTCCGCAGCTGTCGTCGTGTTTCCTGCTGGCCATGCAGGACGACTCGATTGAGGGC 21049 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| ||||||||| |||| || ||||||||||||| | || ||||| || ||| Sbjct 21050 ATTTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCCGGAGGTATTGGCATC 21109 Query 53432 CAC-TGCTCGAACGTCCGTGC---GAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487 ||| | ||| |||| || |||| || || ||| || |||||||| | Sbjct 21110 AGTATGCAC-AACATCCGCGCCACGAACAGCT-AC--ATCCGCGGCACGAACGGATCATC 21165 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | | || ||| | || ||||| | |||||||| |||||||||| || || ||||||| Sbjct 21166 CAACGGGATCATCCCCATGCTGAGGGTCTTCAATGACACGGCCCGCTATGTGGACCAGGG 21225 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 || || |||||||| || ||||||||||||||||| |||||||||||||||||| | | Sbjct 21226 AGGAGGCAAGCGCAAAGGCTCGTTCGCCATCTACCTGGAGCCGTGGCACGCCGACGTGTT 21285 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC---CGTGACCT 53664 ||||| || |||||||| ||| || || | | ||| ||| | || || ||||| Sbjct 21286 CGAGTTCCTGGAGCTGCGCAAGAACCACGG---CAACGAGCTGCACCGCGCGCGCGACCT 21342 Query 53665 GTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGT 53723 || ||| ||||||||| | || || || |||||| | ||||| | ||| ||| Sbjct 21343 CTTCTAC-GCTCTGTGGGTCCCCGATCTGTTCATGAAGCGTGTGGAAGCGAACGGCAAGT 21401 Query 53724 GGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTGAGGAGTTT 53782 || ||| | ||||| || ||| |||||| ||| | | ||| || || || ||||| Sbjct 21402 GGAGCCTTTTCTGCCCCAATGAGGCCCCCGGACTCTACGAGTG-CTGGGGCGACGAGTT- 21459 Query 53783 AACGAGA---TGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 ||||| |||| || ||||| |||| ||| |||| | |||| || Sbjct 21460 --CGAGACTCTGTACGAGAAGTACGAGAAGGAGGGGCGCGCGCGCAAGACGATCAATGCC 21517 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| || ||||| | ||| | |||||||| ||||| |||| Sbjct 21518 CAGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATTGAGACGGGCGTGCCGTTCATGCTG 21577 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGC 53959 |||||||| ||| |||| ||| |||||| ||||| ||||| ||| |||||| Sbjct 21578 TACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCTCGAGC 21637 Query 53960 AACTTATG 53967 ||||| || Sbjct 21638 AACTTGTG 21645 Score = 205 bits (226), Expect = 1e-47 Identities = 566/849 (67%), Gaps = 53/849 (6%) Strand=Plus/Plus Query 55106 AAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAAT 55165 ||||| |||| ||||| || ||||| |||||| ||||| |||||| ||| || Sbjct 21749 AAGCTGTACGAGGTGACCAAGGTGGTGACCCGGAACTTGAACAAGGTCATTGACGTCAAC 21808 Query 55166 TACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCGGT 55225 |||||||| || | |||||||||||||||| | || ||||| || | | || || Sbjct 21809 TACTACCCCGTGGAGGAGGCGCGCAAGTCCAACATGCGCCACCGCCCGGTTGGTATTGGC 21868 Query 55226 GTACAGGGCTTGGCCGA--CATCT-TCATGATGCTCGGATTGCCCTTCGA---CTCGGAA 55279 || ||||| | || || ||| | || | ||| | ||| ||||| | || || Sbjct 21869 GTCCAGGGTCTCGCGGATGCATTTATCCTCATGAACTA--TGCG-TTCGAGAGCCCGCAA 21925 Query 55280 CCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGA 55338 || || ||| | ||| | |||||||| || || ||||||| || | | ||| Sbjct 21926 ---GCCCGTGAACTCAACATGAACATCTTCGAGACG-ATCTACTACGCTTCTATGGAGAC 21981 Query 55339 GTCGT--GTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCT 55396 ||| | ||| | | | |||| ||| | ||||||||||||| | ||||| || Sbjct 21982 