Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001278215.1_202015-09-02] 4,406 sequences; 41,821,552 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq495 306 5e-78 seq4257 251 9e-62 seq1535 181 1e-40 seq288 145 1e-29 seq290 127 3e-24 seq220 123 3e-23 seq985 122 1e-22 seq44 116 5e-21 seq459 102 1e-16 >seq495 Length=26289 Score = 306 bits (338), Expect = 5e-78 Identities = 1029/1584 (65%), Gaps = 26/1584 (2%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| || || || || ||||| || || || || || Sbjct 5695 GGCATCGACCTGGGCACGACCTACTCGTGCGTGGGCGTGTGGCAGAACGACCGCGTGGAA 5636 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || || |||| ||||| || ||||| || || || || ||||| ||||| || || | Sbjct 5635 ATCATTGCGAACGACCAGGGCAACCGCACGACACCGTCCTACGTGGCCTTCACGGACACG 5576 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || || | || || || || || || ||| || |||||| | ||| || || Sbjct 5575 GAGCGCCTTATCGGCGACGCGGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTG 5516 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | |||||| | || || |||||||| | || |||| || || || Sbjct 5515 TTTGATGTCAAGCGTTTGATCGGGCGCAAGTTCACCGACCCTGAAGTGCAGTCGGACATC 5456 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 | | ||||| | | | |||| | || ||| || ||||||| | | || || | Sbjct 5455 AGGCACTGGCCGTTTAAAGTGGCTCGAGGTCCGGAGAATAAGCCGGA-AGTGGTGGTGCA 5397 Query 195605 TTTCAC-GGTGAGAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 |||| |||||| || | ||| | ||||| || || ||||| |||||| || | | Sbjct 5396 GTTCAAAGGTGAGCAGGTG-ACTTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGGTCA 5338 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| |||| ||||| ||| ||| ||||| ||||| | ||||| ||||| | Sbjct 5337 AGATGCGCGAGATCGCGGAGGCTTACATTGGTAAGCAGGTGAAGAACGCAGTGGTGACGG 5278 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||||||||| || || || | || ||||| | Sbjct 5277 TGCCGGCCTACTTCAACGACTCGCAGCGACAGGCGACCAAAGATGCCGGTGTCATTGCTG 5218 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 || | ||| || | || ||||| || || ||||| || || ||||| || ||||||| Sbjct 5217 GTTTGAACGTGCTACGTATCATCAACGAGCCGACAGCCGCCGCTATTGCCTACGGTCTGG 5158 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||| |||| | ||| | || || ||||||| || || ||||| || ||||||| Sbjct 5157 ACAAG---AAGGGTGGAGAGCACAACGTGCTGATCTTCGACCTTGGTGGAGGAACGTTTG 5101 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 | ||||| ||||| | |||||||| || || ||||| || ||||| || || || || | Sbjct 5100 ACGTCTCGCTTCTTACTATTGAAGACGGCATCTTCGAGGTGAAGGCGACGGCAGGCGACA 5041 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTC 196021 | || || || || ||||| ||||| || || || || ||||| | || ||| Sbjct 5040 CGCACCTGGGCGGCGAAGACTTCGACAACCGCCTCGTCGAGTTCTTTGT-GCAAGAATTC 4982 Query 196022 CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACT 196081 || ||| || || ||||| | | || | | || || || || || | || Sbjct 4981 AAGCGCAAGCATCGCAAGGATATGACGGTGAACTCGCGCGCGCTGCGGCGTCTGCGTACG 4922 Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141 || || || |||||||| || || || || | || ||| | | |||||||| Sbjct 4921 GCGTGCGAGCGTGCCAAGCGTACACTGTCGATGTCTGCGCAAGCGTACATCGAGATTGAC 4862 Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTA 196201 ||| || | || || | || ||| | | || ||||| || || || || || || | Sbjct 4861 TCGCTGCTGGATGGTGTCGATTTCAACTCTACCATTACGCGCGCGCGGTTCGAGGATCTT 4802 Query 196202 AACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAG 196261 ||| || ||| | ||| ||||| || || | || || || || ||| | ||| Sbjct 4801 TGTGGTGAATTCTTTCGCAAGACAATGGACCCAGTGGCGCAGGTTCTACGAGACTCGAAG 4742 Query 196262 ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAG 196321 || ||| |||| | || | || || ||||| || || || ||||| |||||| Sbjct 4741 CTGTCGAAGAGCCAGGTGAACGAGGTGGTGCTAGTGGGCGGCTCGACGCGTATCCCGAAG 