Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933405.1_202017-01-04] 4,562 sequences; 39,184,277 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq18 221 1e-51 seq187 203 4e-46 seq1057 201 1e-45 seq70 154 2e-31 seq127 132 6e-25 seq673 131 2e-24 seq57 123 3e-22 seq97 122 1e-21 seq231 113 6e-19 seq1159 107 2e-17 seq1004 98.7 1e-14 seq88 96.9 4e-14 seq188 86.0 8e-11 >seq18 Length=94768 Score = 221 bits (244), Expect = 1e-51 Identities = 230/299 (77%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||||||||| ||| | |||| | ||||| Sbjct 1329 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTT 1388 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || |||| |||||||||||| |||||||||||||||||| |||| Sbjct 1389 GCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 1448 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||||||||| ||||||||||||| ||| | || | |||||| Sbjct 1449 AGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAGTCCT 1508 Query 869811 CGGTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 |||| || | ||||||| ||||||||| ||||||| ||| ||||| ||||| ||| Sbjct 1509 TCAGGTCGTGCAC-CAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCTTG 1567 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 ||||||| ||| || | || | |||| ||||| || || || ||||| ||||| || Sbjct 1568 TACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTC 1626 Score = 203 bits (224), Expect = 4e-46 Identities = 242/319 (76%), Gaps = 12/319 (4%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| |||||||||||||||| |||||| |||||||||||||||| ||||||||| Sbjct 734 GCCTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATC 793 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTC-GCATCCGAGCGACGC 868809 | |||||||| ||||||||| | |||||| ||| ||| || || || Sbjct 794 ATATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCC-AGTGAGTA 852 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||||||||||||| || ||||||||||||||||||||||| | | |||||||||||| Sbjct 853 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGAT 912 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACG-A 868928 ||| |||| || ||||| |||||||| ||||| | ||| ||| | || || || ||| | Sbjct 913 CAGCTCCACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTC-ACGCA 971 Query 868929 TGATCTGCCTGGGCACGTCGG----CCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGG 868984 |||| || | ||||| ||| ||| ||||||| || | | ||| ||| | ||| Sbjct 972 CGATC-GC--GTGCACG-CGGCTCTCCGGCAGCTTGTTCACCAACTTCGAGTACATGAGG 1027 Query 868985 CAGGCAAAGTCGCAGTGCA 869003 || || ||||| ||||| Sbjct 1028 CACGCGAAGTCCGTGTGCA 1046 Score = 143 bits (158), Expect = 3e-28 Identities = 200/278 (72%), Gaps = 3/278 (1%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||| | ||||| ||| || || |||||||||||||||||| Sbjct 1049 CCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGGCATGAGGCCGCGCTTC 1108 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||||| |||||||| || |||||||| |||||||| || Sbjct 1109 TTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCCCTCCACGGCGGCGAAC 1168 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 | | || ||||| | || | ||| | | || |||||| | ||||||| Sbjct 1169 GCCAGCAGACGCTCCGGGTAG--GACGAAACAC-GAGGGTCACACCACTTGAGCGCCCAG 1225 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||| ||| ||| |||| | ||| |||||||| || | | ||| ||||| || Sbjct 1226 CGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCAAGTGATCCTTCTCC 1285 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATA 869457 | | |||||||| || ||||||||||| ||||| || Sbjct 1286 ACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTA 1323 >seq187 Length=41780 Score = 203 bits (224), Expect = 4e-46 Identities = 334/480 (70%), Gaps = 15/480 (3%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || ||||| |||||||| || ||||| | |||||||| | || |||||||| Sbjct 20593 CTGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGTTGGA 20652 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||| ||||| | |||| | | |||||| | |||||| || ||| Sbjct 20653 TGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCATACTAATGCC 20712 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || |||||| ||||||||||| ||||||||| |||||||||||||| |||||||| Sbjct 20713 AATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCCCTC 20772 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||||||||| ||| |||| ||| || || |||||||| ||||| ||| |||||| Sbjct 20773 AATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGTGCC 20832 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||| ||||||||||||||||| || || ||| | | |||||| || || || Sbjct 20833 GGCGTTAAAGAGCGTGGGCGTCGCGTGCGTAAAGAACATCTGTGACATGAGCTCATACGT 20892 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | ||| |||| | || | | || | | ||||| || || || Sbjct 20893 ---GTGCAGTGCCGCCTGGATGTCTTGCTTGT--GAATACCCA-----GC-----GCCAC 20937 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 |||||||| ||| | |||||| ||||| ||||| ||| ||| | |||||| Sbjct 20938 GCGCATGATCATCTGCTGGGGGCGCTCCACGACCTTTCCGTTCACGCGGAAGAGGTAGCC 20997 Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGGC 1630544 ||| | ||| ||| ||| |||||| | |||| || ||||||||| |||||| Sbjct 20998 CCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTCCCGGTCGTGGATGATGGC 21057 Score = 168 bits (186), Expect = 8e-36 Identities = 336/504 (67%), Gaps = 8/504 (2%) Strand=Plus/Plus Query 1628101 ACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAA 1628160 ||||||||||| |||||||| | |||||||| |||||| || |||||||| Sbjct 20093 ACAAACTTGGGGAGGGCCACAGACGCCAGGTTGCACACCGCCACCTCATCGGGCGACGTG 20152 Query 1628161 AACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| | |||||| ||||| |||| ||| |||| || |||||||||||||| Sbjct 20153 TACTCCATAATCTCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTC 20212 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | | ||||| | |||||||||| |||||| | ||| |||| ||||| |||||||| Sbjct 20213 GACTTGCGGTTGGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATCTGCGCG 20272 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCAC-GACAGTC---CGCGCGCGGCCCTN 1628336 | | |||||| |||| | ||| | |||| || ||| |||||||| |||| Sbjct 20273 TCCAGGATGGCGAACCACAGCTGCTG----GGCATTGATCGTCTTGCGCGCGCGCCCCTC 20328 Query 1628337 NNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGG 1628396 || || | |||| ||||||||| || ||||| Sbjct 20329 CTTCTCGTACTTCTCGTACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCCGGG 20388 Query 1628397 CGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAG 1628456 ||||| || || || || ||| | ||| | || | || ||| || || Sbjct 20389 GGCCTCATTGGGGCAGAAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAACAG 20448 Query 1628457 GTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT 1628516 || |||||| ||||| |||||||||||||| |||| | ||| ||||||||||| Sbjct 20449 ATCGGGGACCCACAGAGCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTT 20508 Query 1628517 CTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAA 1628576 ||| || || || | |||| | ||| ||||||||||||||||||||| ||| || Sbjct 20509 CTTGCGCAGCTCCAGGAACTCGAACACGTCAGCGTGCCACGGCTCCAGGTAGATGGCGAA 20568 Query 1628577 GGCGCCCTTGCGCTTGCCGCCGCC 1628600 | ||| ||||||||||| || || Sbjct 20569 