Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001278165.1_202015-09-02] 4,504 sequences; 41,348,230 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq200 100 3e-16 >seq200 Length=44161 Score = 100 bits (110), Expect = 3e-16 Identities = 124/165 (75%), Gaps = 5/165 (3%) Strand=Plus/Plus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 ||||||||||||||||| | |||| |||||||| || ||||| |||||| | | |||| Sbjct 17030 GCGTGGAACCCTGCTGATCTGAACGAGATGGCACTGCCACCGTGCCACATGTTCTGCCAA 17089 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGAC-TG 142688 ||| |||| | || | | || |||| || ||| |||| ||||| ||||| ||| || Sbjct 17090 TTCTACGTGG--CGGACGGGGAGT-TGTCGTGTCAGATGTACCAGCGCTCGGCCGACATG 17146 Query 142689 GTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCAC 142733 | | || || || ||||| |||||||| |||||||| || || Sbjct 17147 GGT-CTTGGTGTGCCGTTTAACATTGCAAGCTACGCGCTGCTTAC 17190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500471021895040