Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933315.1_202017-01-04] 4,706 sequences; 39,039,515 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1044 224 2e-52 seq182 203 5e-46 seq3491 194 3e-43 seq96 143 4e-28 seq123 136 6e-26 seq761 113 7e-19 seq428 104 4e-16 seq234 98.7 2e-14 seq115 96.9 5e-14 seq34 96.9 5e-14 seq1271 93.3 7e-13 seq806 93.3 7e-13 seq174 86.0 1e-10 >seq1044 Length=9095 Score = 224 bits (248), Expect = 2e-52 Identities = 339/480 (71%), Gaps = 4/480 (1%) Strand=Plus/Minus Query 2018916 CCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCC 2018975 |||||| | || |||||||| ||| |||| | ||| | ||||||||| || | Sbjct 4564 CCGTGGGTGGAGAAGTACCGGCCGCGCATGCTGGCGGACGTGGTGGGCAACCGCGACACG 4505 Query 2018976 GTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGC 2019035 | || || |||| |||| | ||||||||| | |||||| | ||| ||||| Sbjct 4504 ATCGCGAGTCTGCAGGCCATGGCGCAAGCGGGCAACATGACGAACCTCATCCTGTCGGGC 4445 Query 2019036 CCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCG 2019095 ||||| || ||||| |||||||| |||||| ||| ||||||||| || | ||| | Sbjct 4444 CCGCCGGGAACGGGGAAGACCACCAGCATCCTGTGTTTGGCGCGCGAACTGCTAGGCACC 4385 Query 2019096 GCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTG 2019155 || | | |||||||||| || ||||| ||||| || || |||||| | ||| ||| Sbjct 4384 AGCGTCAAACAGGCCGTGCTGGAGCTCAACGCGTCCGATGACCGCGGCATCGACACGGTG 4325 Query 2019156 CGTAGAATCATCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACA 2019213 || | | |||||| | ||| | ||||| || ||||| || |||||||||| Sbjct 4324 CGCACGAAGATCAAGATGTTTGCGCAGCAAAAAGTGACG--CTGCCCCCGGGCCGCCACA 4267 Query 2019214 AGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGAT 2019273 || | | ||||| || || ||||||| | || | |||||||| ||||| || || Sbjct 4266 AGATTGTGATCCTGGACGAAGCCGACTCGATGACAGCCGCGGCCCAACAGGCGCTGCGCC 4207 Query 2019274 CGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGA 2019333 |||||||| | | | | ||| ||| |||| |||||||||||||||| ||| | | Sbjct 4206 GCACCATGGAGATCTTCTCGGCCACCACGAGGTTCGCGCTGGCCTGCAACAACTCGACTA 4147 Query 2019334 TGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACG 2019393 | ||||||| || |||||||||| ||||||||| | ||||| ||||||| |||||| Sbjct 4146 AGATCATCGAGCCCATCCAGAGCCGCTGCGCCATCCTCCGCTTCACGCGCCTACCCGACG 4087 >seq182 Length=41727 Score = 203 bits (224), Expect = 5e-46 Identities = 349/505 (69%), Gaps = 15/505 (3%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| |||||||| |||||||| || ||||| | |||||||| | | |||||||| Sbjct 20540 CTGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGTTGGA 20599 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| ||||| | |||| | || |||||| | |||||| || ||| Sbjct 20600 TGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCATACTAATGCC 20659 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || |||||| |||||||||| |||||||| || ||||| ||||| |||||||| Sbjct 20660 AATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCCCTC 20719 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||||||||| ||| |||| ||| ||| || |||||||| ||||| |||| |||||| Sbjct 20720 AATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGTGCC 20779 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||| || ||||||||||||||||| ||| | || || |||||| ||| || || Sbjct 20780 GGCGTTAAAGAGCGTGGGCGTCGCGTGCGTAAAGAACATCTGTGACATGAGCTCATACGT 20839 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | ||| |||| | |||||| | | | | ||||| || || || Sbjct 