Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933315.1_202017-01-04] 4,706 sequences; 39,039,515 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq633 315 9e-81 seq162 141 1e-28 seq182 131 2e-25 seq121 122 1e-22 seq1131 118 1e-21 seq120 116 5e-21 seq180 102 1e-16 >seq633 Length=17021 Score = 315 bits (348), Expect = 9e-81 Identities = 1031/1584 (65%), Gaps = 26/1584 (2%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| || || || || ||||| || || || || ||| Sbjct 5684 GGCATCGACCTGGGCACGACCTACTCGTGCGTGGGCGTGTGGCAGAACGACCGCGTGGAG 5625 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || ||||| || ||||| || || || || ||||| ||||| || || | Sbjct 5624 ATCATCGCCAACGACCAGGGCAACCGCACGACACCGTCCTACGTGGCCTTCACGGACACG 5565 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || || | || || || || || || ||| || |||||| | ||| || || Sbjct 5564 GAGCGCCTTATCGGCGACGCGGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTG 5505 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | |||||| | || || |||||||| | || |||| || || || Sbjct 5504 TTTGATGTCAAGCGTTTGATCGGGCGCAAGTTCACCGACCCTGAAGTGCAGTCGGACATC 5445 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 | | ||||| | | | |||| | || ||| || ||||||| | | || || | Sbjct 5444 AGGCACTGGCCGTTTAAAGTGGCTCGAGGTCCGGAGAATAAGCCGGA-AGTGGTGGTGCA 5386 Query 195605 TTTCAC-GGTGAGAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 |||| |||||| || | ||| | ||||| || || ||||| |||||| || | | Sbjct 5385 GTTCAAAGGTGAGCAGGTG-ACTTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGGTCA 5327 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| |||| ||||| ||| ||| ||||| ||||| | ||||| ||||| | Sbjct 5326 AGATGCGCGAGATCGCGGAGGCTTACATTGGTAAGCAGGTGAAGAACGCAGTGGTGACGG 5267 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||||||||| || || || | || ||||| | Sbjct 5266 TGCCGGCCTACTTCAACGACTCGCAGCGACAGGCGACCAAAGATGCCGGTGTCATTGCTG 5207 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 || | ||| || | || ||||| || || ||||| || || ||||| || ||||||| Sbjct 5206 GTTTGAACGTGCTGCGTATCATCAACGAGCCGACAGCCGCCGCTATTGCCTACGGTCTGG 5147 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||| |||| | ||| | || || ||||||| || || || || || || || | Sbjct 5146 ACAAG---AAGGGTGGAGAGCACAACGTGCTGATCTTCGACCTGGGCGGCGGCACCTTCG 5090 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 |||| || ||||| | |||||||| || || ||||| || ||||| || ||||| || | Sbjct 5089 ATGTGTCGCTTCTAACTATTGAAGACGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACA 5030 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTC 196021 | || || || || ||||| ||||| || || || || ||||| | || ||| Sbjct 5029 CGCACCTGGGCGGCGAAGACTTCGACAACCGCCTCGTCGAGTTCTTTGT-GCAAGAATTC 4971 Query 196022 CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACT 196081 || ||| || || ||||| | | || | | || || || || || | || Sbjct 4970 AAGCGCAAGCATCGCAAGGATATGACGGTGAACTCGCGCGCGCTGCGGCGTCTGCGTACG 4911 Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141 || || || |||||||| || || || || | || ||| | | |||||||| Sbjct 4910 GCGTGCGAGCGTGCCAAGCGTACACTGTCGATGTCTGCGCAAGCGTACATCGAGATTGAC 4851 Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTA 196201 ||| || | || || | || ||| | | || ||||| || || || || || || | Sbjct 4850 TCGCTGCTGGATGGTGTCGATTTCAACTCTACCATTACGCGCGCGCGGTTCGAGGATCTT 4791 Query 196202 AACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAG 196261 ||| || ||| | ||| ||||| || || | || || || || ||| | ||| Sbjct 4790 TGTGGTGAATTCTTTCGCAAGACAATGGACCCAGTGGCGCAGGTTCTACGAGACTCGAAG 4731 Query 196262 ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAG 196321 || ||| |||| | || | || || ||||| || || || ||||| |||||| Sbjct 