CTCGATGGAGATC-GCCAAGGAGCT-GGGCCCGTACGAGACGTTCCAGGGATCGCCTGCC 22039 Query 55397 GACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCCCATGTTTGA-CAAGTT 55455 |||||| | |||||||||| | |||||| ||| ||||| | || | | || Sbjct 22040 AGCAAGGGTATCTTCCAGTTCGACATGTGGGGC--GTC--ACCCCGTCTTCGGGCTTGTG 22095 Query 55456 G---------------AAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGT 55500 | ||| | || | | | ||| | |||||||| || ||||| Sbjct 22096 GGATTGGGCTGCGCTCAAGGAGAACGTGATCAAGCACGGCATCCGCAACTCGCTCCTCGT 22155 Query 55501 GGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCC 55560 ||| || ||||| || ||||||||||||||||| |||||||||| ||| | ||||||| Sbjct 22156 GGCTCCGATGCCCACTGCGTCGACGGCTCAGATTTTGGGCAACAATGAGTCCATCGAGCC 22215 Query 55561 GTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATC---AA 55617 ||||||| | ||||| ||| ||||| || || ||||||| ||| |||| || Sbjct 22216 GTACACGTCGAACATGTACAACCGCCGCGTGCTGGCTGGTGAGT---TCACGATCGTGAA 22272 Query 55618 CAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGAT---CAAGAC 55674 |||| ||||| | ||||| ||| || | || |||| || || | ||| | Sbjct 22273 CAAGTACCTCATGAAGGAGCTGATCGAGCTGGGCATCTGGACGCCTGAGGTGCGCAA-CC 22331 Query 55675 GGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGA---GATTCCTCTGCGTCTCAA 55731 ||| || || | |||| || ||||| ||||| || | ||||| | |||| Sbjct 22332 AGATTCTG-GCTG-ACGGTGGCTCCGTGCAGAAGGTGAAATCCATTCCGGACCAGGTCAA 22389 Query 55732 GGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGA 55791 ||||| ||| ||||||||||||||| |||||| || | ||| || || || Sbjct 22390 GGAGAAGTACAAGACGGTGTGGGAGATCAAGCAGAAGGCCGTGTTGGACCTGTCGGCGGA 22449 Query 55792 TCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACT 55851 ||||| || ||||| |||| |||||| |||||||| ||| | | || | | Sbjct 22450 CCGTGGCGCCTACATTTGCCAGAGCCAGTCGCTGAACATTCACATTGCCGACCCGACGAT 22509 Query 55852 GGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTA 55911 |||| ||| || |||||||| |||| ||||||||||| ||||||||||| ||||| Sbjct 22510 TAGCAAGCTGACGTCCATGCACTTCTACGCCTGGAAGAAGGGGCTCAAGACGGGCATGTA 22569 Query 55912 CTATCTGCG 55920 ||| |||| Sbjct 22570 CTACATGCG 22578 >seq3014 Length=1496 Score = 154 bits (170), Expect = 2e-32 Identities = 560/860 (65%), Gaps = 25/860 (3%) Strand=Plus/Minus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||| || || || || || ||||| || || ||||||||||| || | || |||||| | Sbjct 1262 CTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 1203 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATA--GGCTTCTCCCCAAACTGTGC- 74572 |||||||||||||| |||||||| | ||| || || | | ||| | || | Sbjct 1202 ATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCC---AGTGAGTA 1146 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632 || ||||| || ||||| || | |||||||| ||| | | | ||||||||| Sbjct 1145 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGAT 1086 Query 74633 GAGTTTGCACGGC-AGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGA 74691 || | ||||| || | ||| | | ||||| ||| | | | ||| | | Sbjct 1085 CAGCTC-CACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTCACGCA 1027 Query 74692 CAATCTTGTGAATG----TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAA-GCGT 74746 | ||| ||| | | ||| || || ||| | | || | ||||| | | | Sbjct 1026 CGATCGCGTGCACGCGGCTCTCCGGCAG----CTTGTTCACCAACTTCGAGTACATGAGG 971 Query 74747 CACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAG 74806 |||| | || ||| ||| ||| || || | ||| || | || ||||| || || Sbjct 970 CACG-CGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAG 912 Query 74807 GCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAA 74866 |||||||| || || |||||||| | ||| ||||||| ||||||||||| |||||| Sbjct 911 ACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAA 852 Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAG--TC 74924 ||||| || || || || || | || || | || | | | | | | || || Sbjct 851 AATGCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTC 792 Query 74925 ATCCAAGTCTGAGC-CCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTT 74982 | | | | ||||| || | | ||| | | |||| |||| || ||||| || Sbjct 791 ACACCACT-TGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCAC 733 Query 74983 GGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 | | | | ||||||| ||| ||||||| | | |||| |||| || |||||| Sbjct 732 GCAGCAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACA 673 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 |||||| || || |||| || ||| |||| | ||||||| | || ||||| | Sbjct 672 CCTCCGAGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGC 614 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 | || || || || || ||||| | | ||||| | ||||||||||| ||| Sbjct 613 ACTTGCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCA 554 Query 75162 GCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAA 75221 ||||| || || || || ||||| ||||||||||| | ||| || || || |||| Sbjct 553 GCGAAGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAG 494 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTT 75281 ||||||||||| | ||| || | ||||||| |||||||||| | | |||||| Sbjct 493 TCCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTC 434 Query 75282 TTGTACAAAGACCACAAGTC 75301 ||||||| ||||| ||| Sbjct 433 TTGTACATCTGCCACACGTC 414 >seq47 Length=176558 Score = 149 bits (164), Expect = 7e-31 Identities = 310/452 (69%), Gaps = 15/452 (3%) Strand=Plus/Minus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| || ||||| ||||| || ||||||| || | |||||| | || ||| |||||| Sbjct 73640 AACCC-GTACCGATCCCCTCCGCGCCATTCACGAGCAGCATCGGGATGATAGGCACGTAG 73582 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 | |||| || || | | ||| ||||| ||||| | | ||||| ||| ||| Sbjct 73581 TGCACAGGTTCAACTGGGAAACCATCGTCGTCTGCGTACCGCAATAGCGCATCGTC-CTC 73523 Query 117269 GGATCGAATATGTTCTTGGTCCACGGTGCT-----AGGCGAGTGAAAATGTAACGAGAGC 117323 ||| | | | | | | ||||| || | ||||| |||||||||| || Sbjct 73522 C--TCGGGAAAGAGCAAG--CGAGTGTGCTTTTGGAGCAGCGTGAAGATGTAACGAGGGC 73467 Query 117324 TTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGT 117383 | || ||||||||||| || ||||| ||||||||||| || || | ||| || Sbjct 73466 TAGCGGCATCCTTGCCTCCTTGCAGACGGGTACCGAATTGACCTGAAGGATACAACAGCG 73407 Query 117384 TCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCG 117443 |||||||||| ||||| || | || |||| |||||||||||| || || | Sbjct 73406 GAAGGTTGTTGGATCCCACGAAATCCTGCGCCATGTTGACAATCGTCGAGTGCAGTGAAG 73347 Query 117444 CCTCACCATGGTGATACGCCGTCTGCTC-CGCCACGTAGCCCGCCAGCTGAGCCACCTTC 117502 | || |||||||| || ||||| ||||| | || ||||||||||||||| |||||||| Sbjct 73346 CTTCGCCATGGTGGTAAGCCGTATGCTCACTGCA-GTAGCCCGCCAGCTGTGCCACCTTA 73288 Query 117503 ATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTC 117562 | || ||| || || || ||||| || ||| |||||| ||||| |||| Sbjct 73287 ACCTCGCTCGTTAGCTTGCGTTTCAGGCATGCGAAAAGCACCTTACGCTGCGAGATCTTC 73228 Query 117563 AGACCATCCGCCACGTGAGGG-ATCGAACGCT 117593 || || || |||| ||||| | ||| |||| Sbjct 73227 AGGCCGTCAACCAC-CGAGGGCAGCGATCGCT 73197 Score = 143 bits (158), Expect = 3e-29 Identities = 196/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | ||| || ||||||||||| ||| ||| || || || || | Sbjct 73487 GCGTGAAGATGTAACGAGGGCTAGCGGCATCCTTGCCTCCTTGCAGACGGGTACCGAATT 73428 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || || || | | || |||||||||| |||||||||| ||| |||| || | Sbjct 73427 GACCTGAAGGATACAACAGCGGAAGGTTGTTGGATCCCACGAAATCCTGCGCCATGTTGA 73368 Query 152147 CAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATC 152206 ||||||| ||||| ||||| || ||||| || ||||| ||||| | ||| | Sbjct 73367 CAATCGTCGAGTGCAGTGAAGCTTCGCCATGGTGGTAAGCCGTATGCTCACTGCAGTAGC 73308 Query 152207 CCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266 |||||| ||| |||||||| | || |||| || || || || || ||| ||| || Sbjct 73307 CCGCCAGCTGTGCCACCTTAACCTCGCTCGTTAGCTTGCGTTTCAGGCATGCGAAAAGCA 73248 Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 |||| ||||| || |||| ||||| ||||| Sbjct 73247 CCTTACGCTGCGAGATCTTCAGGCCGTCAACCAC 73214 >seq219 Length=34633 Score = 107 bits (118), Expect = 2e-18 Identities = 236/351 (67%), Gaps = 2/351 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || ||||| || |||| |||||| | || ||| ||| | Sbjct 24817 CCTGTTCCGATACCATCACTGCCGTTCACGAGAACCATCGGGATGATCGGGATGTACCAT 24876 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 || || || | || ||||| || || || |||| || ||||| |||| Sbjct 24877 TCGGGTTCGATAGACTGGCCGTCTTCATCCAAATACTTCAGCACATCGTTGTCCAGCGGA 24936 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCA 152055 ||| | || |||| || | | ||| ||||| || || || | |||||| | | Sbjct 24937 TCGTAGATAAGTCGCGTGAGCTGCTCCAAGTTGGTGAAAATATAACGAGCGCTGGCAGAA 24996 Query 152056 TCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCC-AGAGGGCTCGAGGAGGTTGAGGTT 152114 |||||||| || ||| ||||| || ||||| || | ||| | || |||| || ||| Sbjct 24997 TCCTTGCCGCCCATCAGACGCGTACCGAACTGACCGATAGGAGAC-AGAAGGTGGATGTT 25055 Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACC 152174 ||| || ||||||| ||| |||| ||||| || ||| |||| |||| || || Sbjct 25056 GTTACTTCCAACGAAATCCTGCGCCATGTTCACGATACAGCCTTGCAAACTCTGCTCTCC 25115 Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTT 152225 ||| || ||||| | ||||||| | || || ||||||||||||||||| Sbjct 25116 GTGATGGTACGCAGAGTGCTCCGAAACATAGCCAGCCAACTGCGCCACCTT 25166 Score = 104 bits (114), Expect = 3e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||| ||||||| ||| |||| ||||||||| || |||||||||||||| || Sbjct 24970 GTGAAAATATAACGAGCGCTGGCAGAATCCTTGCCGCCCATCAGACGCGTACCGAACTGA 25029 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | || || |||| | |||||| || || || | || |||| ||| || Sbjct 25030 CCGATAGGAGACAGAAGGTGGATGTTGTTACTTCCAACGAAATCCTGCGCCATGTTCACG 25089 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 || ||||| | ||| ||| || || || ||||| | ||||||| || ||||| Sbjct 25090 ATACAGCCTTGCAAACTCTGCTCTCCGTGATGGTACGCAGAGTGCTCCGAAACATAGCCA 25149 Query 117485 GCCAGCTGAGCCACCTTCATGTCTGAC 117511 |||| ||| |||||||| | |||||| Sbjct 25150 GCCAACTGCGCCACCTTAAGCTCTGAC 25176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547184480358400