4682 Query 196322 ATTCAACAGATGCT-TTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCC 196380 | || ||| || | || | ||| ||||| ||| | | ||| | |||||||| Sbjct 4681 GTGCAGCAGTTGTTGATCGA-CTTTTTCAACGGTAAGAAGCTCTTCAAGTCCATCAACCC 4623 Query 196381 GGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA 196440 ||| ||||| || || || ||||| | || ||||| || || || ||| |||| Sbjct 4622 GGACGAAGCCGTAGCGTACGGTGCTACAGTGCAGGCGGCCATCCTGAGCGGTCATGAC-- 4565 Query 196441 TAATAACGTCCAA-------GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 | | ||||||| || || |||| | || || || || | || || || Sbjct 4564 TCGT--CGTCCAAGCTGCAGGACCTGTTGCTGTTGGACGTGGCGCCGCTGTCTCTAGGCT 4507 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 | || || || || || || ||||| || | || | ||||| || |||| | | Sbjct 4506 TGGAGACGGCTGGCGGAGTCATGACCAAGCTGATCCCGCGCAACACCACGGTTCCAGCCA 4447 Query 196554 AGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| | |||| || || ||||| | || || || | ||||| || ||||| Sbjct 4446 AGAAGGCGC-AGTCGTTCTCGACGTACGCGGACAACCAGTCCGGTGTCTTGATCCAAGTG 4388 Query 196613 TATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGAC 196671 | || || || || || | || || ||| | || || || ||| || ||| Sbjct 4387 TTCGAGGGTGAGCGTTCGATGACCTGTGACAATCATATTCTGGGCAAGTTTAACTTGGAC 4328 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || || || | || | ||||| || || ||| | || ||||| | || | Sbjct 4327 -GGCATCCCGCCCATGCCTCGCGGTGTCCCGCAAATTGACGTGACGTTCGACGTGGATGT 4269 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || ||| | ||||| | || | ||| ||| | | ||||| | ||||| Sbjct 4268 CAACGGCATTTTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCAC 4209 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || || || |||||||| ||| | ||| || || || || || |||||| | || || Sbjct 4208 CATCACGAACGACAAGGGCCGGTTATCTCAGTCCGAGATCGACCGCATGGTTGATGACGC 4149 Query 196852 GGAAAAGTACAGGGAAGAAGACGA 196875 || ||||||| ||| |||| || Sbjct 4148 TGAGAAGTACAAGGACCAAGATGA 4125 >seq4257 Length=1963 Score = 251 bits (278), Expect = 9e-62 Identities = 859/1331 (65%), Gaps = 11/1331 (1%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| ||||| || || ||||| || || || || ||| Sbjct 1426 GGCATCGACCTCGGCACGACCTACTCGTGTGTGGGCGTGTGGCAGAACGACCGCGTGGAG 1367 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || ||||| || ||||| || || || || ||||| ||||| || || | Sbjct 1366 ATCATCGCCAACGACCAGGGCAACCGCACCACGCCGTCCTACGTGGCCTTCACGGACACG 1307 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || || | || |||||||| || || ||| || |||||| | ||| || || Sbjct 1306 GAGCGCCTGATCGGTGATGCCGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTG 1247 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 || ||||| ||||| ||||| || |||||||| ||||| || || || | ||| || Sbjct 1246 TTCGACGCCAAGCGCCTTATCGGCCGCAAGTTCTCGGACCCGATCGTGCAGGCCGACATC 1187 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGT-GTGGCTGATAAGCCTATGATTAATGTTGA 195603 ||| ||||| | | | ||| ||| |||| | | || ||||| ||| | || | Sbjct 1186 AAGCACTGGCCGT-TCAAGCTGTCGCCGGGCGCCGGCGACAAGCCGCAGATCACGGTGCA 1128 Query 195604 ATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663 || | || ||| || || ||||| || || ||||| |||||| | || || Sbjct 1127 GTTCAAGGGCGAGTCCAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTCATCAA 1068 Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723 |||| ||| || || | ||||| || || || || | || || | || || Sbjct 1067 GATGCGCGAGGTGGCCGAGGCCTTCATCGGCAAGGAGGTCAAGAACGCCGTCATCACGGT 1008 Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783 ||| || ||||||| || || || || ||||| || |||||||| | ||| || || || Sbjct 1007 ACCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGACGCCGGTGCCATCGCCGG 948 Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843 || ||| || | || ||||| || || || || || || ||||| || || ||||| Sbjct 947 GCTGAACGTGCTGCGTATCATCAACGAGCCCACGGCCGCCGCTATTGCGTACGGCCTGGA 888 Query 195844 CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903 |||| |||| || || || || ||||||| || || || || || || || || Sbjct 887 CAAG---AAGGGCGGCGAGCGCAACGTGCTGATCTTCGACCTGGGCGGCGGCACCTTCGA 831 Query 195904 TGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATAC 195963 ||| || || || ||||| | || || ||||| || ||||| || ||||| || || Sbjct 830 TGTGTCGCTGCTGTCCATTGAGGAGGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACAC 771 Query 195964 TCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTCC 196022 || || || || || || ||||| || || || || || || | |||||| Sbjct 770 GCACCTGGGCGGCGAGGACTTCGACAACCGCCTCGTCGAGTTCTTCGT-GCAGGAGTTCA 712 Query 196023 GTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTG 196082 || || | || || || | || | | || || || || || | || | Sbjct 711 AGCGCAAACACCGCAAGGACATGGCACAGAACCAACGCGCGCTGCGGCGTCTGCGTACGG 652 Query 196083 CATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATT 196142 | || || || ||||| || || || || || |||| || | |||| || || | Sbjct 651 CGTGCGAGCGCGCCAAGCGGACGCTGTCGTCGTCGGCCCAGGCCTACATTGAAATCGACT 592 Query 196143 CGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAA 196202 || ||| ||||| | |||||| | | || || || || || ||||| || || | Sbjct 591 CGCTGTACGACGGCGTGGACTTCAACTCGACCATCACGCGCGCCCGTTTCGAGGACCTGT 532 Query 196203 ACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGA 196262 | || | || | ||| ||||| || || || | || | || ||||| ||| Sbjct 531 GCGGCGACTACTTCCGAAAGACCATGGAGCCCGTGGAGAAGGTGTTGCGCGACGCCAAGC 472 Query 196263 TGGATAAG-TCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAG 196321 || ||| | |||| | || | || || ||||| || || || ||||| |||||| Sbjct 471 TGTCCAAGAGCCNAGGTGAACGAGGTGGTGCTAGTGGGCGGCTCGACGCGTATCCCGAAG 412 Query 196322 ATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCG 196381 | || || |||| ||| |||||||| || || ||||| | ||||||||| Sbjct 411 GTGCAGCAACTGCTGTCTGAGTTCTTCAACGGCAAGGAGCCCAACAAGTCCATCAACCCG 352 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC--- 196438 || || || || || || || || | || ||||| || || || || ||| Sbjct 351 GACGAGGCCGTAGCGTACGGCGCAACGGTACAGGCGGCCATCCTGGGCGGCAACGACTCG 292 Query 196439 AATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | || | || || || |||| | || || | || | || ||||| || || Sbjct 291 TCGGACAAGCTGCAGGACCTGTTGCTGTTGGACGTGACGCCGCTGTCTCTGGGCCTGGAG 232 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || || || ||||| ||||| | | || | | ||||| || | || || |||||| Sbjct 231 ACGGCAGGCGGTGTCATGACGACGCTGATCGCGCGTAACACGACGGTGCCTACCAAGAAG 172 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 | || || || ||||| | || || ||||| ||||| | || || || | || Sbjct 171 GCGCAGACGTTCTCGACGTACGCGGACAACCAACCTGGTGTGCTCATCCAGGTGTTCGAG 112 Query 196619 GGAGAACGCTC 196629 || || ||||| Sbjct 111 GGCGAGCGCTC 101 >seq1535 Length=5576 Score = 181 bits (200), Expect = 1e-40 Identities = 617/961 (64%), Gaps = 3/961 (0%) Strand=Plus/Minus Query 195920 ATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAA 195979 ||||| | || || ||||| || ||||| || ||||| || || || || |||||||| Sbjct 5574 ATTGAGGAGGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACACGCACCTGGGTGGTGAG 5515 Query 195980 GATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAA 196039 || ||||| ||||| | || || || | |||||| || ||| | || Sbjct 5514 GACTTCGACAACCGTCTGGTGGACCACTTCACTCAGGAGTTCAAGCGCAAGCACCGCAAG 5455 Query 196040 GATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA 196099 || || | | || | | || || ||||| || | || || || || ||||| || Sbjct 5454 GACATCACGGACAACCAGCGTGCCCTCCGTCGTCTGCGTACGGCTTGCGAGCGTGCTAAG 5395 Query 196100 CGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATT 196159 || || || || || |||| || | | |||||||| || |||| || || ||| Sbjct 5394 CGTACGCTTTCGTCGTCGGCCCAGGCCTACATCGAGATTGACTCTCTGTTCGATGGCATT 5335 Query 196160 GACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGG 196219 ||||| | | || || || || || ||||| || || | | ||| | || | Sbjct 5334 GACTTTAACTCGACCATCACGCGCGCCCGTTTCGAGGACATGTGCGGTGACTACTTCCGT 5275 Query 196220 AAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTT 196279 ||| ||||| || || || | || | || ||||| ||| || ||| |||| Sbjct 5274 AAGACCATGGAGCCCGTGGAGAAGGTGTTGCGCGACGCCAAGCTGTCCAAGAGCCAGGTG 5215 Query 196280 GATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCT 196339 | || |||||||||| || || || || ||||| |||||| | || ||| | || || Sbjct 5214 CACGAGGTTGTCCTTGTCGGTGGCTCGACGCGTATCCCGAAGGTGCAGCAGCTTCTGTCC 5155 Query 196340 AGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTAT 196399 ||||||||| || || ||||| | ||||||||||| || || || || || Sbjct 5154 GACTTCTTCAACGGCAAGGAGCCCAACAAGTCCATCAACCCGGACGAGGCTGTGGCCTAC 5095 Query 196400 GGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT---AATAACGTCCAAGAT 196456 ||||| |||| |||||||| || || || ||| | | || | || || Sbjct 5094 GGTGCCACCGTCCAGGCTGCCATCCTGAGTGGCAACGACTCTTCGGAGAAGCTGCAGGAC 5035 Query 196457 CTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATG 196516 || |||| | || || | || | || |||||||| || || || ||||| || ||| Sbjct 5034 CTGTTGCTGTTGGACGTGACTCCTCTGTCTCTGGGTCTGGAGACGGCCGGTGGCGTCATG 4975 Query 196517 ACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACG 196576 || | | || | | ||||| || | || || |||||| || || || ||| Sbjct 4974 ACGACGCTGATCGCGCGTAACACGACGGTGCCCACCAAGAAGTCGCAGACGTTCTCGACG 4915 Query 196577 TATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCA 196636 || | || || ||||| ||||| | ||||| || | || || || ||||| | Sbjct 4914 TACGCGGACAACCAACCTGGTGTGCTCATTCAGGTGTTCGAGGGCGAGCGCTCGATGACC 4855 Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 || ||| | || || || | ||| | || || || || | || | ||| Sbjct 4854 CGTGACAACAACCTGCTGGGCAAGTTCAACCTGGACGGCATCCCGCCCATGCCTCGTGGT 4795 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 ||||| |||||| |||| ||||| || ||||| |||||||| || ||||| | ||| Sbjct 4794 GTTCCCCAGATTGATGTGACGTTCGACATCGACGCGAATGGAATCCTGAACGTGTCGGCT 4735 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 | || ||| | | ||||| | ||||| || || || |||||||| || || Sbjct 4734 GTTGAGAAGTCGACGGGCAAGGAGAACAAGATCACTATCACGAACGACAAGGGTCGTCTG 4675 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 || ||| || ||||| || |||||| || || || ||||||| | || |||||| Sbjct 4674 TCCCAGGCTGACATTGACCGCATGGTTTCCGAGGCCGAGAAGTACAAGTCGGAGGACGAG 4615 Query 196877 G 196877 | Sbjct 4614 G 4614 >seq288 Length=48189 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || | || || || || |||||| | || || ||| |||| Sbjct 15819 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 15760 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 15759 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 15700 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 15699 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 15640 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||||||||| || ||||| || || | || || || ||| Sbjct 15639 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGT 15592 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || |||||| | || || ||| |||| Sbjct 16047 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 15988 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 15987 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 15928 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 15927 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 15868 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||||||||| || ||||| || || Sbjct 