4730 CTGTCGAAGAGCCAGGTGAACGAGGTGGTGCTAGTGGGCGGCTCGACTCGTATCCCGAAG 4671 Query 196322 ATTCAACAGATGCT-TTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCC 196380 | || ||| || | || | ||| ||||| ||| | | ||| | |||||||| Sbjct 4670 GTGCAGCAGTTGTTGATCGA-CTTTTTCAACGGTAAGAAGCTCTTCAAGTCCATCAACCC 4612 Query 196381 GGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA 196440 ||| ||||| | || || ||||| | || ||||| || || || || |||| Sbjct 4611 GGACGAAGCCATAGCGTACGGTGCTACAGTGCAGGCGGCCATCCTGAGCGGCCATGAC-- 4554 Query 196441 TAATAACGTCCAA-------GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 | | ||||||| || || |||||||| || || || || | || || || Sbjct 4553 TCGT--CGTCCAAGTTGCAGGACCTGCTGCTACTGGACGTGGCGCCGCTGTCTCTTGGCT 4496 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 | || || || || || || ||||| || | || | ||||| || |||| | | Sbjct 4495 TGGAGACGGCTGGCGGAGTCATGACCAAGCTGATCCCGCGCAACACCACGGTTCCAGCCA 4436 Query 196554 AGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| | |||| || || ||||| | || || || | ||||| || ||||| Sbjct 4435 AGAAGGCGC-AGTCGTTCTCGACGTACGCGGACAACCAGTCCGGTGTCTTGATCCAAGTG 4377 Query 196613 TATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGAC 196671 | || || || || || | || || ||||| || || || ||| || ||| Sbjct 4376 TTCGAGGGTGAGCGTTCGATGACCTGTGACAATCATCTTCTGGGCAAGTTTAACTTGGAC 4317 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || || || | || | ||||| || || ||| | || ||||| | || | Sbjct 4316 -GGCATCCCGCCCATGCCTCGCGGTGTGCCGCAAATTGACGTGACGTTCGACGTGGATGT 4258 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || ||| | ||||| | || | ||| ||| | | ||||| | ||||| | Sbjct 4257 CAACGGCATTTTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCAT 4198 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || || || |||||||| ||| | ||| || || || || || |||||| | || || Sbjct 4197 CATCACGAACGACAAGGGCCGGTTATCTCAGTCCGAGATCGACCGCATGGTTGATGACGC 4138 Query 196852 GGAAAAGTACAGGGAAGAAGACGA 196875 || ||||||| ||| |||| || Sbjct 4137 TGAGAAGTACAAGGACCAAGATGA 4114 >seq162 Length=44331 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || | || || || || |||||| | || || ||| |||| Sbjct 11672 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 11613 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 11612 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 11553 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 11552 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 11493 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||| ||||| || ||||| || || | || || || ||| Sbjct 11492 ATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGT 11445 Score = 127 bits (140), Expect = 3e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 ||||| || | || || || || |||||| | || || ||| |||| ||| | ||||| Sbjct 11888 GTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCGGACTCGATCGAC 11829 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 ||| | || || ||||| || ||||||||||| || || || ||||| || || ||| Sbjct 11828 AACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCCTGATT 11769 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 || ||||| || ||||||||||| || || || || || |||||| | || |||||| Sbjct 11768 TTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAACATCCAGAAGGAG 11709 Query 172054 TCTACTCTACACCTTGTTCT 172073 ||||| || ||||| || || Sbjct 11708 TCTACGCTGCACCTGGTGCT 11689 >seq182 Length=41727 Score = 131 bits (144), Expect = 2e-25 Identities = 429/654 (66%), Gaps = 17/654 (3%) Strand=Plus/Minus Query 77864 GAACGTGACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAG 77923 || || |||||||| | | || || || || ||||| ||||| | ||||| Sbjct 