Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933315.1_202017-01-04] 4,706 sequences; 39,039,515 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq450 107 2e-18 >seq450 Length=23371 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 20276 TAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGA 20335 ||||| ||||||||||| || || || | ||||||||| |||| | ||| |||| |||| Sbjct 21563 TAGCTTGCAATGTTAAACGGCACACCAAGACCCATGTCGGCCGAGCGCTGGTACATCTGA 21622 Query 20336 CAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCC 20395 || || | ||| ||||| || || || ||||| || |||| ||| || || || || ||| Sbjct 21623 CACGACAACTCCCCGTCCGCCACGTAGAATTGGCAGAACATGTGGCACGGTGGCAGTGCC 21682 Query 20396 ATCAACGACAAGTCCGCCGGGTTCCACGCACACA 20429 ||| || || || |||||||||||| ||| Sbjct 21683 ATCTCGTTCAGATCAGCAGGGTTCCACGCAGACA 21716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441346836245040