20840 ---GTGCAGTGCCGCCTGGATGTCTTG--CTTGTGAATACCCA-----GC-----GCCAC 20884 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959 |||||||||||| | |||||| ||||| ||||| || ||| | |||||| Sbjct 20885 GCGCATGATCATCTGCTGGGGGCGCTCCACGACCTTTCCGTTCACGCGGAAGAGGTAGCC 20944 Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019 ||| || ||| | ||| ||||| ||| | | ||| || |||||| |||||| Sbjct 20945 CCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTCCCGGTCGTGGATGATGGC 21004 Query 2074020 GGCGTCGAGGGCCTCCTTGTGCGCC 2074044 | || || | ||||||||| || Sbjct 21005 CGAGTTAAGCTCGTCCTTGTGCTCC 21029 Score = 159 bits (176), Expect = 5e-33 Identities = 289/429 (67%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643 |||| ||||| |||| ||| | ||||| |||||||||||||| | |||| Sbjct 20111 CTCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTT 20170 Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703 | | |||||||||| ||||||| | ||| | |||||||| |||||||| | |||||| Sbjct 20171 GGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGC 20230 Query 2071704 CGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNN 2071763 |||| | || | || | || | | |||||| |||| Sbjct 20231 GAACCACAGCTGCTGGGCATTGATCGTCTTGCGCGCGCGCCCCTCCTTCTCGTACTTCTC 20290 Query 2071764 NNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCA 2071823 | || | || || || |||| |||||||| || ||||| ||||| ||||| Sbjct 20291 GTACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCCGGGGGCCTCATTGGGGCA 20350 Query 2071824 AAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAG 2071883 || || ||| | |||| | |||| || ||| ||||| ||| |||||| Sbjct 20351 GAAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAACAGATCGGGGACCCACAG 20410 Query 2071884 GCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAG 2071943 |||| ||||| |||||||| |||| | ||| |||||||||||||| ||| || || Sbjct 20411 AGCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGCTCCAG 20470 Query 2071944 CCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTT 2072003 | |||| | ||||||||||||||||||||||||| ||| || | ||| |||||||| Sbjct 20471 GAACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAACGAGCCTTTGCGCTT 20530 Query 2072004 GCCGCCGCC 2072012 ||| || || Sbjct 20531 GCCTCCTCC 20539 >seq3491 Length=1496 Score = 194 bits (214), Expect = 3e-43 Identities = 190/243 (78%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || ||||||| ||||||||||||||| |||||| |||||||||||||||| ||| Sbjct 1270 ACACCAGCCTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGC 1211 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG----CACCC 794008 ||||||| |||||||| ||||||||| | ||| || || ||| | ||||| Sbjct 1210 GAGATCATATCCATCCAGTCGAACGGGTT---CTTCACGTTGTAGATCTTGGATGCACCC 1154 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 || || |||||||||||||| ||||| || ||||||||||||||||| || | ||| Sbjct 1153 -AGTGAGTACAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTT 1095 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 ||||||||| ||| ||||||| ||||| ||||| || ||||| | ||| ||| | || || Sbjct 1094 CATGCCGATCAGCTCCACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGC 1035 Query 794129 CTC 794131 || Sbjct 1034 GTC 1032 Score = 192 bits (212), Expect = 9e-43 Identities = 240/327 (73%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||| | ||||| |||| || || |||||||||||||||||| Sbjct 949 CCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGGCATGAGGCCGCGCTTC 890 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||||| |||||||| || |||||||| |||||||| || Sbjct 889 TTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCCCTCCACGGCGGCGAAC 830 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || ||||| | | | | | | | || |||||| | |||||| Sbjct 829 GCCAGCAGACGCTCCGGGTAGGA--CGAAACACGAGG-GTCACACCACTTGAGCGCCCAG 773 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 ||||| ||| ||| | || | ||| |||||||| || | | ||| |||||||| Sbjct 772 CGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCAAGTGATCCTTCTCC 713 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 || | |||||||| ||| |||||||| || |||||||| ||| ||||||||||| ||| Sbjct 712 ACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTCCGAGTGGATGTTCTCG 653 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||||||||| || |||||| Sbjct 652 ATGGCGATCTGGAAGCCGTAGAAGCAG 626 Score = 158 bits (174), Expect = 2e-32 Identities = 190/254 (75%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || ||||| ||||| || ||||| ||||||||||| |||||||||| Sbjct 622 GCCTCCGGCACTTGCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCG 563 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||||| ||||| || || || ||||||||||| ||||| ||||||| ||| | || Sbjct 562 TCGCTGGCAGCGAAGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGG 503 Query 796270 GAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 |||||| | |||| || || ||||| | ||||||||| ||||| || || || Sbjct 502 TTCCCCCAGTCCTTCAGGTCGTGCACC-AGGTCCAGCTCCTCGGCCGTCCAGAACGACGC 444 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGGAACAGAACAAAG 796386 ||| ||||| |||||||||| ||| | ||| || | |||| |||||||| || || Sbjct 443 CTCCGCCTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGGAACAGCACGAAC 386 Query 796387 CGATTGGGGTTCTC 796400 || || |||||||| Sbjct 385 CGGTTCGGGTTCTC 372 >seq96 Length=55162 Score = 143 bits (158), Expect = 4e-28 Identities = 224/318 (70%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 118582 CGCCCAGGAGGACGCGCGTGACCGTGTTTGACCCGTTCTTGCGCACGCCGCGCATGCACA 118641 ||||||| | | || |||||| ||| | | ||| |||| |||||||||||| || Sbjct 36057 CGCCCAGCACGGAGCTCGTGACGGTGCTGGCGCCGCTCTTCTCGACGCCGCGCATGACCA 36116 Query 118642 CGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCGCGCCCG-TGACCTCGCTG 118700 |||||||||| | |||||| ||| ||| | ||||| | | || | |||| | || Sbjct 36117 TGCACATGTGGGTGGCCTCGATCACAACGGCCACGCC-CTTGGGCTCAATGACGCCCATG 36175 Query 118701 ATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATG 118760 ||| ||||||||| ||||| |||||||||||| | ||| ||| | | Sbjct 36176 ATGGCGGTGGCGATCTGCTTGGTGAGGCGCTCCTGCACCTGCAGACGGCGCGAAAAGACC 36235 Query 118761 TCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACG 118820 ||| | ||||| || |||||| ||||| | | |||| ||| | ||| || | | Sbjct 36236 TCGCTCACGCGCGCGAGCTTGCTGAGGCCCAGCACTTTGCCGTTGGGGATGTAACCGATG 36295 Query 118821 TGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCG 118880 ||| ||||||| | || |||| || |||||||||||||||||| | | ||| ||||| Sbjct 36296 TGCACCTTGCCCGTGAACGGCACCATGTGGTGCTCGCACATGGAGTACAGGTCGATGTCC 36355 Query 118881 CGCACGGTCACCATCTCG 118898 |||||| | ||||||||| Sbjct 36356 CGCACGATGACCATCTCG 36373 >seq123 Length=50705 Score = 136 bits (150), Expect = 6e-26 Identities = 175/238 (74%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 1217382 GACCGACCCATTGTGCACCGCGACCTCAAGAGCAGCAACCTGTTGGTCGACGACAATTTC 