15867 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCT 15836 >seq290 Length=56526 Score = 127 bits (140), Expect = 3e-24 Identities = 389/586 (66%), Gaps = 19/586 (3%) Strand=Plus/Plus Query 77933 GGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGA 77992 |||||| || ||||| || || | | ||||||| || | | |||||||| Sbjct 30114 GGAAAGGTCGTGGAGCGCCCCCAGCAGATGATCATGCGCGTGGCGCTGGGTATTCACAAG 30173 Query 77993 AATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCA 78051 | || || | |||| ||| | |||||||| ||||| || || | |||| || Sbjct 30174 CAAGACATCCAGGCGGCACTGCACACGTATGAGCTCATGTCACAGATGT-TCTTTACGCA 30232 Query 78052 CGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCT 78111 ||| || || || | ||||| || || || || ||||| ||| |||| || |||||||| Sbjct 30233 CGCGACGCCCACGCTCTTTAACGCCGGCACGCCGCGTCCGCAGCTGTCGTCGTGTTTCCT 30292 Query 78112 ACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCA 78171 || || | |||| ||||| ||| | || || |||| || |||| |||| || Sbjct 30293 GCTGGCCATGCAGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGCAGTGCGCGTG 30352 Query 78172 GATTTCTAAGTGGGCTGGTGGTATAGGTCTTCA-TATTCACGATGTTCGTGCAAACAAGT 78230 || || |||||||| || ||||| || | ||| ||| ||| | | || || | || Sbjct 30353 CATCTCCAAGTGGGCCGGAGGTATTGG-CATCAGTATGCACAACATCCGCGCCACGAACA 30411 Query 78231 CCAGGATTAGAGGAACTAATGG-TCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTC 78289 | || | || || || || ||| || | || || || || ||||| ||||| ||| Sbjct 30412 GCTACATCCGCGGCACGAACGGATCA-TCCAACGGGATCATCCCCATGCTGAGGGTCTTC 30470 Query 78290 AATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGGGGTCATTCGCTATG 78346 |||| || || |||||||| |||| | || | | | || || || ||||| || Sbjct 30471 AATGACACGGCCCGCTATGTGGACCAGGGAGGAGGCAAGCGCAAAGGCTCGTTCGCCATC 30530 Query 78347 TACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGT 78406 ||||| || || ||||||||||| || | || || |||| || || ||||| || Sbjct 30531 TACCTGGAGCCGTGGCACGCCGACGTGTTCGAGTTCCTGGAGCTGCGCAAGAACCACGGC 30590 Query 78407 GACGAG--GAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTA 78464 ||||| | | | || || | || | ||| ||| ||||| | || ||||| || | Sbjct 30591 AACGAGCTGCACCGCG-CGC-GCGACCTCTTCTACGCTCTGTGGGTCCCCGATCTGTTCA 30648 Query 78465 TGAAGAGAGTTGAGGAAG-GA--GGTAAATGGTCTCTTTTCTGTCC 78507 ||||| | || ||||| || || || ||| |||||||| || Sbjct 30649 TGAAGCG---TGTGGAAGCGAACGGCAAGTGGAGCCTTTTCTGCCC 30691 >seq220 Length=75399 Score = 123 bits (136), Expect = 3e-23 Identities = 209/299 (70%), Gaps = 13/299 (4%) Strand=Plus/Minus Query 198659 TTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGC 198718 ||||||||| |||||||||||||| ||| | ||| || || || || || || | || Sbjct 4963 TTTCATCGAAATGTTCGTTGGTGTGGGTCCCTCGCGTGTACGTGACCTGTTCAAGGAGGC 4904 Query 198719 ACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTG-----GTAAG 198773 || | || ||||| || | ||||| ||||| ||||| ||||| | | | | Sbjct 4903 TCGCGCGAACGCTCCATGCATTGTGTTCATCGATGAAATTGATGCTGTGGCCCGTGCACG 4844 Query 198774 AAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTT 198833 |||| || | |||| || | | || ||||| |||||||| | ||| | |||||||| Sbjct 4843 AAGCAAGG-GCAACTTCTCCGGC-GGCAATGACGAGCGTGAAAACACGCTCAACCAGCTG 4786 Query 198834 CTCACTGAGATGGATGGTTTTGAC---AATGAGACTGGTATCGTGGTGATTGCTGCTACA 198890 || |||||||||||||| || | |||| ||| | |||||| |||||| ||| Sbjct 4785 CTGGTGGAGATGGATGGTTTCAACTCGAGTGAG---GGTGTGGTGGTGCTTGCTGGTACG 4729 Query 198891 AATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCGTAAGAT 198949 || | ||||| || || | || | || |||||||||||||||||||| |||| Sbjct 4728 AACCGCGCCGATATTCTTGACAAGGCCATCCTGCGTCCCGGTCGATTCGACCGGCAGAT 4670 >seq985 Length=8132 Score = 122 bits (134), Expect = 1e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 