20992 GACCGGGACTTTGAGTACGACTACTTCGGCTTCAAGACGCTCGAGCGGGGCTACCTCTTC 20933 Query 77924 TACATGGATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGT 77983 | || | |||||| || ||||| || || | | ||||||| || | | ||| Sbjct 20932 CGCGTGAACGGAAAGGTCGTGGAGCGCCCCCAGCAGATGATCATGCGCGTGGCGCTGGGT 20873 Query 77984 ATTCATGGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTAT 78042 ||||| | || || | |||| ||| | |||||||| ||||| || || | Sbjct 20872 ATTCACAAGCAAGACATCCAGGCGGCACTGCACACGTATGAGCTCATGTCACAGATGT-T 20814 Query 78043 GTTTATTCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATC 78102 |||| ||||| || || || | ||||| || || || || ||||| ||| |||| || Sbjct 20813 CTTTACGCACGCGACGCCCACGCTCTTTAACGCCGGCACGCCGCGTCCGCAGCTGTCGTC 20754 Query 78103 TTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGA 78162 |||||||| || || | |||| ||||| ||| | || || |||| || |||| | Sbjct 20753 GTGTTTCCTGCTGGCCATGCAGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGCA 20694 Query 78163 GTGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGC 78222 ||| || || || |||||||| || ||||| || || ||| ||| | | || || Sbjct 20693 GTGCGCGTGCATCTCCAAGTGGGCCGGAGGTATTGGCATTAGTATGCACAACATCCGCGC 20634 Query 78223 AAACAAGTCCAGGATTAGAGGAACTAATGG-TCAGTCTGATGGAATTATTCCTATGCTTA 78281 | || | || | || || || || ||| || | || || || || ||||| | Sbjct 20633 CACGAACAGCTACATCCGCGGCACGAACGGATCA-TCCAACGGGATCATCCCCATGCTGA 20575 Query 78282 GGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGGGGTCAT 78338 |||| ||||||| || || |||||||| |||| | || | | | || || || | Sbjct 20574 GGGTCTTCAATGACACGGCCCGCTATGTGGACCAGGGAGGAGGCAAGCGCAAAGGCTCGT 20515 Query 78339 TCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCA 78398 |||| || ||||| || || ||||||||||| || | || || |||| || || | Sbjct 20514 TCGCCATCTACCTGGAGCCGTGGCACGCCGACGTGTTCGAGTTCCTGGAGCTGCGCAAGA 20455 Query 78399 ACCAGGGTGACGAG--GAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGA 78456 |||| || ||||| | | | || || | || | ||| ||| ||||| | || || Sbjct 20454 ACCACGGCAACGAGCTGCACCGCG-CGC-GCGACCTCTTCTACGCTCTGTGGGTCCCCGA 20397 Query 78457 TCTTTTTATGAAGAGAGTTGAGGAAG-GA--GGTAAATGGTCTCTTTTCTGTCC 78507 ||| || |||||| | || ||||| || || || ||| |||||||| || Sbjct 20396 TCTGTTCATGAAGCG---TGTGGAAGCGAACGGCAAGTGGAGCCTTTTCTGCCC 20346 >seq121 Length=50930 Score = 122 bits (134), Expect = 1e-22 Identities = 208/298 (70%), Gaps = 13/298 (4%) Strand=Plus/Minus Query 198660 TTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCA 198719 |||||||| |||||||||||||| ||| | ||| || || || || || || | || Sbjct 4534 TTCATCGAAATGTTCGTTGGTGTGGGTCCCTCGCGTGTACGTGACCTGTTCAAGGAGGCT 4475 Query 198720 CGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTG-----GTAAGA 198774 || | || ||||| || | ||||| ||||| ||||| ||||| | | | || Sbjct 4474 CGCGCGAACGCTCCATGCATTGTGTTCATCGATGAAATTGATGCTGTGGCCCGTGCACGA 4415 Query 198775 AGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTC 198834 ||| || | |||| || | | || ||||| |||||||| | ||| | |||||||| | Sbjct 4414 AGCAAGG-GCAACTTCTCCGGC-GGCAATGACGAGCGTGAAAACACGCTCAACCAGCTGC 4357 Query 198835 TCACTGAGATGGATGGTTTTGAC---AATGAGACTGGTATCGTGGTGATTGCTGCTACAA 198891 | |||||||||||||| || | |||| ||| | |||||| |||||| ||| | Sbjct 4356 TGGTGGAGATGGATGGTTTCAACTCGAGTGAG---GGTGTGGTGGTGCTTGCTGGTACGA 4300 Query 198892 ATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCGTAAGAT 198949 | | ||||| || || | || | || |||||||||||||||||||| |||| Sbjct 4299 ACCGCGCCGATATTCTTGACAAGGCCATCCTGCGTCCCGGTCGATTCGACCGGCAGAT 4242 >seq1131 Length=8162 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 4577 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTAGAGCCGTCC 4518 