Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001278165.1_202015-09-02] 4,504 sequences; 41,348,230 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq529 390 1e-103 seq1406 387 2e-102 seq1544 188 9e-43 seq584 125 9e-24 seq1027 123 3e-23 seq114 102 1e-16 seq683 89.7 7e-13 >seq529 Length=16363 Score = 390 bits (432), Expect = 1e-103 Identities = 850/1257 (68%), Gaps = 29/1257 (2%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | ||||| ||| || || | ||| || | | |||||| | || || || Sbjct 4442 TTCTTGGCTGGAACCGTGGTGTTGCGCGGGATCAGCTTGGTCATGACTCCGCCAGCCGTC 4501 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || | || |||||||| || | ||||||||| || |||||||| || ||| || | Sbjct 4502 TCCAAGCCTAGAGACAGCGGCGCCACGTCCAACAGCAACAGGTCCTG--CAGCTTGGACG 4559 Query 7007 CCT-----TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCAT 7061 | | ||| | | |||||| || || || || || ||||| || || || || | Sbjct 4560 ACGAGTCATGACCGCTCAGGATGGCCGCCTGCACTGTAGCACCGTACGCTACGGCTTCGT 4619 Query 7062 CGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGAT-AACATTTGTTGA 7120 | ||||| || | || || | |||||||| ||| | || ||| |||| || || Sbjct 4620 CCGGGTTGATGGACTTGAAGAGCTTCTTACCGTTGAAAAAGTC-GATCAACAACTGCTGC 4678 Query 7121 ATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCG 7180 | |||||||| || ||||| || || || | || | || ||||| | | | | ||| Sbjct 4679 ACCTTCGGGATACGCGTCGAGCCGCCCACTAGCACCACCTCGTTCACCTG-GCTCT-TCG 4736 Query 7181 AT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCA 7238 | ||| |||||||| || | | || || ||||| || || || || || Sbjct 4737 ACAGCTTCGAGTCTCGTAGAACCTGCGCCACTGGGTCCATTGTCTTGCGAAAGAATTCAC 4796 Query 7239 TACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATA 7298 ||| || ||||| || || || || ||||||| | | |||||| || || || | Sbjct 4797 CACAAAGATCCTCGAACCGCGCGCGCGTAATGGTAGAGTTGAAATCGACACCATCCAGCA 4856 Query 7299 ACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 ||| ||||| || ||| | ||| || | | || | || ||||| || ||||| | Sbjct 4857 GCGAGTCAATCTCGATGTACGCTTGCGCAGACATCGACAGTGTACGCTTGGCACGCTCGC 4916 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 ||||||| || | ||| || || || |||| ||| | | ||||| || ||| || | Sbjct 4917 ACGCCGTACGCAGACGCCGCAGCGCGCGCGAGTTCACCGTCATATCCTTGCGATGCTTGC 4976 Query 7419 GTTTAAACTCTT---CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCA 7475 | || || |||| || |||| | ||| | || | ||||| ||||| || |||| Sbjct 4977 GCTTGAATTCTTGCACAAAGAACT--CGACG-AGGCGGTTGTCGAAGTCTTCGCCGCCCA 5033 Query 7476 AGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACG 7535 ||| || || || || ||||| || || || ||||| || ||||||| | | | || Sbjct 5034 GGTGCGTGTCGCCTGCCGTCGCCTTCACCTCGAAGATGCCGTCTTCAATAGTAAGAAGCG 5093 Query 7536 AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGT 7595 | || |||||||| || ||||| ||||| || || || ||||| || | | || Sbjct 5094 AGACGTCAAACGTTCCTCCACCAAGGTCGAAGATCAGCACGTTGTGCTCTCCACCCTT-- 5151 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 ||| || |||||||| || ||||| || || || || || || || ||||| || || Sbjct 5152 -CTTGTCCAGACCGTAGGCAATAGCGGCGGCTGTCGGCTCGTTGATGATACGTAGCACGT 5210 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 ||| |||||||| | |||||||| ||||| ||||| ||||| ||||| ||||||| Sbjct 5211 TCAAACCAGCAATGACACCGGCATCTTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGG 5270 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 |||| ||||| || || |||| | | || | |||||| | || | |||||||| || Sbjct 5271 CCGGCACCGTCACCACTGCGTTCTTCACCTGCTTACCAATGTAAGCCTCCGCGATCTCGC 5330 Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTCTTC-AGCCGCAAACTGTTTCGT-TTCACC 