Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933335.1_202017-01-04] 4,449 sequences; 38,872,710 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1193 84.2 2e-11 >seq1193 Length=7772 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | |||| || |||||||| |||||||||||||| || || || ||| Sbjct 4042 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCCTGGATT 4101 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 || || |||| || | | ||||||| | ||| || || || || | || ||||| Sbjct 4102 TTCTGCTTGACATTGTCAATGCTGTCGGACGGCTCTACGTCCAGCGTGATGGTCTTGCCC 4161 Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || ||||| || ||||| Sbjct 4162 GTCAGGGTCTTCACAAAGATCTGCAT 4187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451978062972040