Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001278215.1_202015-09-02] 4,406 sequences; 41,821,552 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq120 107 2e-18 >seq120 Length=42936 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 20276 TAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGA 20335 ||||| ||||||||||| || || || | ||||||||| |||| | ||| |||| |||| Sbjct 17487 TAGCTTGCAATGTTAAACGGCACACCAAGACCCATGTCGGCCGAGCGCTGGTACATCTGA 17428 Query 20336 CAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCC 20395 || || | ||| ||||| || || || ||||| || |||| ||| || || || || ||| Sbjct 17427 CACGACAACTCCCCGTCCGCCACGTAGAATTGGCAGAACATGTGGCACGGTGGCAGTGCC 17368 Query 20396 ATCAACGACAAGTCCGCCGGGTTCCACGCACACA 20429 ||| || || || |||||||||||| ||| Sbjct 17367 ATCTCGTTCAGATCAGCAGGGTTCCACGCAGACA 17334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441348491393040