7833 ||| ||| || ||||| || || ||||| || || | ||| || | | ||||| Sbjct 5331 GCATCTTGACCAGCACCATGGACGAGATCTCCTCGGGCTGGAAA--GTCACCTGCTCACC 5388 Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCA 7893 || || | || | | || |||| | | | ||| | || ||| ||| ||| Sbjct 5389 TTTGAACTGCACCACCACTTCCGGCTTATTCTCCGGACCTCGAGCCACTTTAAACGGCCA 5448 Query 7894 ATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGC 7953 | | || || || || | |||| | ||||| | ||||| | |||||| | Sbjct 5449 GTGCCTGATGTCCGACTGCACTTCAGGGTCGGTGAACTTGCGCCCGATCAAACGCTTGAC 5508 Query 7954 ATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAG 8013 |||||| || ||||| | | ||||||||| |||||||| |||||||| |||||||| Sbjct 5509 ATCAAACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCCGCGTCGCCGATAAG 5568 Query 8014 ACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTT 8073 || || | ||||| || || ||||| || || ||||| || || || |||||||| Sbjct 5569 GCGCTC---CGTGTCCGTGAAGGCCACGTAGGACGGTGTCGTGCGGTTGCCCTGGTCGTT 5625 Query 8074 CGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCC 8130 |||||| ||||| ||||||||||| ||||| ||||| |||||||| || || || || Sbjct 5626 CGCAATGATTTCCACGCGGTCGTTCTGCCACACGCCCACGCACGAGTAGGTCGTGCC 5682 >seq1406 Length=6139 Score = 387 bits (428), Expect = 2e-102 Identities = 842/1254 (67%), Gaps = 20/1254 (2%) Strand=Plus/Minus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| ||||| | || | ||||| | || | |||||| || | || || | || || Sbjct 1243 CGTCGAGAACGTCTGCGCCTTCTTGGTAGGCACCGTCGTGTTACGCGCGATCAGCGTCGT 1184 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||| || || || || || |||||||| || ||||||||||| || ||||| Sbjct 1183 CATGACACCGCCTGCCGTCTCCAGGCCCAGAGACAGCGGCGTCACGTCCAACAGCAACAG 1124 Query 6988 GTCTTGAACAGATTCGTTCCCTTCACCCGTT-------AAGATGGCGGCTTGGACCGTCG 7040 ||| || ||| || ||| | |||| | |||||| || || ||||| | Sbjct 1123 GTCCTG--CAGCTTG--TCCGACGAGTCGTTGCCGCCCAGGATGGCCGCCTGTACCGTTG 1068 Query 7041 CCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAAT 7100 | ||||| || || ||||| || ||||| || | || || | || || ||||| || Sbjct 1067 CGCCGTACGCTACGGCCTCGTCCGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGA 1008 Query 7101 AATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTT 7160 | || || | || ||| || | |||||||| || ||||| || || || | || | | Sbjct 1007 ACTCAGACAGCAGTTGCTGCACCTTCGGGATACGCGTCGAGCCGCCCACTAGCACCACCT 948 Query 7161 CATTCACTTTCGAT-TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 | ||||| | | | || | ||| | ||| || | || || || || ||||| Sbjct 947 CGTTCACCTNGGCTCTTGGACAGCTTGGCGTCGCGCAACACCTTCTCCACGGGCTCCATG 888 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 || ||||| |||| ||||| ||||| ||||| || || || |||| | | | Sbjct 887 GTCTTTCGGAAGTAGTCGCCGCACAGGTCCTCGAAACGGGCGCGCGTGATGGTCGAGTTG 828 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || ||||||||||| | ||| || ||||||||| | || |||| ||| || | | Sbjct 827 AAGTCCACGCCGTCGTACAGCGAGTCGATTTCAATGTAGGCCTGGGCCGACGACGACAGC 768 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| |||||||| |||||||| || | ||| || || || || |||| | Sbjct 767 GTCCGCTTGGCGCGCTCGCACGCCGTACGCAGACGCCGCAGCGCGCGTTGGTTCTGTGCC 708 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATC 7458 || || || ||||| || || ||||| | |||| |||| | || | || Sbjct 707 ATGTCCTTGCGGTGTTTGCGCTTGAACTCCTGCACGAAGAACTCGACG-AGGCGGTTGTC 649 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| || || || |||| ||| || || || ||||| || || || || ||||| || | Sbjct 648 GAAGTCCTCGCCGCCCAGGTGCGTGTCGCCAGCGGTGGCCTTCACCTCGAAGATGCCCTC 589 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 |||||| | || ||| ||||| || || || || |||||||| || || || ||||| Sbjct 588 CTCAATGGACAGCAGCGACACATCGAAGGTGCCGCCGCCCAGGTCGAAGATCAGCACGTT 529 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 ||| || | || ||| || || |||||||| ||||| || ||||| || || || Sbjct 528 GCGCTCGCCGCCCTT---CTTGTCCAGGCCGTACGCAATAGCGGCGGCCGTGGGCTCGTT 472 Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 || ||||| || |||||| || || || | | || || || || || || || || Sbjct 471 GATGATACGCAGCACGTTCAGCCCGGCGATGGCACCGGCGTCCTTGGTGGCCTGGCGCTG 412 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 ||| ||||| ||||||||||| ||||| | ||| |||| | |||| | ||| |||| | Sbjct 411 CGAGTCGTTGAAGTAGGCCGGTACCGTGATGACGGCGTTCTTGACCTCCTTGCCGATGAA 352 Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818 | || || | || ||| ||| |||| ||||| || || ||||| || | || Sbjct 351 GGCCTCGGCCACCTCGCGCATCTTGATAAGCACCATGGACGAGATCTCCTCGGGTTGGAA 292 Query 7819 CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGAT 7878 | || | || || || || | || ||| || || || | || || || Sbjct 291 CGTCTTGGACTCGCCCTTGAACTGCACCGTGATCTGCGGCTTGTCGCCGGCGCCCGGCGA 232 Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938 | ||| ||| ||| | || || ||| | || || ||||||| ||||| | || Sbjct 231 CAGCTTGAACGGCCAGTGCTTGATGTCGGCCTGCACGATCGGGTCCGAGAACTTGCGGCC 172 Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998 |||||| ||||| || || || || ||||| | | ||||||||| |||||||| || Sbjct 171 GATAAGGCGCTTGGCGTCGAACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGC 112 Query 7999 CGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCG 8058 || || ||||| || || || | ||||| || || ||||| || || || || || Sbjct 111 GGCATCACCGATCAGGCGCTC---CGTGTCCGTGAAGGCCACGTAGGACGGCGTGGTGCG 55 Query 8059 ATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || |||||||| || || || || ||||||||||| ||||| ||||| || Sbjct 54 GTTGCCCTGGTCGTTGGCGATGATCTCCACGCGGTCGTTCTGCCACACGCCCAC 1 >seq1544 Length=5576 Score = 188 bits (208), Expect = 9e-43 Identities = 430/646 (67%), Gaps = 11/646 (2%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || | |||||| || | || || | || ||||| | ||||| || Sbjct 4934 TTCTTGGTGGGCACCGTCGTGTTACGCGCGATCAGCGTCGTCATGACGCCACCGGCCGTC 4993 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || || || ||||||||||| ||||||||||| || |||||||| || ||| ||| || Sbjct 4994 TCCAGACCCAGAGACAGAGGAGTCACGTCCAACAGCAACAGGTCCTG--CAGCTTC--TC 5049 Query 7007 C-------CTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 | | | || | | |||||| || ||||| || || ||||| || || ||||| Sbjct 5050 CGAAGAGTCGTTGCCACTCAGGATGGCAGCCTGGACGGTGGCACCGTAGGCCACAGCCTC 5109 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 || ||||| || | || || | || || ||||| || | || || | | || || Sbjct 5110 GTCCGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGACAGAAGCTGCTG 5169 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | |||||||| || ||||| |||||||| | || | || | ||| | || Sbjct 5170 CACCTTCGGGATACGCGTCGAGCCACCGACAAGGACAACCTCGTGCACCTGGCTCTTGGA 5229 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || | || || || || ||||| |||||||| |||| Sbjct 5230 CAGCTTGGCGTCGCGCAACACCTTCTCCACGGGCTCCATGGTCTTACGGAAGTAGTCACC 5289 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 |||| ||||| ||||| || || || |||| | | || |||| ||| ||| | | Sbjct 5290 GCACATGTCCTCGAAACGGGCGCGCGTGATGGTCGAGTTAAAGTCAATGCCATCGAACAG 5349 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 || ||||| || ||| | || |||| ||| || | ||| ||||| || ||||| || Sbjct 5350 AGAGTCAATCTCGATGTAGGCCTGGGCCGACGACGAAAGCGTACGCTTAGCACGCTCGCA 5409 