Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001278165.1_202015-09-02] 4,504 sequences; 41,348,230 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq529 306 5e-78 seq1406 257 2e-63 seq1544 176 6e-39 seq118 145 1e-29 seq268 127 3e-24 seq1166 123 3e-23 seq500 122 1e-22 seq23 122 1e-22 seq584 102 1e-16 >seq529 Length=16363 Score = 306 bits (338), Expect = 5e-78 Identities = 1029/1584 (65%), Gaps = 26/1584 (2%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| || || || || ||||| || || || || || Sbjct 5694 GGCATCGACCTGGGCACGACCTACTCGTGCGTGGGCGTGTGGCAGAACGACCGCGTGGAA 5635 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || || |||| ||||| || ||||| || || || || ||||| ||||| || || | Sbjct 5634 ATCATTGCGAACGACCAGGGCAACCGCACGACACCGTCCTACGTGGCCTTCACGGACACG 5575 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || || | || || || || || || ||| || |||||| | ||| || || Sbjct 5574 GAGCGCCTTATCGGCGACGCGGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTG 5515 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | |||||| | || || |||||||| | || |||| || || || Sbjct 5514 TTTGATGTCAAGCGTTTGATCGGGCGCAAGTTCACCGACCCTGAAGTGCAGTCGGACATC 5455 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 | | ||||| | | | |||| | || ||| || ||||||| | | || || | Sbjct 5454 AGGCACTGGCCGTTTAAAGTGGCTCGAGGTCCGGAGAATAAGCCGGA-AGTGGTGGTGCA 5396 Query 195605 TTTCAC-GGTGAGAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 |||| |||||| || | ||| | ||||| || || ||||| |||||| || | | Sbjct 5395 GTTCAAAGGTGAGCAGGTG-ACTTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGGTCA 5337 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| |||| ||||| ||| ||| ||||| ||||| | ||||| ||||| | Sbjct 5336 AGATGCGCGAGATCGCGGAGGCTTACATTGGTAAGCAGGTGAAGAACGCAGTGGTGACGG 5277 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||||||||| || || || | || ||||| | Sbjct 5276 TGCCGGCCTACTTCAACGACTCGCAGCGACAGGCGACCAAAGATGCCGGTGTCATTGCTG 5217 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 || | ||| || | || ||||| || || ||||| || || ||||| || ||||||| Sbjct 5216 GTTTGAACGTGCTACGTATCATCAACGAGCCGACAGCCGCCGCTATTGCCTACGGTCTGG 5157 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||| |||| | ||| | || || ||||||| || || ||||| || ||||||| Sbjct 5156 ACAAG---AAGGGTGGAGAGCACAACGTGCTGATCTTCGACCTTGGTGGAGGAACGTTTG 5100 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 | ||||| ||||| | |||||||| || || ||||| || ||||| || || || || | Sbjct 5099 ACGTCTCGCTTCTTACTATTGAAGACGGCATCTTCGAGGTGAAGGCGACGGCAGGCGACA 5040 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTC 196021 | || || || || ||||| ||||| || || || || ||||| | || ||| Sbjct 5039 CGCACCTGGGCGGCGAAGACTTCGACAACCGCCTCGTCGAGTTCTTTGT-GCAAGAATTC 4981 Query 196022 CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACT 196081 || ||| || || ||||| | | || | | || || || || || | || Sbjct 4980 AAGCGCAAGCATCGCAAGGATATGACGGTGAACTCGCGCGCGCTGCGGCGTCTGCGTACG 4921 Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141 || || || |||||||| || || || || | || ||| | | |||||||| Sbjct 4920 GCGTGCGAGCGTGCCAAGCGTACACTGTCGATGTCTGCGCAAGCGTACATCGAGATTGAC 4861 Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTA 196201 ||| || | || || | || ||| | | || ||||| || || || || || || | Sbjct 4860 TCGCTGCTGGATGGTGTCGATTTCAACTCTACCATTACGCGCGCGCGGTTCGAGGATCTT 4801 Query 196202 AACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAG 196261 ||| || ||| | ||| ||||| || || | || || || || ||| | ||| Sbjct 4800 TGTGGTGAATTCTTTCGCAAGACAATGGACCCAGTGGCGCAGGTTCTACGAGACTCGAAG 4741 Query 196262 ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAG 196321 || ||| |||| | || | || || ||||| || || || ||||| |||||| Sbjct 4740 CTGTCGAAGAGCCAGGTGAACGAGGTGGTGCTAGTGGGCGGCTCGACGCGTATCCCGAAG 4681 Query 196322 ATTCAACAGATGCT-TTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCC 196380 | || ||| || | || | ||| ||||| ||| | | ||| | |||||||| Sbjct 4680 GTGCAGCAGTTGTTGATCGA-CTTTTTCAACGGTAAGAAGCTCTTCAAGTCCATCAACCC 4622 Query 196381 GGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA 196440 ||| ||||| || || || ||||| | || ||||| || || || ||| |||| Sbjct 4621 GGACGAAGCCGTAGCGTACGGTGCTACAGTGCAGGCGGCCATCCTGAGCGGTCATGAC-- 4564 Query 196441 TAATAACGTCCAA-------GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 | | ||||||| || || |||| | || || || || | || || || Sbjct 4563 TCGT--CGTCCAAGCTGCAGGACCTGTTGCTGTTGGACGTGGCGCCGCTGTCTCTAGGCT 4506 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 | || || || || || || ||||| || | || | ||||| || |||| | | Sbjct 4505 TGGAGACGGCTGGCGGAGTCATGACCAAGCTGATCCCGCGCAACACCACGGTTCCAGCCA 4446 Query 196554 AGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| | |||| || || ||||| | || || || | ||||| || ||||| Sbjct 4445 AGAAGGCGC-AGTCGTTCTCGACGTACGCGGACAACCAGTCCGGTGTCTTGATCCAAGTG 4387 Query 196613 TATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGAC 196671 | || || || || || | || || ||| | || || || ||| || ||| Sbjct 4386 TTCGAGGGTGAGCGTTCGATGACCTGTGACAATCATATTCTGGGCAAGTTTAACTTGGAC 4327 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || || || | || | ||||| || || ||| | || ||||| | || | Sbjct 4326 -GGCATCCCGCCCATGCCTCGCGGTGTCCCGCAAATTGACGTGACGTTCGACGTGGATGT 4268 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || ||| | ||||| | || | ||| ||| | | ||||| | ||||| Sbjct 4267 CAACGGCATTTTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCAC 4208 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || || || |||||||| ||| | ||| || || || || || |||||| | || || Sbjct 4207 CATCACGAACGACAAGGGCCGGTTATCTCAGTCCGAGATCGACCGCATGGTTGATGACGC 4148 Query 196852 GGAAAAGTACAGGGAAGAAGACGA 196875 || ||||||| ||| |||| || Sbjct 4147 TGAGAAGTACAAGGACCAAGATGA 4124 >seq1406 Length=6139 Score = 257 bits (284), Expect = 2e-63 Identities = 991/1549 (64%), Gaps = 11/1549 (1%) Strand=Plus/Plus Query 195335 GTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACA 195394 || || || ||||| || || || || ||||| ||| | || ||||| || ||||| || Sbjct 1 GTGGGCGTGTGGCAGAACGACCGCGTGGAGATCATCGCCAACGACCAGGGCAACCGCACC 60 Query 195395 ACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAAT 195454 || || || ||||| ||||| || || | || || || | || |||||||| || || Sbjct 61 ACGCCGTCCTACGTGGCCTTCACGGACACGGAGCGCCTGATCGGTGATGCCGCCAAGAAC 120 Query 195455 CAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAG 195514 ||| || |||||| | ||| || || || ||||| ||||| ||||| || |||||| Sbjct 121 CAGGTGGCCATGAACGCGCACAACACGGTGTTCGACGCCAAGCGCCTTATCGGCCGCAAG 180 Query 195515 TTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGT 195574 || ||||| || || || | ||| || ||| ||||| | | | ||| ||| |||| Sbjct 181 TTCTCGGACCCGATCGTGCAGGCCGACATCAAGCACTGGCCGT-TCAAGCTGTCGCCGGG 239 Query 195575 -GTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCC 195633 | | || ||||| ||| | || | || | || ||| || || || Sbjct 240 CGCCGGCGACAAGCCGCAGATCACGGTGCAGTTCAAGGGCGAGTCCAAGACGTTCCAACC 299 Query 195634 CGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGG 195693 ||| || || ||||| |||||| | || |||||| ||| || || | ||||| || Sbjct 300 CGAGGAGATCTCGTCCATGGTGCTTATCAAGATGCGCGAGGTGGCCGAGGCCTTCATCGG 359 Query 195694 TAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACA 195753 || || || | || || | || ||||| || ||||||| || || || || || Sbjct 360 CAAGGAGGTCAAGAACGCCGTCATCACGGTACCGGCCTACTTCAACGACTCGCAGCGCCA 419 Query 195754 GGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACC 195813 ||| || |||||||| | ||| || || || || ||| || | || ||||| || || Sbjct 420 GGCCACCAAGGACGCCGGTGCCATCGCCGGGCTGAACGTGCTGCGTATCATCAACGAGCC 479 Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 || || || || ||||| || || ||||||||| |||| || || || || | Sbjct 480 CACGGCCGCCGCTATTGCGTACGGCCTGGACAAG---AAGGGCGGCGAGCGCAACGTGCT 536 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 |||||| || || || || || || || ||||| || || || ||||| | || || Sbjct 537 GATCTTCGACCTGGGCGGCGGCACCTTCGATGTGTCGCTGCTGTCCATTGAGGAGGGCAT 596 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACG 195993 ||||| || ||||| || ||||| || || || || || || || || ||||| || Sbjct 597 CTTCGAGGTGAAGGCCACCGCTGGCGACACGCACCTGGGCGGCGAGGACTTCGACAACCG 656 Query 195994 TCTTCTC-CGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAA 196052 || || || || || | |||||| || || | || || || | | Sbjct 657 CCTCGTCGAGTTCTTCGT-GCAGGAGTTCAAGCGCAAACACCGCAAGGACATGGCACAGA 715 Query 196053 ATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTT 196112 | | | || || || || || | || || || || || ||||| || || || || | Sbjct 716 ACCAACGCGCGCTGCGGCGTCTGCGTACGGCGTGCGAGCGCGCCAAGCGGACGCTGTCGT 775 Query 196113 CTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAA 196172 | |||| || | |||| || || ||| ||| ||||| | |||||| | | | Sbjct 776 CGTCGGCCCAGGCCTACATTGAAATCGACTCGCTGTACGACGGCGTGGACTTCAACTCGA 835 Query 196173 CTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAAC 196232 | || || || || ||||| || || | | || | || | ||| ||||| | Sbjct 836 CCATCACGCGCGCCCGTTTCGAGGACCTGTGCGGCGACTACTTCCGAAAGACCATGGAGC 895 Query 196233 CTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAG-TCTAAGGTTGATGAAATTGTC 196291 | || || | || | || ||||| ||| || ||| | |||| | || | || Sbjct 896 CCGTGGAGAAGGTGTTGCGCGACGCCAAGCTGTCCAAGAGCCNAGGTGAACGAGGTGGTG 955 Query 196292 CTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAAT 196351 || ||||| || || || ||||| |||||| | || || |||| ||| |||||||| Sbjct 956 CTAGTGGGCGGCTCGACGCGTATCCCGAAGGTGCAGCAACTGCTGTCTGAGTTCTTCAAC 1015 Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTT 196411 || || ||||| | ||||||||||| || || || || || || || | || Sbjct 1016 GGCAAGGAGCCCAACAAGTCCATCAACCCGGACGAGGCCGTAGCGTACGGCGCAACGGTA 1075 Query 196412 CAGGCTGCTATTCTCTCAGGTGTTGAC---AATAATAACGTCCAAGATCTTCTGCTACTT 196468 ||||| || || || || ||| | || | || || || |||| | Sbjct 1076 CAGGCGGCCATCCTGGGCGGCAACGACTCGTCGGACAAGCTGCAGGACCTGTTGCTGTTG 1135 Query 196469 GATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATT 196528 || || | || | || ||||| || || || || || ||||| ||||| | | || Sbjct 1136 GACGTGACGCCGCTGTCTCTGGGCCTGGAGACGGCAGGCGGTGTCATGACGACGCTGATC 1195 Query 196529 GATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAAT 196588 | | ||||| || | || || ||||||| || || || ||||| | || || Sbjct 1196 GCGCGTAACACGACGGTGCCTACCAAGAAGGCGCAGACGTTCTCGACGTACGCGGACAAC 1255 Query 196589 CAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCAT 196648 ||||| ||||| | || || || | || || || ||||| | || || ||| Sbjct 1256 CAACCTGGTGTGCTCATCCAGGTGTTCGAGGGCGAGCGCTCGATGACCCGTGACAATCAT 1315 Query 196649 CTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATT 196708 || || || | ||| | || | || || | || | |||||||| |||||| Sbjct 1316 CTTCTGGGCAAGTTCAACCTGGACGCCATCCCGCCCATGCCTCGTGGTGTTCCCCAGATT 1375 Query 196709 AATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCT 196768 |||| ||||| || ||||| || || || || ||||| | || | ||| ||| | Sbjct 1376 GATGTGACGTTCGACATCGACGCGAACGGGATCCTGAACGTGTCGGCCGTGGAGAAGTCG 1435 Query 196769 TCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAA 196828 | ||||| | ||||| || || || |||||||| || || || || || Sbjct 1436 ACGGGCAAGGAGAACAAGATCACCATCACGAACGACAAGGGCCGACTGTCGCAGTCCGAT 1495 Query 196829 ATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 || || || ||||| || || || ||||||| | || ||||||| Sbjct 1496 ATCGACCGCATGGTGGCGGAGGCCGAGAAGTACAAGTCGGAGGACGAGG 1544 >seq1544 Length=5576 Score = 176 bits (194), Expect = 6e-39 Identities = 616/961 (64%), Gaps = 3/961 (0%) Strand=Plus/Minus Query 195920 ATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAA 195979 ||||| | || || ||||| || ||||| || ||||| || || || || |||||||| Sbjct 5574 ATTGAGGAGGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACACGCACCTGGGTGGTGAG 5515 Query 195980 GATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAA 196039 || ||||| ||||| | || || || | |||||| || ||| | || Sbjct 5514 GACTTCGACAACCGTCTGGTGGACCACTTCACTCAGGAGTTCAAGCGCAAGCACCGCAAG 5455 Query 196040 GATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA 196099 || || | | || | | || || ||||| || | || || || || ||||| || Sbjct 5454 GACATCACGGACAACCAGCGTGCCCTCCGTCGTCTGCGTACGGCTTGCGAGCGTGCTAAG 5395 Query 196100 CGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATT 196159 || || || || || |||| || | | |||||||| || |||| || || ||| Sbjct 5394 CGTACGCTTTCGTCGTCGGCCCAGGCCTACATCGAGATTGACTCTCTGTTCGATGGCATT 5335 Query 196160 GACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGG 196219 ||||| | | || || || || || ||||| || || | | ||| | || | Sbjct 5334 GACTTTAACTCGACCATCACGCGCGCCCGTTTCGAGGACATGTGCGGTGACTACTTCCGT 5275 Query 196220 AAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTT 196279 ||| ||||| || || || | || | || ||||| ||| || ||| |||| Sbjct 5274 AAGACCATGGAGCCCGTGGAGAAGGTGTTGCGCGACGCCAAGCTGTCCAAGAGCCAGGTG 5215 Query 196280 GATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCT 196339 | || |||||||||| || || || || ||||| |||||| | || ||| | || || Sbjct 5214 CACGAGGTTGTCCTTGTCGGTGGCTCGACGCGTATCCCGAAGGTGCAGCAGCTTCTGTCC 5155 Query 196340 AGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTAT 196399 ||||||||| || || ||||| | ||||||||||| || || || || || Sbjct 5154 GACTTCTTCAACGGCAAGGAGCCCAACAAGTCCATCAACCCGGACGAGGCTGTGGCCTAC 5095 Query 196400 GGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT---AATAACGTCCAAGAT 196456 ||||| |||| |||||||| || || || ||| | | || | || || Sbjct 5094 GGTGCCACCGTCCAGGCTGCCATCCTGAGTGGCAACGACTCTTCGGAGAAGCTGCAGGAC 5035 Query 196457 CTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATG 196516 || |||| | || || | || | || |||||||| || || || ||||| || ||| Sbjct 5034 CTGTTGCTGTTGGACGTGACTCCTCTGTCTCTGGGTCTGGAGACGGCCGGTGGCGTCATG 4975 Query 196517 ACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACG 196576 || | | || | | ||||| || | || || |||||| || || || ||| Sbjct 4974 ACGACGCTGATCGCGCGTAACACGACGGTGCCCACCAAGAAGTCGCAGACGTTCTCGACG 4915 Query 196577 TATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCA 196636 || | || || ||||| ||||| | ||||| || | || || || ||||| | Sbjct 4914 TACGCGGACAACCAACCTGGTGTGCTCATTCAGGTGTTCGAGGGCGAGCGCTCGATGACC 4855 Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 || ||| | || || || | ||| | || || || || | || | ||| Sbjct 4854 CGTGACAACAACCTGCTGGGCAAGTTCAACCTGGACGGCATCCCGCCCATGCCTCGTGGT 4795 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 ||||| |||||| |||| ||||| || ||||| || ||||| || ||||| | ||| Sbjct 4794 GTTCCCCAGATTGATGTGACGTTCGACATCGACGCGAACGGAATCCTGAACGTGTCGGCT 4735 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 | || ||| | | ||||| | ||||| || || || |||||||| || || Sbjct 4734 GTTGAGAAGTCGACGGGCAAGGAGAACAAGATCACTATCACGAACGACAAGGGTCGTCTG 4675 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 || ||| || ||||| || |||||| || || || ||||||| | || |||||| Sbjct 4674 TCCCAGGCTGACATTGACCGCATGGTTTCCGAGGCCGAGAAGTACAAGTCGGAGGACGAG 4615 Query 196877 G 196877 | Sbjct 4614 G 4614 >seq118 Length=44280 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || | || || || || |||||| | || || ||| |||| Sbjct 11674 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 11615 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 11614 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 11555 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 11554 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 11495 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||||||||| || ||||| || || | || || || ||| Sbjct 11494 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGT 11447 Score = 143 bits (158), Expect = 4e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || | || || || || |||||| | || || ||| |||| Sbjct 11902 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 11843 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 11842 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 11783 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 11782 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 11723 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||||||||| || ||||| || || Sbjct 11722 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCT 11691 >seq268 Length=47326 Score = 127 bits (140), Expect = 3e-24 Identities = 389/586 (66%), Gaps = 19/586 (3%) Strand=Plus/Plus Query 77933 GGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGA 77992 |||||| || ||||| || || | | ||||||| || | | |||||||| Sbjct 21089 GGAAAGGTCGTGGAGCGCCCCCAGCAGATGATCATGCGCGTGGCGCTGGGTATTCACAAG 21148 Query 77993 AATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCA 78051 | || || | |||| ||| | |||||||| ||||| || || | |||| || Sbjct 21149 CAAGACATCCAGGCGGCACTGCACACGTATGAGCTCATGTCACAGATGT-TCTTTACGCA 21207 Query 78052 CGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCT 78111 ||| || || || | ||||| || || || || ||||| ||| |||| || |||||||| Sbjct 21208 CGCGACGCCCACGCTCTTTAACGCCGGCACGCCGCGTCCGCAGCTGTCGTCGTGTTTCCT 