CGAGCCTTTGCGCTTGCCTCCTCC 20592 Score = 143 bits (158), Expect = 3e-28 Identities = 342/508 (67%), Gaps = 22/508 (4%) Strand=Plus/Plus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGG-CGGGCCTGGTGCGCAGATAGTACATGC 1627039 || ||| ||||| ||||||||||||||||| ||||| | ||||| |||||||||| Sbjct 19195 CTTGTCCACGGTGAACTGGATGGCGTCGGCTTTCGGGCGTCC-GCGCATGTAGTACATGC 19253 Query 1627040 CGGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGC--GCTCGGGCGT 1627097 | |||||||| || ||| |||||| |||||| ||||| | || ||| ||| Sbjct 19254 CCGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATGGACGTCA-GCTTGCTAAT-CGT 19311 Query 1627098 CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 || |||||| || | ||| ||||||||||||||| | |||| | || || || Sbjct 19312 CGGGTCGGCAATGTGAATGTTCAGCGACTGGCTCTGGCAAATGTAGGCGCCACGGTCCGC 19371 Query 1627158 CGCCATGTCGATGGTGACCCGG--TTGGGC---ACCTCCCACACGGTCTTGAAGATGGCC 1627212 || || ||| | || ||| || || | ||||||||| |||||| | | || Sbjct 19372 CGACAGGTCCA-----ACACGGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCC 19426 Query 1627213 TTGAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACG 1627272 |||| | | ||| | | | || || |||||| ||||| | || | Sbjct 19427 TTGACCTGGTCCGGAA--TGGATTTCACCTT----CTGCACGGAGCCACCGTCAGCCAGA 19480 Query 1627273 AGCCTGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGG 1627332 | | || ||| | || |||||||| | ||| || | ||||| ||| | |||| Sbjct 19481 ATCTGGTTGCGCACCTCAGGCGTCCAGATGCCCAGCTCGATCAGCTCCTTCATGAGGTAC 19540 Query 1627333 CGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATG 1627392 ||| || | || || || || | ||||||||||| |||| ||||| ||| Sbjct 19541 TTGTTCACGATCGTGAACTCACCAGCCAGCACGCGGCGGTTGTACATGTTCGACGTGTAC 19600 Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 1627452 |||| | |||| ||||||||| ||||| | ||||| || |||||||| | ||| Sbjct 19601 GGCTCGATGGACTCGTTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGGCATCGGAGCC 19660 Query 1627453 ACGAGGAGCGAGTTGCGCAGGCCGTGCT 1627480 ||||||||||||||||| | |||||||| Sbjct 19661 ACGAGGAGCGAGTTGCGGATGCCGTGCT 19688 >seq1057 Length=9096 Score = 201 bits (222), Expect = 1e-45 Identities = 276/382 (72%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 1573869 GGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGCATC 1573928 ||| ||||| | |||||| | ||| |||| ||||| || ||||| |||||||| |||||| Sbjct 4474 GGCAACATGACGAACCTCATCCTGTCGGGCCCGCCGGGAACGGGGAAGACCACCAGCATC 4415 Query 1573929 GCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAAC 1573988 |||| ||||||| | || | ||| | | | | |||||||||| || |||||| Sbjct 4414 CTGTGTTTGGCGCGCGAACTGCTAGGCACCAGTGTCAAACAGGCCGTGCTGGAGCTCAAC 4355 Query 1573989 GCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGC-CTCCAA 1574047 ||||| ||||| |||||| ||||| ||||||| || |||||| || | ||| Sbjct 4354 GCGTCCGACGACCGCGGCATCGACACGGTGCGCACGAAGATCAAGATGTTTGCGCAGCAA 4295 Query 1574048 GAGGATCGAC-CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCC 1574106 ||| ||| || || || || ||||||||| | | ||||| ||||| ||||||| Sbjct 4294 AAGGT--GACGCTACCCCCGGGCCGCCACAAGATTGTGATCCTGGACGAAGCCGACTCGA 4237 Query 1574107 TCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGC 1574166 | || | |||||||| ||||| ||||| ||||||||| | | | ||| ||| Sbjct 4236 TGACAGCCGCGGCCCAACAGGCGCTGCGCCGCACCATGGAGATCTTCTCGGCCACCACGA 4177 Query 1574167 GCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCG 1574226 | || || ||||| ||||||| ||| | | | |||||||| || |||| || ||||||| Sbjct 4176 GGTTCGCGCTGGCCTGCAACAACTCGACTAAGATCATCGAGCCCATCCAGAGCCGCTGCG 4117 Query 1574227 CCATTCTGCGCTTTGTGCGCCT 1574248 |||| || ||||| |||||| Sbjct 4116 