3567 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 3626 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || |||||||||||||| || || ||| Sbjct 3627 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCAG 3686 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | ||||||||| Sbjct 3687 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGATTACAAC 3746 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 3747 ATCCAGAAGG 3756 >seq44 Length=74865 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 19748 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 19689 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 19688 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 19629 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 19628 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 19569 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | ||||| || || Sbjct 19568 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTTCGCGGCGG 19522 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 19976 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 19917 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 19916 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 19857 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 19856 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 19797 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | || || ||||| Sbjct 19796 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 19750 >seq459 Length=30576 Score = 102 bits (112), Expect = 1e-16 Identities = 384/594 (65%), Gaps = 20/594 (3%) Strand=Plus/Plus Query 196268 AAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAA 196327 ||||| |||| || || ||||| || ||||| || || |||||||| || ||| | || Sbjct 14964 AAGTCGGAGGTGGACGAGATTGTGCTGGTGGGCGGTTCGACCCGTATCCCCAAGGTGCAG 15023 Query 196328 CAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTTAAACAAAACGA----TCAACCCG 196381 ||| || | | || || |||||| ||||| | || | ||||| Sbjct 15024 CAGCTGAT--CAAGGACTACTTCAACGGCAAAGAGC----CCTCGCGCGGTGTGAACCCC 15077 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT 196441 || || || ||||| || ||||| || || |||| | ||| || |||| || | Sbjct 15078 GACGAGGCTGTTGCCTACGGTGCTGCTGTGCAGGGCGGTATCCTG---GGTGGCGAGCAG 15134 Query 196442 AATAACGT--CCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | || | ||||| | | || || | ||||| | || | |||| |||| |||| Sbjct 15135 GACGACCTGACCAAGGACGTGCTTCTGATCGATGTGGTGCCTCTGTCCCAGGGTATTGAG 15194 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || | |||||| || ||||| || | ||| | | ||||| || ||||| |||||| Sbjct 15195 ACTGTGGGTGGCGTCATGACCAAGCTCATTAACCGCAACACTGTGATCCCGACCAAGAAG 15254 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 || ||| || || || || || || || | ||| | ||| || || | || Sbjct 15255 TCGCAGACCTTCTCGACCTACCAGGACAACCAGCCCGCTGTGCTTATCCAGGTGTTCGAG 15314 Query 196619 GGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || || || | || || | ||||| |||| ||| || || | ||||| | || || | Sbjct 15315 GGCGAGCG-TGCCATGACCAAGGACAACCGTCTTCTGGGCAAGTTCGAGCTCACTGGCCT 15373 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 || | || || | ||||| || |||||| | || ||||| || ||||| || || Sbjct 15374 GCCGCCCGCCCCGCGTGGTGTGCCCCAGATTGAGGTGACGTTCGAGATTGACGCCAACGG 15433 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 || || | || | ||||||||||||| | ||||| | || | ||| ||| || Sbjct 15434 TATCCTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCACGATCAC 15493 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| || || || ||||||| || || || ||||| || || || Sbjct 15494 TGCCGAGAAGGGCCGTCTGTCGCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 15547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657826168228320