Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933335.1_202017-01-04] 4,449 sequences; 38,872,710 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq917 215 8e-50 seq174 208 1e-47 seq448 194 3e-43 seq50 161 2e-33 seq73 143 4e-28 seq114 136 6e-26 seq145 114 2e-19 seq447 104 4e-16 seq856 98.7 2e-14 seq520 98.7 2e-14 seq369 96.9 5e-14 seq33 96.9 5e-14 seq1089 93.3 7e-13 seq673 86.0 1e-10 >seq917 Length=11559 Score = 215 bits (238), Expect = 8e-50 Identities = 337/480 (70%), Gaps = 4/480 (1%) Strand=Plus/Plus Query 2018916 CCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCC 2018975 |||||| | || |||||||| ||| |||| | ||| | ||||||||| || | Sbjct 6996 CCGTGGGTGGAGAAGTACCGGCCGCGCATGCTGGCGGACGTGGTGGGCAACCGCGACACG 7055 Query 2018976 GTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGC 2019035 | || || |||| |||| | ||||||||| | |||||| | ||| ||||| Sbjct 7056 ATCGCGAGTCTGCAGGCTATGGCGCAAGCGGGCAACATGACGAACCTCATCCTGTCGGGC 7115 Query 2019036 CCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCG 2019095 ||||| || ||||| |||||||| |||||| ||| ||||||||| || | ||| | Sbjct 7116 CCGCCGGGAACGGGGAAGACCACCAGCATCCTGTGTTTGGCGCGCGAACTGCTAGGCACC 7175 Query 2019096 GCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTG 2019155 | | | |||||||||| || ||||| ||||| ||||| |||||| | ||| ||| Sbjct 7176 AGTGTCAAACAGGCCGTGCTGGAGCTCAACGCGTCTGACGACCGCGGCATCGACACGGTG 7235 Query 2019156 CGTAGAATCATCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACA 2019213 || | | |||||| | ||| | ||| | || || || || |||||||||| Sbjct 7236 CGCACGAAGATCAAGATGTTTGCGCAGCAAAAGGTGACG--CTACCCCCGGGCCGCCACA 7293 Query 2019214 AGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGAT 2019273 || | | ||||| || || ||||||| | || | |||||||| ||||| || || Sbjct 7294 AGATTGTGATCCTGGACGAAGCCGACTCGATGACAGCCGCGGCCCAACAGGCGCTGCGCC 7353 Query 2019274 CGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGA 2019333 |||||||| | | | | ||| ||| |||| |||||||||||||||| ||| | | Sbjct 7354 GCACCATGGAGATCTTCTCGGCCACCACGAGGTTCGCGCTGGCCTGCAACAACTCGACTA 7413 Query 2019334 TGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACG 2019393 | ||||||| || |||||||||| ||||||||| | ||||| ||||||| |||||| Sbjct 7414 AGATCATCGAGCCCATCCAGAGCCGCTGCGCCATCCTCCGCTTCACGCGCCTACCCGACG 7473 >seq174 Length=41958 Score = 208 bits (230), Expect = 1e-47 Identities = 350/505 (69%), Gaps = 15/505 (3%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| |||||||| |||||||| || ||||| | |||||||| | | |||||||| Sbjct 21188 CTGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGTTGGA 21129 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| ||||| | |||| | || |||||| | |||||| | || ||| Sbjct 21128 TGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCATGCTAATGCC 21069 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || |||||| |||||||||| |||||||| || ||||| ||||| |||||||| Sbjct 21068 AATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCCCTC 21009 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||||||||| ||| |||| ||| ||| || |||||||| ||||| |||| |||||| Sbjct 21008 AATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGTGCC 20949 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||| || ||||||||||||||||| ||| | || || |||||| ||| || || Sbjct 20948 GGCGTTAAAGAGCGTGGGCGTCGCGTGCGTAAAGAACATCTGTGACATGAGCTCATACGT 20889 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | ||| |||| | |||||| | | | | ||||| || || || Sbjct 20888 ---GTGCAGTGCCGCCTGGATGTCTTG--CTTGTGAATACCCA-----GC-----GCCAC 20844 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959 |||||||||||| | |||||| ||||| ||||| || ||| | |||||| Sbjct 20843 GCGCATGATCATCTGCTGGGGGCGCTCCACGACCTTTCCGTTCACGCGGAAGAGGTAGCC 20784 Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019 ||| || ||| | ||| ||||| ||| | | ||| || |||||| |||||| Sbjct 20783 CCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTCCCGGTCGTGGATGATGGC 20724 Query 2074020 GGCGTCGAGGGCCTCCTTGTGCGCC 2074044 | || || | ||||||||| || Sbjct 20723 CGAGTTAAGCTCGTCCTTGTGCTCC 20699 Score = 154 bits (170), Expect = 2e-31 Identities = 288/429 (67%), Gaps = 0/429 (0%) Strand=Plus/Minus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643 |||| ||||| |||| ||| | ||||| |||||||||||||| | |||| Sbjct 21617 CTCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTT 21558 Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703 | | |||||||||| ||||||| | ||| | |||||||| |||||||| | |||||| Sbjct 21557 GGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGC 21498 Query 2071704 CGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNN 2071763 |||| | || | || | || | | |||||| |||| Sbjct 21497 GAACCACAGCTGCTGGGCATTGATCGTCTTGCGCGCGCGCCCCTCCTTCTCGTACTTCTC 21438 Query 2071764 NNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCA 2071823 | || | || || || |||| |||||||| || ||||| ||||| ||||| Sbjct 21437 GTACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCCGGGGGCCTCATTGGGGCA 21378 Query 2071824 AAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAG 2071883 || || ||| | |||| | |||| || ||| ||||| ||| |||||| Sbjct 21377 GAAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAACAGATCGGGGACCCACAG 21318 Query 2071884 GCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAG 2071943 |||| ||||| |||||||| |||| | ||| |||||||||||||| ||| || || Sbjct 21317 AGCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGCTCCAG 21258 Query 2071944 CCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTT 2072003 | |||| | ||| ||||||||||||||||||||| ||| || | ||| |||||||| Sbjct 21257 GAACTCGAACACGTCAGCGTGCCACGGCTCCAGGTAGATGGCGAACGAGCCTTTGCGCTT 21198 Query 2072004 GCCGCCGCC 2072012 ||| || || Sbjct 21197 GCCTCCTCC 21189 >seq448 Length=24230 Score = 194 bits (214), Expect = 3e-43 Identities = 190/243 (78%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || ||||||| ||||||||||||||| |||||| |||||||||||||||| ||| Sbjct 1051 ACACCAGCCTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGC 1110 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG----CACCC 794008 ||||||| |||||||| ||||||||| | ||| || || ||| | ||||| Sbjct 1111 GAGATCATATCCATCCAGTCGAACGGGTT---CTTCACGTTGTAGATCTTGGATGCACCC 1167 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 || || |||||||||||||| ||||| || ||||||||||||||||| || | ||| Sbjct 1168 -AGTGAGTACAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTT 1226 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 ||||||||| ||| ||||||| ||||| ||||| || ||||| | ||| ||| | || || Sbjct 1227 CATGCCGATCAGCTCCACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGC 1286 Query 794129 CTC 794131 || Sbjct 1287 GTC 1289 Score = 192 bits (212), Expect = 9e-43 Identities = 240/327 (73%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||| | ||||| |||| || || |||||||||||||||||| Sbjct 1372 CCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGGCATGAGGCCGCGCTTC 1431 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||||| |||||||| || |||||||| |||||||| || Sbjct 1432 TTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCCCTCCACGGCGGCGAAC 1491 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || ||||| | | | | | | | || |||||| | |||||| Sbjct 1492 GCCAGCAGACGCTCCGGGTAGGA--CGAAACACGAGG-GTCACACCACTTGAGCGCCCAG 1548 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 ||||| ||| ||| | || | ||| |||||||| || | | ||| |||||||| Sbjct 1549 CGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCAAGTGATCCTTCTCC 1608 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 || | |||||||| ||| |||||||| || |||||||| ||| ||||||||||| ||| Sbjct 1609 ACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTCCGAGTGGATGTTCTCG 1668 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||||||||| || |||||| Sbjct 1669 ATGGCGATCTGGAAGCCGTAGAAGCAG 1695 Score = 158 bits (174), Expect = 2e-32 Identities = 190/254 (75%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || ||||| ||||| || ||||| ||||||||||| |||||||||| Sbjct 1699 GCCTCCGGCACTTGCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCG 1758 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||||| ||||| || || || ||||||||||| ||||| ||||||| ||| | || Sbjct 1759 TCGCTGGCAGCGAAGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGG 1818 Query 796270 GAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 |||||| | |||| || || ||||| | ||||||||| ||||| || || || Sbjct 1819 TTCCCCCAGTCCTTCAGGTCGTGCACC-AGGTCCAGCTCCTCGGCCGTCCAGAACGACGC 1877 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGGAACAGAACAAAG 796386 ||| ||||| |||||||||| ||| | ||| || | |||| |||||||| || || Sbjct 1878 CTCCGCCTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGGAACAGCACGAAC 1935 Query 796387 CGATTGGGGTTCTC 796400 || || |||||||| Sbjct 1936 CGGTTCGGGTTCTC 1949 >seq50 Length=67630 Score = 161 bits (178), Expect = 2e-33 Identities = 191/259 (74%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||| || |||||||| || ||||| || ||||||||| ||||||| || || | | Sbjct 34454 TGAACTTAGTCACGGCCTTCGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCACCCGGGA 34395 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||||||||| ||||||||||| ||| || | ||| |||||| | Sbjct 34394 GCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACAGCGTCGACTTCTTGTTGTAAC 34335 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||| ||||||||| | | |||| || |||| || ||||||| |||||||||| Sbjct 