1217441 || || || ||| ||||||| |||||||||||| |||| ||||||| ||| | || || Sbjct 5957 GAGCGGCCGATTCTGCACCGAGACCTCAAGAGCCCCAACTTGTTGGTGGACAAGAACTTT 6016 Query 1217442 ACGATCAAGGTGGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGC-GACGATGAC 1217500 | || ||| || | ||||||||| | |||||| || | || ||| ||| ||||| Sbjct 6017 AACATTAAGTTGTCGGACTTTGGCCTGGCCCGCGTCAAGGCTCAC-GTGCAGACCATGAC 6075 Query 1217501 ---CCGGTGCGGCACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCGAGCGCTACTC 1217557 | ||||||||| ||||| |||||||||| | ||| || | || ||| | Sbjct 6076 GGGCAACTGCGGCACGGTCCAGTGGATGGCGCCCGAGGTGCTGGGCAACCAGAAGTACAC 6135 Query 1217558 GGAAAAGGCCGACATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCACGCGCAAG 1217615 ||| ||||||||| ||| ||| ||||| |||||||| ||||||||| ||||| || || Sbjct 6136 GGAGAAGGCCGACGTCTTCTCGTTCGGGATCGTCATCTGGGAGATCGTCACGGGCGAG 6193 >seq761 Length=13676 Score = 113 bits (124), Expect = 7e-19 Identities = 229/336 (68%), Gaps = 7/336 (2%) Strand=Plus/Minus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 ||||| |||||||||| || || || || |||| | ||| | || | || |||| Sbjct 12790 TGCCGCCGGTGCCGTTCTTGAAGCCCACAGGCATGGACAGGCCACTCGTGAGCTCACGGT 12731 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAAT 2175195 ||| |||| |||||| ||||| ||||| | || ||||||| ||| ||||| ||| Sbjct 12730 GCAGCTGGGACTCGGTCGTGCGAGCGCCAATAGCCCCCCACGACACCAGGTCGGCCGTGA 12671 Query 2175196 AGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACCA 2175255 | ||| | | | | ||||||| | ||||||| || | || || || Sbjct 12670 ACTGCGGTGAGATGGTGTCCAAGAACTCGAGACTCACGGGCAACCCCAG--CG-CGTTCA 12614 Query 2175256 GGTCGCGCAGCAGTCGACG--CGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTC 2175313 ||| |||||||| || ||||| || | ||| | | |||| | ||| ||| Sbjct 12613 CGTCCAGCAGCAGTTTGCGTGCGATGCGG--ATGCCCTTGTTGATGCGGAAGGACTGGTC 12556 Query 2175314 GAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATA 2175373 ||||| |||||| || || |||||||| |||||||||||||||||||| |||| || Sbjct 12555 CAGGTCCGGGTCGTTGATGAGTCCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCGAAGTA 12496 Query 2175374 GGCGCGCATGACCACCAGGAGAGCGTCGCCGACCTC 2175409 | |||||||| ||||| || || || ||| ||| Sbjct 12495 CGTGCGCATGATGACCAGCAGCTCGCCGTCGAGCTC 12460 >seq428 Length=24272 Score = 104 bits (114), Expect = 4e-16 Identities = 115/150 (77%), Gaps = 4/150 (3%) Strand=Plus/Minus Query 679834 AGCCCATCGAGCGAGCGGATGCGCGACAGCGCCACGTAGGCCTGGCCACAGTCAAAGATG 679893 ||||| || |||||||| | ||| ||||| ||||| |||||||||||| | || || | | Sbjct 5078 AGCCCTTCCAGCGAGCGCACGCGGGACAGTGCCACATAGGCCTGGCCAAACTCGAACACG 5019 Query 679894 C-CG-CTCATCGAGATGACAGCGCGGTCCAACGACATGCCCTGGCACTTGTGGATGGTCA 679951 | || | ||| | |||||| ||| ||||||| ||||||| |||||||||| | | Sbjct 5018 CGCGACAGATC--CAACACAGCGGCGTCGAACGACAGTCCCTGGCTCTTGTGGATGCTGA 4961 Query 679952 TGGCCCACGCCAGCAGCAGTGGCACCTGCC 679981 ||||||| |||||| || |||| ||||| Sbjct 4960 TGGCCCAGGCCAGCGCCAACGGCAGCTGCC 4931 >seq234 Length=36228 Score = 98.7 bits (108), Expect = 2e-14 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 2035628 CCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGG 2035687 ||| || ||| | ||||| |||||||||||| | ||||||||| ||| || || |||| Sbjct 16900 CCTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGAGCCTGCTGGACTTGGC 16959 Query 2035688 GTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTT 2035747 |||| | ||||||| | | || ||||| ||| ||||| |||| |||||| |||| || Sbjct 16960 GTGCGCTAAGGTGGCCAGCATGATTAAGGGAAAGACGCCCCAGGAGATCCGCGAGACGTT 17019 Query 2035748 TAACATC 2035754 |||||| Sbjct 17020 CAACATC 17026 >seq115 Length=51400 Score = 96.9 bits (106), Expect = 5e-14 Identities = 170/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 1217358 GGCG-TGGCCTATTTGCACGGGCGCGA-CCGACCCATTGTGCACCGCGACCTCAAGAGCA 1217415 |||| |||| ||| ||||||| ||| | |||| || | ||||||||||||||| Sbjct 15411 GGCGCTGGCGTATCTGCACGGCCGCCAGCCGATT-ATCATCCACCGCGACCTCAAGTCGC 15469 Query 1217416 GCAACCTGTTGGTCGACGACAATTTCACGATC-AAGGTGGCCGACTTTGGCTTTGCCCGC 1217474 |||| || || ||||| || | || | ||| | ||||||||| | |||| Sbjct 15470 TCAACGTGCTGCTCGACAACCGGCTG-CGTGCGAAGCTCAGCGACTTTGGGCTCAGCCGC 15528 Query 1217475 ATCCGCGAGGACAATGCGACGATGACC--CGGTGCGG-CACGCCGGCGTGGACGGCGCCC 1217531 ||| || | | | ||||||||| ||| | || ||||| | ||||||||||||| Sbjct 15529 GAGCGCTCGGCCGACGACACGATGACCAACGGCGTGGGCACGCTGCTGTGGACGGCGCCC 15588 Query 1217532 GAGATCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGACATCTACTCTTTCGGCATCGT 1217590 |||||||||||||||||| |||| || ||||| ||| | ||||| | || |||||| Sbjct 15589 GAGATCCTGCGCGGCGAGACCTACAGCGAGAAGGCGGACGTGTACTCGTACGCCATCGT 15647 Score = 89.7 bits (98), Expect = 8e-12 Identities = 159/230 (69%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 1249577 GCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAACCTG 1249636 || |||||||||| | | | ||| || |||||||||| |||||| |||| || Sbjct 15418 GCGTATCTGCACGGCCGCCAGCCGATTATCATCCACCGCGACCTCAAGTCGCTCAACGTG 15477 Query 1249637 CTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCATCCGCGAG 1249696 ||| ||||| || | || ||| | ||||||||| ||| ||| ||| | Sbjct 15478 CTGCTCGACAACCGGCTGCGTGCGAAGCTCAGCGACTTTGGGCTCAGCCGCGAGCGCTCG 15537 Query 1249697 GACAATGCCACCATGACG--CGGTGCGG-CACGCCGGCGTGGACGGCGCCCGAGGTCATC 1249753 | | | | ||| ||||| ||| | || ||||| | |||||||||||||||| || | Sbjct 15538 GCCGACGACACGATGACCAACGGCGTGGGCACGCTGCTGTGGACGGCGCCCGAGATCCTG 15597 Query 1249754 CGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 ||||||||| |||| |||| || ||||| |||||| || |||||| Sbjct 15598 CGCGGCGAGACCTACAGCGAGAAGGCGGACGTGTACTCGTACGCCATCGT 15647 >seq34 Length=79945 Score = 96.9 bits (106), Expect = 5e-14 Identities = 171/243 (70%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 1249560 CGGCGGCCACGGGCGTCGCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATC 1249619 || || ||| | || || | || |||||| |||| |||||||| ||| | ||||| |||| Sbjct 75685 CGTCGCCCATGCGC-TCACGTACCTGCACTCGCTGGACCCGCCAGTCCTGCACCGTGATC 75743 Query 1249620 TCAAGAGCAGCAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG-- 1249677 ||||| || ||| | ||| || | ||||| | | ||||| | |||||||| Sbjct 75744 TCAAGTCCAAGAACATCCTGCTCAGCTCCGAGTTGGAAGCGAAGGTCACGGACTTTGGCA 75803 Query 1249678 TCTCGCGCGCATCCGCGAGGACAATGCCACCATGACG--CGGTGC-GGCACGCCGGCGTG 1249734 |||| |||| | | ||||| |||||||| ||||| |||||| || ||| Sbjct 75804 TCTCCCGCGAAA--GGATTGACAAG---ACCATGACTGCCGGTGTAGGCACGTCGCTGTG 75858 Query 1249735 GACGGCGCCCGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGAT 1249794 || |||||||||||| || |||||| | |||||||| |||||| ||| |||| | Sbjct 75859 GATGGCGCCCGAGGTGATGATAGGCGAGAGGTACGACGACAAGGCCGACATCTTCTCGTT 75918 Query 1249795 CGG 1249797 ||| Sbjct 75919 CGG 75921 >seq1271 Length=6896 Score = 93.3 bits (102), Expect = 7e-13 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 