CCATCCTCCGCTTCACGCGCCT 4095 >seq70 Length=62228 Score = 154 bits (170), Expect = 2e-31 Identities = 296/431 (69%), Gaps = 4/431 (1%) Strand=Plus/Minus Query 18061 ATGAGCACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGC 18120 |||||||| || ||| | || | ||||| |||||||||||||||||| | ||| Sbjct 46523 ATGAGCACCTTTGGCCGCTTCTTCCGCGTCACAACCTTTGGCGAGTCGCACTGCAAGGGT 46464 Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGT-GCATGCCACTGGCCGAGGCCGACATCCA 18179 || ||||||||| | ||||||||||| |||| || ||| || | |||||||||||||| Sbjct 46463 GTGGGCTGCATCGTGGACGGCGTGCCCCCGTCGCTTGCG-CTCACGGAGGCCGACATCCA 46405 Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239 ||| ||| | || ||||| || |||||| || || | || || ||| ||||| Sbjct 46404 GCCACAGCTCACGCGCCGCCGCCCCGGCCAGAGCAAGCTCACGACCCCTCGCGACGAGAA 46345 Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGG 18299 || | || | |||| | ||||| ||||| ||| |||||||||| |||| | | Sbjct 46344 GGACCTGGTGACCATCATGAGCGGCACTGAGAAGGGCTTCACGCTCGGTACGCCGCTGGC 46285 Query 18300 CCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCC 18359 ||||| ||| |||| || ||| ||| || || || ||| | ||||| Sbjct 46284 GCTCTTCGTGCCCAATGAGAACGTGCGCCCCAAGGATTACAAGGAGATGGACGCCGTGCC 46225 Query 18360 GCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCA-TCAAGGCGTCGTCGG 18418 || || |||||||||||||| ||| | |||||||||| | | | | | | Sbjct 46224 CCGCCCGGGCCACGCCGACTACACGTACCAGATGAAGTACGGCACGCGCGCCAGCAGC-G 46166 Query 18419 GCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCG 18478 |||| ||||| | ||||| ||||| | ||||| || | ||||| || |||| Sbjct 46165 GCGGCGGCCGCGCCAGCGCCCGGGAGACTATTGGCCGCGTGGCATCTGGCGCCGTGGCCG 46106 Query 18479 AGAAATGGCTC 18489 ||||||||||| Sbjct 46105 AGAAATGGCTC 46095 Score = 132 bits (146), Expect = 6e-25 Identities = 120/150 (80%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103 |||||| || |||||| || ||||||||| ||||||| ||| | ||||| ||| Sbjct 45680 GAGGACTCCACCGGCGGAGTCGTCACGTGCGTGATCCGCAACGCGCCTGTGGGCCTGGGC 45621 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||||||||| |||||||| |||||| ||| || ||||||||| |||| ||||| || Sbjct 45620 GAGCCGTGCTTCGACAAGATGCAGGCCGTGCTGGCGCACGCCATGATGTCCATCCCAGCT 45561 Query 19164 ACCAAGGGATTCGAGATTGGCAGCGGGTTT 19193 |||||||| |||||||| ||| ||||||| Sbjct 45560 ACCAAGGGCTTCGAGATCGGC-TCGGGTTT 45532 >seq127 Length=50725 Score = 132 bits (146), Expect = 6e-25 Identities = 174/238 (73%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 1178255 GACCGGCCGATCGTGCACCGCGACCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTC 1178314 || |||||||| ||||||| ||||||||| ||||| || | || ||| | ||||| Sbjct 5957 GAGCGGCCGATTCTGCACCGAGACCTCAAGAGCCCCAACTTGTTGGTGGACAAGAACTTT 6016 Query 1178315 ACAATCAAGGTGGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGC-GACGATGAC 1178373 | || ||| || | ||||||||| | |||||| || | || ||| ||| ||||| Sbjct 6017 AACATTAAGTTGTCAGACTTTGGCCTGGCCCGCGTCAAGGCTCACG-TGCAGACCATGAC 6075 Query 1178374 GCGG---TGCGGCACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTC 1178430 | | ||||||||| ||||| |||||||||||| ||| || | || ||| | Sbjct 6076 GGGCAACTGCGGCACGGTCCAGTGGATGGCGCCCGAGGTGCTGGGCAACCAGAAGTACAC 6135 Query 1178431 GGAAAAGGCCGACGTCTACTCGTTTGGCGTCGTCATGTGGGAGATCATCACGCGCAAG 1178488 ||| ||||| ||||||| |||||| || ||||||| ||||||||| ||||| || || Sbjct 6136 GGAGAAGGCTGACGTCTTCTCGTTCGGGATCGTCATCTGGGAGATCGTCACGGGCGAG 6193 Score = 118 bits (130), Expect = 1e-20 Identities = 197/284 (69%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGACCTCA 1349491 ||||||||||| | | ||||||||| | || | ||| || ||||||| ||||||| Sbjct 5925 CGGCCAAGGGCATGTCGTACCTGCACCACTTTGAGCGGCCGATTCTGCACCGAGACCTCA 