34334 GCGACAGCTTGCCGGCCTCCGAGGCGATACGCTCGAAGATATCGTTGATGAACGAGTTCA 34275 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| ||| ||||||| |||||||||||||| |||||||||| Sbjct 34274 TGATCGACATACCGCGCTTGCTGATGCCCGTCTCGGGGTGCACCTGGCGCAGCACCTTGT 34215 Query 1485710 AAACAAAGGACGAGTACGA 1485728 | | ||| ||||||||| Sbjct 34214 AGATGTAGGTCGAGTACGA 34196 >seq73 Length=59049 Score = 143 bits (158), Expect = 4e-28 Identities = 224/318 (70%), Gaps = 2/318 (1%) Strand=Plus/Minus Query 118582 CGCCCAGGAGGACGCGCGTGACCGTGTTTGACCCGTTCTTGCGCACGCCGCGCATGCACA 118641 ||||||| | | || |||||| ||| | | ||| |||| |||||||||||| || Sbjct 19107 CGCCCAGCACGGAGCTCGTGACGGTGCTGGCGCCGCTCTTCTCGACGCCGCGCATGACCA 19048 Query 118642 CGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCGCGCCCG-TGACCTCGCTG 118700 |||||||||| | |||||| ||| ||| | ||||| | | || | |||| | || Sbjct 19047 TGCACATGTGGGTGGCCTCGATCACAACGGCCACGCC-CTTGGGCTCAATGACGCCCATG 18989 Query 118701 ATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATG 118760 ||| ||||||||| ||||| |||||||||||| | ||| ||| | | Sbjct 18988 ATGGCGGTGGCGATCTGCTTGGTGAGGCGCTCCTGCACCTGCAGACGGCGCGAAAAGACC 18929 Query 118761 TCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACG 118820 ||| | ||||| || |||||| ||||| | | |||| ||| | ||| || | | Sbjct 18928 TCGCTCACGCGCGCGAGCTTGCTGAGGCCCAGCACTTTGCCGTTGGGGATGTAACCGATG 18869 Query 118821 TGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCG 118880 ||| ||||||| | || |||| || |||||||||||||||||| | | ||| ||||| Sbjct 18868 TGCACCTTGCCCGTGAACGGCACCATGTGGTGCTCGCACATGGAGTACAGGTCGATGTCC 18809 Query 118881 CGCACGGTCACCATCTCG 118898 |||||| | ||||||||| Sbjct 18808 CGCACGATGACCATCTCG 18791 >seq114 Length=50870 Score = 136 bits (150), Expect = 6e-26 Identities = 175/238 (74%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 1217382 GACCGACCCATTGTGCACCGCGACCTCAAGAGCAGCAACCTGTTGGTCGACGACAATTTC 1217441 || || || ||| ||||||| |||||||||||| |||| ||||||| ||| | || || Sbjct 6098 GAGCGGCCGATTCTGCACCGAGACCTCAAGAGCCCCAACTTGTTGGTGGACAAGAACTTT 6157 Query 1217442 ACGATCAAGGTGGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGC-GACGATGAC 1217500 | || ||| || | ||||||||| | |||||| || | || ||| ||| ||||| Sbjct 6158 AACATTAAGTTGTCAGACTTTGGCCTGGCCCGCGTCAAGGCTCAC-GTGCAGACCATGAC 6216 Query 1217501 ---CCGGTGCGGCACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCGAGCGCTACTC 1217557 | ||||||||| ||||| |||||||||| | ||| || | || ||| | Sbjct 6217 GGGCAACTGCGGCACGGTCCAGTGGATGGCGCCCGAGGTGCTGGGCAACCAGAAGTACAC 6276 Query 1217558 GGAAAAGGCCGACATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCACGCGCAAG 1217615 ||| ||||||||| ||| ||| ||||| |||||||| ||||||||| ||||| || || Sbjct 6277 GGAGAAGGCCGACGTCTTCTCGTTCGGGATCGTCATCTGGGAGATCGTCACGGGCGAG 6334 >seq145 Length=45044 Score = 114 bits (126), Expect = 2e-19 Identities = 289/431 (67%), Gaps = 20/431 (5%) Strand=Plus/Minus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 ||||| |||||||||| || || || || |||| | ||| | || | || |||| Sbjct 24061 TGCCGCCGGTGCCGTTCTTGAAGCCCACAGGCATGGACAGGCCACTCGTGAGCTCACGGT 24002 