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 ||||| || | |||||| ||||||||| |||| | | || || || || || || Sbjct 5410 AGCCGTACGCAGACGACGGAGGGCACGCTGGTTGTCCGTGATGTCCTTGCGGTGCTTGCG 5469 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || ||||| | || |||||| | || | ||||| || |||||||||| ||| Sbjct 5470 CTTGAACTCCTGAGTGAAGTGGTCCACCAGACGGTTGTCGAAGTCCTCACCACCCAGGTG 5529 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || || || ||||| || || || || ||||| || | |||||| Sbjct 5530 CGTGTCGCCAGCGGTGGCCTTCACCTCGAAGATGCCCTCCTCAATG 5575 >seq584 Length=25208 Score = 125 bits (138), Expect = 9e-24 Identities = 450/696 (65%), Gaps = 17/696 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || || |||| ||| || || || ||| || || || || | || Sbjct 9801 TCGAAGTCCTCGCCGCCCAGGTGCGTGTCGCCGTTGGTGGCCAGCACCTCGAACACGCCA 9742 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || ||| | || || ||||| || || ||||||||||||||||| | || ||| Sbjct 9741 CCGTCGATGGCCAGCAGCGTCACATCGAAGGTGCCACCACCCAGGTCAAACACCAGCACG 9682 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | | | ||||| || | ||||| || || || || ||||| || || Sbjct 9681 TTCTTCTCGCCCTGTGCCTTCTTGTCAATGCCGTAGGCAATGGCAGCGGCCGTGGGCTCG 9622 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | || | | || ||||| || || | || || || || || || || Sbjct 9621 TTGATGATGCGCTGCACCG-TGAGTCCAGCGATGGTGCCGGCGTCCTTGGTAGCCTGACG 9563 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| || ||||| ||||| ||||| || | |||| Sbjct 9562 CTGGGCGTCGTTGAAGTAGGCGGGCACCGTCACGACGGCGTCGAATACCTCGCGGCCGAT 9503 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || |||| ||| | ||||| ||||| || ||||| | || | ||| || | ||| Sbjct 9502 GTATCCCTCCGAGATCTGCTTCATCTTGGTGAGCACCATGGCCGAGACCTCCTCGGGCGC 9443 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 |||| | | || || || | ||||| | || | || || ||| | | Sbjct 9442 GAACTCGCGCTTCTCGCCCTTGACCTCAACCTGGATGAAAGGCTT-GCCG--TCCTTGTT 9386 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| | || |||| | ||| | ||| || ||| | ||| |||| | Sbjct 9385 GATGATCTCGTACGGCAGCAGCTTCTTGTCGGACTGCACCGACTTGTCGTTGTACTTGCG 9326 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| || ||||| | || || | || || | ||||| |||| | |||||||| Sbjct 9325 GCCGATGAGGCGCTTGACGTCGAACAGCGTCTTCTCCGGGTTGATGGTGGCCTGGTTCTT 9266 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATT---TTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||||| || || || | || ||| ||||||||||||| || || Sbjct 9265 CGCGCCGTCGCCGATCAGGCGCTCGTCGTTCGAGTCC---CACGCGACGTACGAGGGCGT 9209 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC---GCGGTCGTTTTGCCAGACGCC 8109 | || || || |||||||| || || || || || |||| || | ||| ||| Sbjct 9208 GATACGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTCTGGTCCTTGT---AGATGCC 9152 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 |||||||| || || || || | || || ||||| Sbjct 9151 CACGCACGAGTAGGTCGTGCCCAGGTCGATGCCGAT 9116 >seq1027 Length=11728 Score = 123 bits (136), Expect = 3e-23 Identities = 449/699 (64%), Gaps = 14/699 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| |||| ||| || || || | || | ||||| || ||||| || Sbjct 1953 TCGAAGTCCTCACCGCCCAGGTGCGTGTCACCGCCCGTGGACTTGACCTCGAAGATGCCG 2012 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||| ||||| || ||||| ||||||||||| || ||||| ||| Sbjct 2013 TTCTCGATCGACAGGATCGACACATCGAAGGTACCGCCACCCAGGTCGAAGATGAGCACG 2072 Query 7577 TT------CGTATCGTC---GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 || ||| |||| | | |||| | || || |||||||||| || || ||| Sbjct 2073 TTGCAGGCCGTGCCGTCCGTGCCGGCGTTCGTGTCCAGGCCGTACGCGAGGGCAGCGGCC 