Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933315.1_202017-01-04] 4,706 sequences; 39,039,515 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq182 338 7e-88 seq120 131 2e-25 seq3491 127 2e-24 seq1131 127 2e-24 seq413 125 8e-24 seq162 120 3e-22 seq31 111 2e-19 >seq182 Length=41727 Score = 338 bits (374), Expect = 7e-88 Identities = 1139/1748 (65%), Gaps = 54/1748 (3%) Strand=Plus/Plus Query 80036 GCGTCCGCAGAT--AGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCAT 80093 |||||||| || ||||||||||||||||||| |||||||||||| |||| | |||||| Sbjct 19178 GCGTCCGCGCATGTAGTACATGCCCGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCAT 19237 Query 80094 AGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACA 80153 || | ||||| || || |||| | ||| |||||||| ||||| ||| || Sbjct 19238 GGACGTCAGCTTGCTAATCGTCGGGTCGGCAATGTGAATGTTCAGCGACTGGCTCTGGCA 19297 Query 80154 GATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATAC 80213 ||| | || ||||| || |||| || || | | | ||| || || ||||| || Sbjct 19298 AATGTAGGCGCCACGGTCCGCCGACAGGTCCAACACGGCCTTCTGCTTGATCTCCCACAC 19357 Query 80214 TGTACGATACACCTTACGAAGCTCCTCTGGAATG---TCCAGATTTTGCACACTGCCACC 80270 || ||| || | || || |||||| | || || ||||| |||||| Sbjct 19358 CGTCTTGTACTTCTCCTTGACCTGGTCCGGAATGGATTTCACCTTCTGCACGGAGCCACC 19417 Query 80271 GTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTT 80330 ||| | ||| || || || |||| |||||||| || |||| | ||| || || Sbjct 19418 GTCAGCCAGAATCTGGTTGCGCACCTCAGGCGTCCAGATGCCCAGCTCGATCAGCTCCTT 19477 Query 80331 CACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTT 80390 || |||| |||||| | || ||||| || || || ||| || |||| ||| Sbjct 19478 CATGAGGTACTTGTTCACGATCGTGAACTCACCAGCCAGCACGCGGCGGTTGTACATGTT 19537 Query 80391 TGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGG 80450 | ||||| ||||| | | ||| ||||| || | ||||||||||| ||| || || Sbjct 19538 CGACGTGTACGGCTCGATGGACTCATTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGG 19597 Query 80451 CATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCT---TCTTGATATCCT--CGCGC 80505 |||||| | || | || || || || | |||||||| || | | |||| |||| Sbjct 19598 CATCGGAGCCACGAGGAGCGAGTTGCGGATGCCGTGCTTGATCACGTTCTCCTTGAGCGC 19657 Query 80506 A----AATCTGACCAAAAATCAACCCCA--ACGCTGTGA--CCCCACATGTCGTGCTGCA 80557 | |||| ||| | | ||| | ||| |||| |||||||||||| ||| | Sbjct 19658 AGCCCAATC---CCACA----AGCCCGAAGACGGGGTGACGCCCCACATGTCGAACTGGA 19710 Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617 |||| |||| || || || ||| ||||||||||||||||||| | |||||| | Sbjct 19711 AGATACCCTTGCTGGCAGGCGATCCCTGGAACGTCTCGTACGGGCCCAGCTCCTTGGCGA 19770 Query 80618 GCTCACACGA---CTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA 80674 ||| ||| ||||||| | |||| || || ||| |||| | | |||| | Sbjct 19771 TCTCCATCGAGGTCTCCATA---GAAGCGTAGTAGATCGTCTCGAAGATGTTCATGTTGA 19827 Query 80675 CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGC 80734 | || || || ||| ||||||| || ||| | || || | || || || | Sbjct 19828 GTTCACGGGCTTGCGGGCTCTCGAACGCATAGTTCATGAGGATAAATGCATCCGCGAGAC 19887 Query 80735 CCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA-TCGCTCGGCCTCCGGAATT 80793 |||| ||||| || | | ||||||||||||| |||| || | || | |||||| | Sbjct 19888 CCTGGACGCCAATACCAACCGGGCGGTGGCGCATGTTGGACTTGCGC-GCCTCCTCCACG 19946 Query 80794 GGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCA 80853 ||||| |||| || ||||| ||||| ||| || || || ||| || || || Sbjct 19947 GGGTAGTAGTTGACGTCAATGACCTTGTTCAAGTTCCGGGTCACCACCTTGGTCACCTCG 20006 Query 80854 TGAAGTTTCTGAAAGTCGAATTGGTTCC--CCTTCACAAATGCCGGAAGGCTCAGGGACG 80911 | || ||||| ||| ||| ||| ||| |||||| || ||| || |||| Sbjct 20007 TACAGCTTCTGGTAGTTGAA--CACTCCATCCTCCACAAACTTGGGGAGGGCCACAGACG 20064 Query 80912 CCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAAT 80971 |||| |||||||| |||||||| || | || |||| | || || |||||| | Sbjct 20065 CCAGGTTGCACACCGCCACCTCATCGGGCGACGTGTACTCCATAATCTCGCAGCACAAGT 20124 Query 80972 TAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT 81031 | || || || || ||||| | |||||| |||||| |||| |||||||||| Sbjct 20125 TGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGT 20184 Query 81032 AGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGC 81091 | |||| |||| || ||||| | ||| | | ||||||||| ||| | || Sbjct 20185 ACAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGCGAACCACAGCTGCT 20244 Query 81092 GCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCG 81150 | || |||| | |||||| || || | | ||||| |||| || || ||| Sbjct 20245 GGGCATTGATCGTCTTGCGCGCGCGCCCCTCCTTCTCGTACTTCTCGTACAGAGTC-TCG 20303 Query 81151 AACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAG 81210 |||| | | || || ||| | ||| ||| || ||||| | ||| ||| Sbjct 20304 AACTCGTCGCCCCAGCACTCGTAGAGTCCGGGGGCCTCATTGGGGCAGAAAAGGCTCCAC 20363 Query 81211 TCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAAC 81267 | || ||||| || ||| ||||||||| || |||| ||| || ||| ||| Sbjct 20364 T---TGCCGTTCGCTTCCACACGCTTCATGAACAGATCGGGGACCCACAGAGCGTAGAAG 20420 Query 81268 AGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATG 81327 |||||||| ||| | ||| | || ||||| ||||| ||| || || || | Sbjct 20421 AGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGCTCCAGGAACTCGAAC 20480 Query 81328 ATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCC 81384 | ||| || ||||| |||||||| || | ||||| ||| || ||||| | || ||| Sbjct 20481 ACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAACGAGCCTTTGCGCTTGCCTCCTCCC 20540 Query 81385 TGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGAC 81444 |||| || || ||||| || | || || || | || ||| |||||||| || | || Sbjct 20541 TGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGT-TGGA 20599 Query 81445 TGA-CCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACC 81503 ||| |||||||| || ||| | ||||||| | ||| || || || Sbjct 20600 TGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCATACTAATGCC 20659 Query 81504 GATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTC 81563 || || || | |||||| || || || ||| | || | || || ||||| ||||| Sbjct 20660 AATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCCCTC 20719 Query 81564 GATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCC 81623 || || | | |||| | |||| |||||| |||| ||| || | | ||| Sbjct 20720 AATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGTGCC 20779 Query 81624 GGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC-GGTTTGACATCAGGTCATAGG 81682 ||| || || || || || |||||||| | ||| ||| | |||||| || ||||| | Sbjct 20780 GGCGTTAAAGAGCGTGGGCGTCGCGTGCGT-AAAGAACATCTGTGACATGAGCTCATACG 20838 Query 81683 T-TTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATG 81741 | | | || ||| ||| || || | ||||||||| | || || ||||| | ||| Sbjct 20839 TGTGCAGTGCCGCCTGG-ATGTCTTGCTTGTGAATACCCAGCGCCACGCGCATGATCATC 20897 Query 81742 TACTGGGG 81749 | |||||| Sbjct 20898 TGCTGGGG 20905 >seq120 Length=50941 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||| | || |||||||| || || || || || ||| | Sbjct 31067 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 31126 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||| | || ||||| ||||| || ||||||||||| || || || |||||| Sbjct 31127 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 31186 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || || || ||||| || ||||| | ||| || || ||| ||||| || Sbjct 31187 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACAA 31245 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || || || || | || ||||||||||||| ||| Sbjct 31246 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTTCGCGGCGGA 31294 Score = 125 bits (138), Expect = 8e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||| | || |||||||| || || || || || ||| | Sbjct 30839 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 30898 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||| | || ||||| ||||| || ||||||||||| || || || |||||| Sbjct 30899 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 30958 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || || || ||||| || ||||| | ||| || || ||| ||||| || Sbjct 30959 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACAA 31017 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || ||||||| || ||||| Sbjct 31018 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 31065 >seq3491 Length=1496 Score = 127 bits (140), Expect = 2e-24 Identities = 351/533 (66%), Gaps = 5/533 (1%) Strand=Plus/Plus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||| || || |||||||||| ||||||| | || || | Sbjct 418 TGTGGCAGATGTACAAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCTGG 477 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTTCATCAAGTTG 64437 | || || | ||||||| ||||| | | ||| || | |||||||||||| Sbjct 478 TGCACGACCTGAAGGACTGGGGGAACCTGA-CGGACAACGAGCGCCACTTCATCAAGCAC 536 Query 64438 GTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTT 64497 || |||||||||||||| | || ||||| || ||| ||||| ||| | || || Sbjct 537 GTGCTAGCATTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCGATGAACTTC 596 Query 64498 ACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAA 64557 | || || || || | || ||||| || | ||||| | | ||| | ||| Sbjct 597 AGCAATGAGGTGCAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATCGAG 656 Query 64558 AGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAG 64617 | || || ||| ||| ||||| |||| |||| || | ||| | || ||| Sbjct 657 AACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTGGAG 716 Query 64618 AAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGG 64677 |||||| || | | || || ||||| | || || || ||||| ||| Sbjct 717 AAGGATCACTTGCTGCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGCTGG 776 Query 64678 GCCATCCGGTGGA-TGAA--TCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCC 64734 || || |||| ||| ||||| ||||| | ||||||| || || ||| Sbjct 777 GCGCTCAAGTGGTGTGACCCTCGTGTTTCGTCCTACCCGGAGCGTCTGCTGGCGTTCGCC 836 Query 64735 TGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGG 64794 ||||| || |||||||| || || || ||||| || || |||||||| || ||||| Sbjct 837 GCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGC 896 Query 64795 GGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| ||||| |||||| || ||||||||||| ||| ||||||||||| Sbjct 897 GGCCTCATGCCTGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGGGACGAGGG 949 >seq1131 Length=8162 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| || || |||||||| || || || || || ||| | Sbjct 4580 ATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTAGAGCCG 4521 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || ||||||| ||| | ||| ||||| ||||||||||| || ||||| || ||| Sbjct 4520 TCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGAC 4461 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || || || || ||||| |||||||| | || || || | ||||| Sbjct 4460 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTAC 4401 Query 27583 AATGTCCAAAAGG 27595 || |||| |||| Sbjct 4400 AACATCCAGAAGG 4388 >seq413 Length=24995 Score = 125 bits (138), Expect = 8e-24 Identities = 210/302 (70%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 31950 TGAAGATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAA 32009 || ||||| | |||| || | || |||| |||||||| ||| || ||||| || Sbjct 13067 TGCAGATAACCAGCGATCGCTGCCCTCGGTGGTTGACGGCCTGAAGATCTCGCAGCGTAA 13126 Query 32010 GGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTC 32069 |||| | | ||| ||||| || || || |||| || | |||||||| |||||| | Sbjct 13127 GGTGCTTTTCGCATGCCTGAAACGTAAGCTAACGAGCGAGGTTAAGGTGGCACAGCTGGC 13186 Query 32070 GGGCTACGTGGCAG--AGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACC 32127 ||||||| |||| |||| ||||| || ||||| ||||| || || || || || Sbjct 13187 GGGCTACT--GCAGTGAGCATACGGCTTACCACCATGGCGAAGCTTCACTGCACTCGACG 13244 Query 32128 ATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCT 32187 ||||||||| | || ||| | || || || | || ||||| | | | || || Sbjct 13245 ATTGTCAACATGGCGCAGGATTTCGTGGGATCCAACAACCTTCCGCTGTTGTATCCTTCA 13304 Query 32188 GGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTC 32247 || || || || ||||| || || ||||||||||| || ||| | |||||||||||| Sbjct 13305 GGTCAATTCGGTACCCGTCTGCAAGGAGGCAAGGATGCCGCTAGCCCTCGTTACATCTTC 13364 Query 32248 AC 32249 || Sbjct 13365 AC 13366 >seq162 Length=44331 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || |||||||| || || | || || ||| | Sbjct 11672 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 11613 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| ||||||||||||||||| || || || || |||||| Sbjct 11612 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 11553 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| ||||| ||||| || || || | || || || ||| ||||| || Sbjct 11552 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC-GACTACAA 11494 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || || || || || ||||||| || || || Sbjct 11493 CATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 11446 Score = 100 bits (110), Expect = 3e-16 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 ||||| ||||||||||||||||| || || || || ||||||||||| || ||||| | Sbjct 11824 TGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCCTGATTTTCG 11765 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCC 27600 |||| ||||| || || || | || || || ||| ||||| || |||| ||||| || Sbjct 11764 CTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC-GACTACAACATCCAGAAGGAGTCT 11706 Query 27601 ACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || || || ||||||| || || || Sbjct 11705 ACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 11674 >seq31 Length=84190 Score = 111 bits (122), Expect = 2e-19 Identities = 258/386 (67%), Gaps = 15/386 (4%) Strand=Plus/Minus Query 24723 TTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAG 24782 || || || ||| |||||| || | || ||||| ||||| | || |||||| || Sbjct 41977 TTCTACCAAGCGTCTACGAGCGAATTATTCGGCAAAGTGCAAGCCACCCCACAGGATGAA 41918 Query 24783 ACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATA 24842 ||| || || | ||||| ||||| || || | ||| ||| |||| |||| Sbjct 41917 GACACGCCGTTCCACCCGCGCTCACCGTACGGTGTAGCGAAGCAGTTTGCGTTTTGGAGT 41858 Query 24843 ACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCAACCAT 24902 |||| |||| || ||| | ||||| || || ||||| |||||||||||||| Sbjct 41857 GTGGTGAACCACCGAGAAGCCTACGGGATGTACGCCGTGAACGGGATTCTGTTCAACCAC 41798 Query 24903 GAGTCGGAGCGTCGGGGACCTGAATTTGTTACACGAAAGATTACTCTTG--GTATTGACC 24960 ||| ||| || ||||| || || || || ||||| || | || || || | Sbjct 41797 GAGAGTCCGCGACGCGGACCAACCTTCGTGACCCGCAAGATCACGCGTGCGGTGGTGCGC 41738 Query 24961 ATT-------GGATCAAGACAAGGGCACCTATTGAGCTGGGAAACCTAGATGCCAAACGT 25013 ||| |||| ||| | || || ||| |||| ||||| |||||||| ||| Sbjct 41737 ATTCGTGCGGGGATTGAGAG--GTGCCTCT-TTG---TGGGCAACCTGGATGCCAAGCGT 41684 Query 25014 GATTGGGGGCATGCAGCCGACTACGTCGACGCCATGTGGCGCATGCTCCAACAGAATAAG 25073 || ||||| || || ||||| || || ||||||||||||||| ||||| | | | Sbjct 41683 GACTGGGGCCACGCCCGTGACTATGTGGAATGCATGTGGCGCATGCTTCAACACGACACG 41624 Query 25074 CCAGAGGATTTTGTGATCGGCACCGG 25099 ||| |||||||||| | | |||||| Sbjct 41623 CCACAGGATTTTGTTGTTGCCACCGG 41598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570276851490720