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAAT 2175195 ||| |||| |||||| ||||| ||||| | || ||||||| ||| ||||| ||| Sbjct 24001 GCAGCTGGGACTCGGTCGTGCGAGCGCCAATAGCCCCCCACGACACCAGGTCGGCCGTGA 23942 Query 2175196 AGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACCA 2175255 | ||| | | | | ||||||| | ||||||| || | || || || Sbjct 23941 ACTGCGGTGAGATGGTGTCCAAGAACTCGAGACTCACGGGCAACCCCAG--CG-CGTTCA 23885 Query 2175256 GGTCGCGCAGCAGTCGACG--CGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTC 2175313 ||| |||||||| || ||||| || | ||| | | |||| | ||| ||| Sbjct 23884 CGTCCAGCAGCAGTTTGCGTGCGATGCGG--ATGCCCTTGTTGATGCGGAAGGACTGGTC 23827 Query 2175314 GAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATA 2175373 ||||| |||||| || || |||||||| |||||||||||||||||||| |||| || Sbjct 23826 CAGGTCCGGGTCGTTGATGAGTCCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCGAAGTA 23767 Query 2175374 GGCGCGCATGACCACCAGGAGAGCGTCGCCGACCT-CTGTCTCGGCAA----AGGTGCGC 2175428 | |||||||| ||||| || || || ||| || ||| | || | ||| |||| Sbjct 23766 CGTGCGCATGATGACCAGCAGCTCGCCGTCGAGCTCCTGGGCCAGCGACTGGAGGCGCGC 23707 Query 2175429 AGCCGTCGGCCATACTCGACGATGGCCTGGGGATCGTGCGCCGAACACGGACCGACGACC 2175488 || ||| | |||| | || |||| | ||||| || ||||| || |||||| Sbjct 23706 AG-CGTAGTCCAT----GGCGGCGGCCACG---TCGTGGATGGAGCACGGGCCCACGACC 23655 Query 2175489 ACCAAGAGACG 2175499 |||| ||| || Sbjct 23654 ACCACGAGGCG 23644 >seq447 Length=24261 Score = 104 bits (114), Expect = 4e-16 Identities = 115/150 (77%), Gaps = 4/150 (3%) Strand=Plus/Minus Query 679834 AGCCCATCGAGCGAGCGGATGCGCGACAGCGCCACGTAGGCCTGGCCACAGTCAAAGATG 679893 ||||| || |||||||| | ||| ||||| ||||| |||||||||||| | || || | | Sbjct 5078 AGCCCTTCCAGCGAGCGCACGCGGGACAGTGCCACATAGGCCTGGCCAAACTCGAACACG 5019 Query 679894 C-CG-CTCATCGAGATGACAGCGCGGTCCAACGACATGCCCTGGCACTTGTGGATGGTCA 679951 | || | ||| | |||||| ||| ||||||| ||||||| |||||||||| | | Sbjct 5018 CGCGACAGATC--CAACACAGCGGCGTCGAACGACAGTCCCTGGCTCTTGTGGATGCTGA 4961 Query 679952 TGGCCCACGCCAGCAGCAGTGGCACCTGCC 679981 ||||||| |||||| || |||| ||||| Sbjct 4960 TGGCCCAGGCCAGCGCCAACGGCAGCTGCC 4931 >seq856 Length=12620 Score = 98.7 bits (108), Expect = 2e-14 Identities = 161/227 (71%), Gaps = 14/227 (6%) Strand=Plus/Plus Query 1249584 TGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAACCTGCTGGTCG 1249643 ||||| || | || ||| || | ||||||||||||||| || ||| | ||| || Sbjct 10830 TGCACTCGTTGGAGCCGGTGGTGCTGCACCGCGATCTCAAGTCCATGAACATCCTGCTCA 10889 Query 1249644 AC---GACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCATCCGCGAGGACA 1249700 || |||| | | || |||| | | ||||||||| || |||||| | ||| Sbjct 10890 ACTCGGACGGGGA---TGCCAAGCTCACGGACTTTGGTGTCTCGCGCAAATG----GACG 10942 Query 1249701 ATGC-CACCATGACG--CGGTGCGG-CACGCCGGCGTGGACGGCGCCCGAGGTCATCCGC 1249756 || |||||||||| ||| | || ||||| | ||||| ||||||||||||||| Sbjct 10943 GTGGACACCATGACGGCCGGCGTGGGCACGCGGCGGTGGATGGCGCCCGAGGTCATGATG 11002 Query 1249757 GGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 ||| ||||||||||| |||||||| ||| |||| ||||| |||| Sbjct 11003 GGCAAGCGCTACGACACAAGCGCCGACATCTTCTCGTTCGGCGTCGT 11049 Score = 86.0 bits (94), Expect = 1e-10 Identities = 170/244 (70%), Gaps = 21/244 (9%) Strand=Plus/Plus Query 1249571 GGCGTCG-CCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAG---AG 1249626 ||||| | |||| || ||| |||||||||| || | |||||||| |||||| || Sbjct 8623 GGCGTTGACCTACCTCCACTCGCTCGACCCCAAGGTGCTGCACCGCGACCTCAAGTCGAG 8682 Query 1249627 CAGCAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCG 1249686 | || | ||||| ||| | ||| ||| |||| | | |||||||| |||| || Sbjct 8683 GAACATCTTGCTG-TCGCC--CGAACTGGATGCCAAGCTCTCGGACTTTGGGGTCGCCCG 8739 Query 1249687 CATCCGCGAGGACAA-TGC--CACCATGAC----GCGGTGCGGCACGCCGGCGTGGACGG 1249739 || | ||| | | || |||||| | |||| |||||| || |||| || Sbjct 8740 CA------AATACACCTTCAGCAGCATGACCGCAGGGGTG-GGCACGTCGCTCTGGATGG 8792 Query 1249740 CGCCCGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCA 1249799 | ||||||||||| | |||||| || ||||||| |||||||| ||| |||| ||||| Sbjct 8793 CCCCCGAGGTCATGCTCGGCGACCGGTACGACGCCAGCGCCGACATCTTCTCGTTCGGCG 8852 Query 1249800 TCGT 1249803 |||| Sbjct 8853 TCGT 8856 >seq520 Length=21887 Score = 98.7 bits (108), Expect = 2e-14 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 2035628 CCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGG 2035687 ||| || ||| | ||||| |||||||||||| | ||||||||| ||| || || |||| Sbjct 16965 CCTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGAGCCTGCTGGACTTGGC 17024 Query 2035688 GTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTT 2035747 |||| | ||||||| | | || ||||| ||| ||||| |||| |||||| |||| || Sbjct 17025 GTGCGCTAAGGTGGCCAGCATGATTAAGGGAAAGACGCCCCAGGAGATCCGCGAGACGTT 17084 Query 2035748 TAACATC 2035754 |||||| Sbjct 17085 CAACATC 17091 >seq369 Length=27430 Score = 96.9 bits (106), Expect = 5e-14 Identities = 170/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 1217358 GGCG-TGGCCTATTTGCACGGGCGCGA-CCGACCCATTGTGCACCGCGACCTCAAGAGCA 1217415 |||| |||| ||| ||||||| ||| | |||| || | ||||||||||||||| Sbjct 7992 GGCGCTGGCGTATCTGCACGGCCGCCAGCCGATT-ATCATCCACCGCGACCTCAAGTCGC 8050 Query 1217416 GCAACCTGTTGGTCGACGACAATTTCACGATC-AAGGTGGCCGACTTTGGCTTTGCCCGC 1217474 |||| || || ||||| || | || | ||| | ||||||||| | |||| Sbjct 8051 TCAACGTGCTGCTCGACAACCGGCTG-CGTGCGAAGCTCAGCGACTTTGGGCTCAGCCGC 8109 Query 1217475 ATCCGCGAGGACAATGCGACGATGACC--CGGTGCGG-CACGCCGGCGTGGACGGCGCCC 1217531 ||| || | | | ||||||||| ||| | || ||||| | ||||||||||||| Sbjct 8110 GAGCGCTCGGCCGACGACACGATGACCAACGGCGTGGGCACGCTGCTGTGGACGGCGCCC 8169 Query 1217532 GAGATCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGACATCTACTCTTTCGGCATCGT 1217590 |||||||||||||||||| |||| || ||||| ||| | ||||| | || |||||| Sbjct 8170 GAGATCCTGCGCGGCGAGACCTACAGCGAGAAGGCGGACGTGTACTCGTACGCCATCGT 8228 Score = 89.7 bits (98), Expect = 8e-12 Identities = 159/230 (69%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 1249577 GCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAACCTG 1249636 || |||||||||| | | | ||| || |||||||||| |||||| |||| || Sbjct 7999 GCGTATCTGCACGGCCGCCAGCCGATTATCATCCACCGCGACCTCAAGTCGCTCAACGTG 8058 Query 1249637 CTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCATCCGCGAG 1249696 ||| ||||| || | || ||| | ||||||||| ||| ||| ||| | Sbjct 8059 CTGCTCGACAACCGGCTGCGTGCGAAGCTCAGCGACTTTGGGCTCAGCCGCGAGCGCTCG 8118 Query 1249697 GACAATGCCACCATGACG--CGGTGCGG-CACGCCGGCGTGGACGGCGCCCGAGGTCATC 1249753 | | | | ||| ||||| ||| | || ||||| | |||||||||||||||| || | Sbjct 8119 GCCGACGACACGATGACCAACGGCGTGGGCACGCTGCTGTGGACGGCGCCCGAGATCCTG 8178 Query 1249754 CGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 ||||||||| |||| |||| || ||||| |||||| || |||||| Sbjct 8179 CGCGGCGAGACCTACAGCGAGAAGGCGGACGTGTACTCGTACGCCATCGT 8228 >seq33 Length=79964 Score = 96.9 bits (106), Expect = 5e-14 Identities = 171/243 (70%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 1249560 CGGCGGCCACGGGCGTCGCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATC 1249619 || || ||| | || || | || |||||| |||| |||||||| ||| | ||||| |||| Sbjct 75695 CGTCGCCCATGCGC-TCACGTACCTGCACTCGCTGGACCCGCCAGTCCTGCACCGTGATC 75753 Query 1249620 TCAAGAGCAGCAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG-- 1249677 ||||| || ||| | ||| || | ||||| | | ||||| | |||||||| Sbjct 75754 TCAAGTCCAAGAACATCCTGCTCAGCTCCGAGTTGGAAGCGAAGGTCACGGACTTTGGCA 75813 Query 1249678 TCTCGCGCGCATCCGCGAGGACAATGCCACCATGACG--CGGTGC-GGCACGCCGGCGTG 1249734 |||| |||| | | ||||| |||||||| ||||| |||||| || ||| Sbjct 75814 TCTCCCGCGAAA--GGATTGACAAG---ACCATGACTGCCGGTGTAGGCACGTCGCTGTG 75868 Query 1249735 GACGGCGCCCGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGAT 1249794 || |||||||||||| || |||||| | |||||||| |||||| ||| |||| | Sbjct 75869 GATGGCGCCCGAGGTGATGATAGGCGAGAGGTACGACGACAAGGCCGACATCTTCTCGTT 75928 Query 1249795 CGG 1249797 ||| Sbjct 75929 CGG 75931 >seq1089 Length=8955 Score = 93.3 bits (102), Expect = 7e-13 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 1217394 GTGCACCGCGACCTCAAGAGCAGCAACCTGTTGGTCGACGACAATTTCACGATCAAGGTG 1217453 |||||||||||||||||| | ||| || || | || ||| ||| |||| || Sbjct 1690 GTGCACCGCGACCTCAAGTCGAAGAACGTGCTGCTAAACCGCAAGTTCCATGCCAAGCTG 1631 Query 1217454 GCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGCGACGATGAC--CCGGTGCGG-C 1217510 |||||||||| | ||||| | | | ||| | ||||||||| | || | || | Sbjct 1630 AGCGACTTTGGCGTCAGCCGCAAGACCCACGTCAACGAGACGATGACGTCTGGCGTGGGC 1571 Query 1217511 ACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGAC 1217570 |||| | |||||| |||||||||||| | ||| || |||||||| ||||||||| Sbjct 1570 ACGCTGCTGTGGACCGCGCCCGAGATCATTGAGGGCAAGAAGTACTCGGAGAAGGCCGAC 1511 Query 1217571 ATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCACGCGCAAGCAGCC 1217620 ||||| || | || |||| ||| ||||| |||| || ||| ||| Sbjct 1510 ATCTATTCGCTTGGAGTCGTGCTGTCAGAGATGGACACGTGCGAGCCGCC 1461 >seq673 Length=16814 Score = 86.0 bits (94), Expect = 1e-10 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2175306 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 2175365 || ||||||||||| |||||| || ||| |||||||| |||||||| ||||| ||||| Sbjct 7212 GATCCGTCGAGGTCCGGGTCGTTGATCAGACCCTTCCATCCGACGGTGGTGCGAGGCTTC 7153 Query 2175366 TCGACATAGGCGCGCATGAC 2175385 |||| ||| |||||||||| Sbjct 7152 TCGAAGTAGACGCGCATGAC 7133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915773139578111