21267 Query 78112 ACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCA 78171 || || | |||| ||||| ||| | || || |||| || |||| |||| || Sbjct 21268 GCTGGCCATGCAGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGCAGTGCGCGTG 21327 Query 78172 GATTTCTAAGTGGGCTGGTGGTATAGGTCTTCA-TATTCACGATGTTCGTGCAAACAAGT 78230 || || |||||||| || ||||| || | ||| ||| ||| | | || || | || Sbjct 21328 CATCTCCAAGTGGGCCGGAGGTATTGG-CATCAGTATGCACAACATCCGCGCCACGAACA 21386 Query 78231 CCAGGATTAGAGGAACTAATGG-TCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTC 78289 | || | || || || || ||| || | || || || || ||||| ||||| ||| Sbjct 21387 GCTACATCCGCGGCACGAACGGATCA-TCCAACGGGATCATCCCCATGCTGAGGGTCTTC 21445 Query 78290 AATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGGGGTCATTCGCTATG 78346 |||| || || |||||||| |||| | || | | | || || || ||||| || Sbjct 21446 AATGACACGGCCCGCTATGTGGACCAGGGAGGAGGCAAGCGCAAAGGCTCGTTCGCCATC 21505 Query 78347 TACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGT 78406 ||||| || || ||||||||||| || | || || |||| || || ||||| || Sbjct 21506 TACCTGGAGCCGTGGCACGCCGACGTGTTCGAGTTCCTGGAGCTGCGCAAGAACCACGGC 21565 Query 78407 GACGAG--GAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTA 78464 ||||| | | | || || | || | ||| ||| ||||| | || ||||| || | Sbjct 21566 AACGAGCTGCACCGCG-CGC-GCGACCTCTTCTACGCTCTGTGGGTCCCCGATCTGTTCA 21623 Query 78465 TGAAGAGAGTTGAGGAAG-GA--GGTAAATGGTCTCTTTTCTGTCC 78507 ||||| | || ||||| || || || ||| |||||||| || Sbjct 21624 TGAAGCG---TGTGGAAGCGAACGGCAAGTGGAGCCTTTTCTGCCC 21666 >seq1166 Length=7542 Score = 123 bits (136), Expect = 3e-23 Identities = 209/299 (70%), Gaps = 13/299 (4%) Strand=Plus/Plus Query 198659 TTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGC 198718 ||||||||| |||||||||||||| ||| | ||| || || || || || || | || Sbjct 2993 TTTCATCGAAATGTTCGTTGGTGTGGGTCCCTCGCGTGTACGTGACCTGTTCAAGGAGGC 3052 Query 198719 ACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTG-----GTAAG 198773 || | || ||||| || | ||||| ||||| ||||| ||||| | | | | Sbjct 3053 TCGCGCGAACGCTCCATGCATTGTGTTCATCGATGAAATTGATGCTGTGGCCCGTGCACG 3112 Query 198774 AAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTT 198833 |||| || | |||| || | | || ||||| |||||||| | ||| | |||||||| Sbjct 3113 AAGCAAGG-GCAACTTCTCCGGC-GGCAATGACGAGCGTGAAAACACGCTCAACCAGCTG 3170 Query 198834 CTCACTGAGATGGATGGTTTTGAC---AATGAGACTGGTATCGTGGTGATTGCTGCTACA 198890 || |||||||||||||| || | |||| ||| | |||||| |||||| ||| Sbjct 3171 CTGGTGGAGATGGATGGTTTCAACTCGAGTGAG---GGTGTGGTGGTGCTTGCTGGTACG 3227 Query 198891 AATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCGTAAGAT 198949 || | ||||| || || | || | || |||||||||||||||||||| |||| Sbjct 3228 AACCGCGCCGATATACTTGACAAGGCCATCCTGCGTCCCGGTCGATTCGACCGGCAGAT 3286 >seq500 Length=16590 Score = 122 bits (134), Expect = 1e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 13024 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 12965 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || |||||||||||||| || || ||| Sbjct 12964 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCAG 12905 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | ||||||||| Sbjct 12904 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGATTACAAC 12845 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 12844 ATCCAGAAGG 12835 >seq23 