1217394 GTGCACCGCGACCTCAAGAGCAGCAACCTGTTGGTCGACGACAATTTCACGATCAAGGTG 1217453 |||||||||||||||||| | ||| || || | || ||| ||| |||| || Sbjct 6057 GTGCACCGCGACCTCAAGTCGAAGAACGTGCTGCTAAACCGCAAGTTCCATGCCAAGCTG 6116 Query 1217454 GCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGCGACGATGAC--CCGGTGCGG-C 1217510 |||||||||| | ||||| | | | ||| | ||||||||| | || | || | Sbjct 6117 AGCGACTTTGGCGTCAGCCGCAAGACCCACGTCAACGAGACGATGACGTCTGGCGTGGGC 6176 Query 1217511 ACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGAC 1217570 |||| | |||||| |||||||||||| | ||| || |||||||| ||||||||| Sbjct 6177 ACGCTGCTGTGGACCGCGCCCGAGATCATTGAGGGCAAGAAGTACTCGGAGAAGGCCGAC 6236 Query 1217571 ATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCACGCGCAAGCAGCC 1217620 ||||| || | || |||| ||| ||||| |||| || ||| ||| Sbjct 6237 ATCTATTCGCTTGGAGTCGTGCTGTCAGAGATGGACACGTGCGAGCCGCC 6286 >seq806 Length=12602 Score = 93.3 bits (102), Expect = 7e-13 Identities = 160/227 (70%), Gaps = 14/227 (6%) Strand=Plus/Minus Query 1249584 TGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAACCTGCTGGTCG 1249643 ||||| || | || ||| || | ||||||||||||||| || ||| | ||| || Sbjct 1784 TGCACTCGTTGGAGCCGGTGGTGCTGCACCGCGATCTCAAGTCCATGAACATCCTGCTCA 1725 Query 1249644 AC---GACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCATCCGCGAGGACA 1249700 || |||| | | || |||| | | ||||||||| || |||||| | ||| Sbjct 1724 ACTCGGACGGGGA---TGCCAAGCTCACGGACTTTGGTGTCTCGCGCAAATG----GACG 1672 Query 1249701 ATGC-CACCATGACG--CGGTGCGG-CACGCCGGCGTGGACGGCGCCCGAGGTCATCCGC 1249756 || |||||||||| ||| | || ||||| | ||||| ||||||||||||||| Sbjct 1671 GTGGACACCATGACGGCCGGCGTGGGCACGCGGCGGTGGATGGCGCCCGAGGTCATGATG 1612 Query 1249757 GGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 ||| ||||||||||| |||||||| ||| |||| |||| |||| Sbjct 1611 GGCAAGCGCTACGACACAAGCGCCGACATCTTCTCGTTCGGTGTCGT 1565 Score = 86.0 bits (94), Expect = 1e-10 Identities = 170/244 (70%), Gaps = 21/244 (9%) Strand=Plus/Minus Query 1249571 GGCGTCG-CCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAG---AG 1249626 ||||| | |||| || ||| |||||||||| || | |||||||| |||||| || Sbjct 3991 GGCGTTGACCTACCTCCACTCGCTCGACCCCAAGGTGCTGCACCGCGACCTCAAGTCGAG 3932 Query 1249627 CAGCAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCG 1249686 | || | ||||| ||| | ||| ||| |||| | | |||||||| |||| || Sbjct 3931 GAACATCTTGCTG-TCGCC--CGAACTGGATGCCAAGCTCTCGGACTTTGGGGTCGCCCG 3875 Query 1249687 CATCCGCGAGGACAA-TGC--CACCATGAC----GCGGTGCGGCACGCCGGCGTGGACGG 1249739 || | ||| | | || |||||| | |||| |||||| || |||| || Sbjct 3874 CA------AATACAGCTTCAGCAGCATGACCGCAGGGGTG-GGCACGTCGCTCTGGATGG 3822 Query 1249740 CGCCCGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCA 1249799 | ||||||||||| | |||||| || ||||||| |||||||| ||| |||| ||||| Sbjct 3821 CCCCCGAGGTCATGCTCGGCGACCGGTACGACGCCAGCGCCGACATCTTCTCGTTCGGCG 3762 Query 1249800 TCGT 1249803 |||| Sbjct 3761 TCGT 3758 >seq174 Length=43031 Score = 86.0 bits (94), Expect = 1e-10 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2175306 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 2175365 || ||||||||||| |||||| || ||| |||||||| |||||||| ||||| ||||| Sbjct 8480 GATCCGTCGAGGTCCGGGTCGTTGATCAGACCCTTCCATCCGACGGTGGTGCGAGGCTTC 8421 Query 2175366 TCGACATAGGCGCGCATGAC 2175385 |||| ||| |||||||||| Sbjct 8420 TCGAAGTAGACGCGCATGAC 8401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915745801315934