5984 Query 1349492 AGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCCTGG 1349551 ||||| |||| || |||| ||| | |||| ||| | ||| || | ||||||||||||| Sbjct 5985 AGAGCCCCAACTTGTTGGTGGACAAGAACTTTAACATTAAGTTGTCAGACTTTGGCCTGG 6044 Query 1349552 CGCGCATTAAGG---AGGACAACGCCACGATGACCCGCTGCGGCACGCCCTGCTGGACGG 1349608 | ||| | |||| | | | ||| || | | |||||||||| | |||| || Sbjct 6045 CCCGCGTCAAGGCTCACGTGCAGACCATGACGGGCAACTGCGGCACGGTCCAGTGGATGG 6104 Query 1349609 CGCCCGAGGTCATACGCGGCGAGCGCTACGACGAGCGGGCCGACGTCTACTCATTTGGCA 1349668 |||||||||| | || | || ||| ||| ||| ||||||| ||| || || | Sbjct 6105 CGCCCGAGGTGCTGGGCAACCAGAAGTACACGGAGAAGGCTGACGTCTTCTCGTTCGGGA 6164 Query 1349669 TCATCGCGTGGGAGGTGCTCACGCGCCGCCGCCCCTACGACGGC 1349712 || || |||||| | ||||| || | || ||||||||| Sbjct 6165 TCGTCATCTGGGAGATCGTCACGGGCGAGTGTCCGTACGACGGC 6208 >seq673 Length=16404 Score = 131 bits (144), Expect = 2e-24 Identities = 163/221 (74%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | || ||||||||||| ||||||||||| || || | Sbjct 759 GCTTGGCCAGCTCACCAGGGAGCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACA 818 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | ||||||| |||| | Sbjct 819 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGA 878 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG-TTGGAGATGCCCACGTCGGGG 1254521 ||||||||| ||||||||||||| |||||| | | | ||| ||| ||| |||||| Sbjct 879 TGTCGTTGATGAACGAGTTCATGATCGACAT-GCCGCGCTTGCTGATACCCGTCTCGGGG 937 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 ||||| || ||||||||||||||| ||| ||||||||| Sbjct 938 TGCACTTGACGCAGCACCTTGTAGATGTACGTCGAGTACGA 978 >seq57 Length=67627 Score = 123 bits (136), Expect = 3e-22 Identities = 163/223 (73%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | || ||||||||||| ||||||||||| || || | Sbjct 33216 GCTTGGCCAGCTCACCCGGGAGCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACA 33275 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | |||| || |||| | Sbjct 33276 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATACGCTCGAAGA 33335 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACAT--CG-ACTTGTTGGAGATGCCCACGTCGG 1254519 | ||||||| ||||||||||||| |||||| || |||| | ||||||| |||| Sbjct 33336 TATCGTTGATGAACGAGTTCATGATCGACATACCGCGCTTGCT---GATGCCCGTCTCGG 33392 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 |||||||||| ||||||||||||||| | | ||||||||| Sbjct 33393 GGTGCACCTGGCGCAGCACCTTGTAGATGTAGGTCGAGTACGA 33435 >seq97 Length=55146 Score = 122 bits (134), Expect = 1e-21 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 92603 GGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACGAT 92662 ||||||||| |||||| |||||||||||| | ||| ||||| | ||| | Sbjct 36178 GGCGATCTGCTTGGTGAGGCGCTCCTGCACCTGCAGACGGCGCGAAAAGACCTCGCTCAC 36237 Query 92663 GCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCCTT 92722 ||||| || |||||| ||||| | | |||| |||| | ||| || | ||| |||| Sbjct 36238 GCGCGCGAGCTTGCTGAGGCCCAGCACTTTGCCGTTGGGGATGTAACCGATGTGCACCTT 36297 Query 92723 GCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACGAT 92782 |||| | || |||| || |||||||||||||||||| | | ||||| ||| |||||||| Sbjct 36298 GCCCGTGAACGGCACCATGTGGTGCTCGCACATGGAGTACAGGTCGATGTCCCGCACGAT 36357 Query 92783 CACCATCTCG 92792 ||||||||| Sbjct 36358 GACCATCTCG 36367 >seq231 Length=37383 Score = 113 bits (124), Expect = 6e-19 Identities = 116/148 (78%), Gaps = 8/148 (5%) Strand=Plus/Plus Query 1592150 GACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAG 1592209 ||| |||||||| | ||| || ||| | ||||| |||||||||||| | ||||||||| Sbjct 16964 GACATCGAGCAGGAGATCCTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAG 17023 Query 1592210 CCTCTGCTCGATCTTGG-GTGC---AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCC 1592265 ||||| || ||||| |||| ||| ||||||| |||||| ||||| ||| |||| Sbjct 17024 AGCCTGCTGGA-CTTGGCGTGCGCTAAG---GTGGCCAGCATGATTAAGGGAAAGACGCC 17079 Query 1592266 CGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||| |||| || |||||| Sbjct 17080 CCAGGAGATCCGCGAGACGTTCAACATC 17107 >seq1159 Length=8094 Score = 107 bits (118), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 1178267 GTGCACCGCGACCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGTG 1178326 ||||||||||||||||||||| ||| |||| | || ||| ||| |||| || Sbjct 6056 GTGCACCGCGACCTCAAGTCGAAGAACGTGCTGCTAAACCGCAAGTTCCATGCCAAGCTG 6115 Query 1178327 GCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGCGACGATGACG--CGGTG-CGGC 1178383 |||||||||| | ||||| | | | ||| | |||||||||| || | ||| Sbjct 6116 AGCGACTTTGGCGTCAGCCGCAAGACCCACGTCAACGAGACGATGACGTCTGGCGTGGGC 6175 Query 1178384 ACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGAC 1178443 |||| | |||||| ||||||||| || | ||| || |||||||| ||||||||| Sbjct 6176 ACGCTGCTGTGGACCGCGCCCGAGATCATTGAGGGCAAGAAGTACTCGGAGAAGGCCGAC 6235 Query 1178444 GTCTACTCGTTTGGCGTCGTCATGTGGGAGATCATCACGCGCAAGCAGCC 1178493 |||| ||| |||| ||||| ||| ||||| |||| || ||| ||| Sbjct 6236 ATCTATTCGCTTGGAGTCGTGCTGTCAGAGATGGACACGTGCGAGCCGCC 6285 >seq1004 Length=9874 Score = 98.7 bits (108), Expect = 1e-14 Identities = 171/245 (70%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 1347608 TCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAGA 1347667 || ||||||||||||||||||||||||||||||| |||||| | | | || ||| Sbjct 8106 TCATCCACCGCGACCTCAAGTCGCTCAACGTGCTGCTCGACAACCGGCTGCGTGCGAAGC 8165 Query 1347668 TCTCAGACTTTGGCCTCA--CGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGG 1347724 || |||||||| |||| ||| || | ||||| || | | | || ||| ||||| Sbjct 8166 TCAGCGACTTTGGGCTCAGCCGCGAGCGCTCGGCCGACGACACGATGACCAACGGCGTGG 8225 Query 1347725 GCACCGTGCACTGGTCGGCGCCCGAGGTGCTGTCGGCCGACGGCGACGCCAACCTCTTGC 1347784 |||| ||| ||| ||||||||||| | ||| || |||||| | || | | Sbjct 8226 GCACGCTGCTGTGGACGGCGCCCGAGATCCTG-CG-----CGGCGAGACGTACAGCGAGA 8279 Query 1347785 TGGCCGACGTCTACTCGTTTGGCATCGTCCTGTGGGAGGTGCTCACGCGCCAGAGCCCCT 1347844 ||| ||||| ||||||| | |||||| |||| ||| || |||| | | | |||| Sbjct 8280 AGGCGGACGTGTACTCGTACGCCATCGTGCTGTCCGAGCTGGACACGTGTCTGCCGCCCT 8339 Query 1347845 ACGCG 1347849 |||| Sbjct 8340 TCGCG 8344 >seq88 Length=57575 Score = 96.9 bits (106), Expect = 4e-14 Identities = 100/130 (77%), Gaps = 6/130 (5%) Strand=Plus/Plus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || || ||| | ||||| |||||||||||| | ||||||||| | ||||| || || | Sbjct 11867 CTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGTCGCTGCTGGACCTGTCG 11926 Query 1592228 TG---CAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 || |||| ||||| | ||||||||| ||||| |||||||||||||||||| || Sbjct 11927 TGCGCCAAG---GTGGCTACCATGATCAAAGGCAAATCGCCCGAGGAGATCCGCGCCACT 11983 Query 1592285 TTTAACATCA 1592294 ||| ||||| Sbjct 11984 TTTGGCATCA 11993 >seq188 Length=41771 Score = 86.0 bits (94), Expect = 8e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 1726961 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 1727020 || ||||||||||| |||||| || ||| |||||||| |||||||| ||||| ||||| Sbjct 7212 GATCCGTCGAGGTCCGGGTCGTTGATCAGACCCTTCCATCCGACGGTGGTGCGAGGCTTC 7153 Query 1727021 TCGACATAGGCGCGCATGAC 1727040 |||| ||| |||||||||| Sbjct 7152 TCGAAGTAGACGCGCATGAC 7133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106764820916154