2132 Query 7628 GTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 || || || || || ||||| ||| || ||||||||| || | | || || || || Sbjct 2133 GTGGGCTCGTTGATGATACGCTTGAC-GTCCAGGCCAGCGATCGAACCGGCGTCCTTGGT 2191 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 || || || ||| ||||| |||||||| || || || || || || | ||| | Sbjct 2192 CGACTGACGCTGCTGGTCGTTGAAGTAGGCGGGCACGGTGACCACAGCCTGGCTGATGCT 2251 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 || || || | | || || | || ||||| || ||||| || || ||||| Sbjct 2252 CTGGCCCAGGAAGGCCTCGGCCGTCTCCTTCATGCGCAGCAGCACCATGGACGAGATCTC 2311 Query 7807 TTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC 7866 |||| | || ||| | ||||| || || || || || |||| | || || | Sbjct 2312 CTCAGGGGTGAAGCTCTTCTTGTCACCCTTGAACTCCACCTCGATCAGGACCTTGTCGTC 2371 Query 7867 AGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGA 7926 |||| | | | | | | | | || || | | ||| | ||| Sbjct 2372 GTCACCCTCCTTGATCGTGAAGGGGAAGTGCTTGGCGTCCTTCTTCACCACCTCGTCGCT 2431 Query 7927 AAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGT 7986 || | | ||||| | |||||| || || || || ||||| ||| ||| ||| | Sbjct 2432 GAAGCTGCGGCCGATGATACGCTTGGCGTCGAACACCGTGTTGGTGGCGTTACCGGCGGC 2491 Query 7987 TTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGA 8046 ||| |||| || || || ||||| ||||| || | || | || ||||| |||| Sbjct 2492 CTGGATCTTGGCGGCCTCACCGATGAGACGCTC---GCTCTCGTTGAAAGCGACCCACGA 2548 Query 8047 TGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGAC 8106 |||||||| || || || | | ||| || || || || || || ||| | ||| || Sbjct 2549 GGGGGTCGTGCGGTTGCCCTCGCTGTTGGCGATGATCTCCACCTGGCCGTCCTTCCACAC 2608 Query 8107 GCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| |||||||| ||||| || || | ||||| ||||| Sbjct 2609 GCCCACGCACGAGTACGTCGTGCCCAGGTCAATGCCGAT 2647 >seq114 Length=159266 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 184205 ACACTCGCGTCACGCACGTTCTTACATTTACCCCTAAGCGGAAAAACACCGTAATGATCA 184264 ||| |||| |||||||||||| | ||| || | ||| ||||| |||||||| |||||| Sbjct 72575 ACAGTCGCATCACGCACGTTCAGAAGTTTGCCGCGAAGAGGAAACACACCGTACTGATCA 72516 Query 184265 CGACCAACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATA 184324 || ||||| |||| |||||||| | || |||| || ||||||||||| || || | | Sbjct 72515 CGTCCAACCACTGCCAGACCAGCCACGGCCAGTGCCTTGGCAGAATCACCCTCAGTCAAA 72456 Query 184325 ATAAGAGTACACTTAC 184340 || || | |||| || Sbjct 72455 ATCAGCGAGCACTCAC 72440 >seq683 Length=29502 Score = 89.7 bits (98), Expect = 7e-13 Identities = 180/265 (68%), Gaps = 8/265 (3%) Strand=Plus/Minus Query 7534 CGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTT 7593 ||| ||||| || ||||| ||||||||||| || | | | | | | ||||| | || Sbjct 13573 CGACACATCGAAGGTACCGCCACCCAGGTCGAAGACGGCGATGACCTTGCCGTCGGCCTT 13514 Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 || | | ||||| || | || || ||||| || ||||| || ||||| || Sbjct 13513 GTCCATG------CCGTAGGCCAGGGCAGCGGCCGTGGGCTCATTGATGATACGGAGCAC 13460 Query 7654 GTTCAGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 || ||| || || || |||||| | || || || || || || ||||| ||||| |||| Sbjct 13459 GTCCAGACCGGCGATC-TTGCCGGCGTCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGT 13401 Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATAT 7772 ||||||| || || ||||| || | |||| ||| || | | || ||| | | Sbjct 13400 AGGCCGGCACGGTGACGACGGCCTGGGTGATGGGCTTGCCCAAGAAGCCGTCGGCGGTCT 13341 Query 7773 CTTTCATTTTGGTAAGAACCATCGA 7797 | ||||| ||||| || ||||| || Sbjct 13340 CCTTCATCTTGGTGAGCACCATGGA 13316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635097042023360