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || |||||||||||||| || || ||| Sbjct 4517 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCAG 4458 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | || |||||| Sbjct 4457 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 4398 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 4397 ATCCAGAAGG 4388 >seq120 Length=50941 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 30839 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 30898 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 30899 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 30958 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 30959 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 31018 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | || || ||||| Sbjct 31019 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 31065 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 31067 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 31126 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 31127 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 31186 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 31187 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 31246 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | ||||| || || Sbjct 31247 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTTCGCGGCGG 31293 >seq180 Length=41816 Score = 102 bits (112), Expect = 1e-16 Identities = 384/594 (65%), Gaps = 20/594 (3%) Strand=Plus/Minus Query 196268 AAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAA 196327 ||||| |||| || || ||||| || ||||| || || |||||||| || ||| | || Sbjct 15648 AAGTCGGAGGTGGACGAGATTGTGCTGGTGGGCGGTTCGACCCGTATCCCCAAGGTGCAG 15589 Query 196328 CAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTTAAACAAAACGA----TCAACCCG 196381 ||| || | | || || |||||| ||||| | || | ||||| Sbjct 15588 CAGCTGAT--CAAGGACTACTTCAACGGCAAAGAGC----CCTCGCGCGGTGTGAACCCC 15535 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT 196441 || || || ||||| || ||||| || || |||| | ||| || |||| || | Sbjct 15534 GACGAGGCTGTTGCCTACGGTGCTGCTGTGCAGGGCGGTATCCTG---GGTGGCGAGCAG 15478 Query 196442 AATAACGT--CCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | || | ||||| | | || || | ||||| | || | |||| |||| |||| Sbjct 15477 GACGACCTGACCAAGGACGTGCTTCTGATCGATGTGGTGCCTCTGTCCCAGGGTATTGAG 15418 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || | |||||| || ||||| || | ||| | | ||||| || ||||| |||||| Sbjct 15417 ACTGTGGGTGGCGTCATGACCAAGCTCATTAACCGCAACACTGTGATCCCGACCAAGAAG 15358 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 || ||| || || || || || || || | ||| | ||| || || | || Sbjct 15357 TCGCAGACCTTCTCGACCTACCAGGACAACCAGCCCGCTGTGCTTATCCAGGTGTTCGAG 15298 Query 196619 GGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || || || | || || | ||||| |||| ||| || || | ||||| | || || | Sbjct 15297 GGCGAGCG-TGCCATGACCAAGGACAACCGTCTTCTGGGCAAGTTCGAGCTCACTGGCCT 15239 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 || | || || | ||||| || |||||| | || ||||| || ||||| || || Sbjct 15238 GCCGCCCGCCCCGCGTGGTGTGCCCCAGATTGAGGTGACGTTCGAGATTGACGCCAACGG 15179 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 || || | || | ||||||||||||| | ||||| | || | ||| ||| || Sbjct 15178 TATCCTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCACGATCAC 15119 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| || || || ||||||| || || || ||||| || || || Sbjct 15118 TGCCGAGAAGGGCCGTCTGTCGCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 15065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657823701244320