Length=76221 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || |||||||| || || || ||| | || Sbjct 19976 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACTATCACGCTGGACGTGGAGCCTTCG 19917 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 19916 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 19857 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 19856 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 19797 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | || || ||||| Sbjct 19796 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 19750 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 19748 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 19689 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 19688 GACTCTATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 19629 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 19628 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 19569 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | ||||| || || Sbjct 19568 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTTCGCGGCGG 19522 >seq584 Length=25208 Score = 102 bits (112), Expect = 1e-16 Identities = 384/594 (65%), Gaps = 20/594 (3%) Strand=Plus/Plus Query 196268 AAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAA 196327 ||||| |||| || || ||||| || ||||| || || |||||||| || ||| | || Sbjct 10082 AAGTCGGAGGTGGACGAGATTGTGCTGGTGGGCGGTTCGACCCGTATCCCCAAGGTGCAG 10141 Query 196328 CAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTTAAACAAAACGA----TCAACCCG 196381 ||| || | | || || |||||| ||||| | || | ||||| Sbjct 10142 CAGCTGAT--CAAGGACTACTTCAACGGCAAAGAGC----CCTCGCGCGGTGTGAACCCC 10195 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT 196441 || || || ||||| || ||||| || || |||| | ||| || |||| || | Sbjct 10196 GACGAGGCTGTTGCCTACGGTGCTGCTGTGCAGGGCGGTATCCTG---GGTGGCGAGCAG 10252 Query 196442 AATAACGT--CCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | || | ||||| | | || || | ||||| | || | |||| |||| |||| Sbjct 10253 GACGACCTGACCAAGGACGTGCTTCTGATCGATGTGGTGCCTCTGTCCCAGGGTATTGAG 10312 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || | |||||| || ||||| || | ||| | | ||||| || ||||| |||||| Sbjct 10313 ACTGTGGGTGGCGTCATGACCAAGCTCATTAACCGCAACACTGTGATCCCGACCAAGAAG 10372 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 || ||| || || || || || || || | ||| | ||| || || | || Sbjct 10373 TCGCAGACCTTCTCGACCTACCAGGACAACCAGCCCGCTGTGCTTATCCAGGTGTTCGAG 10432 Query 196619 GGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || || || | || || | ||||| |||| ||| || || | ||||| | || || | Sbjct 10433 GGCGAGCG-TGCCATGACCAAGGACAACCGTCTTCTGGGCAAGTTCGAGCTCACTGGCCT 10491 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 || | || || | ||||| || |||||| | || ||||| || ||||| || || Sbjct 10492 GCCGCCCGCCCCGCGTGGTGTGCCCCAGATTGAGGTGACGTTCGAGATTGACGCCAACGG 10551 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 || || | || | ||||||||||||| | ||||| | || | ||| ||| || Sbjct 10552 TATCCTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCACGATCAC 10611 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| || || || ||||||| || || || ||||| || || || Sbjct 10612 TGCCGAGAAGGGCCGTCTGTCGCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 10665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657825362346880