Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933405.1_202017-01-04] 4,562 sequences; 39,184,277 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1057 215 8e-50 seq187 203 5e-46 seq18 194 3e-43 seq57 161 2e-33 seq673 156 7e-32 seq97 143 4e-28 seq127 132 8e-25 seq201 114 2e-19 seq422 104 4e-16 seq822 98.7 2e-14 seq231 98.7 2e-14 seq30 96.9 5e-14 seq1159 93.3 7e-13 seq1004 91.5 2e-12 seq203 87.8 3e-11 seq188 86.0 1e-10 >seq1057 Length=9096 Score = 215 bits (238), Expect = 8e-50 Identities = 337/480 (70%), Gaps = 4/480 (1%) Strand=Plus/Minus Query 2018916 CCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCC 2018975 |||||| | || |||||||| ||| |||| | ||| | ||||||||| || | Sbjct 4564 CCGTGGGTGGAGAAGTACCGGCCGCGCATGCTGGCGGACGTGGTGGGCAACCGCGACACG 4505 Query 2018976 GTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGC 2019035 | || || |||| |||| | ||||||||| | |||||| | ||| ||||| Sbjct 4504 ATCGCGAGTCTGCAGGCCATGGCGCAAGCGGGCAACATGACGAACCTCATCCTGTCGGGC 4445 Query 2019036 CCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCG 2019095 ||||| || ||||| |||||||| |||||| ||| ||||||||| || | ||| | Sbjct 4444 CCGCCGGGAACGGGGAAGACCACCAGCATCCTGTGTTTGGCGCGCGAACTGCTAGGCACC 4385 Query 2019096 GCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTG 2019155 | | | |||||||||| || ||||| ||||| ||||| |||||| | ||| ||| Sbjct 4384 AGTGTCAAACAGGCCGTGCTGGAGCTCAACGCGTCCGACGACCGCGGCATCGACACGGTG 4325 Query 2019156 CGTAGAATCATCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACA 2019213 || | | |||||| | ||| | ||| | || || || || |||||||||| Sbjct 4324 CGCACGAAGATCAAGATGTTTGCGCAGCAAAAGGTGACG--CTACCCCCGGGCCGCCACA 4267 Query 2019214 AGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGAT 2019273 || | | ||||| || || ||||||| | || | |||||||| ||||| || || Sbjct 4266 AGATTGTGATCCTGGACGAAGCCGACTCGATGACAGCCGCGGCCCAACAGGCGCTGCGCC 4207 Query 2019274 CGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGA 2019333 |||||||| | | | | ||| ||| |||| |||||||||||||||| ||| | | Sbjct 4206 GCACCATGGAGATCTTCTCGGCCACCACGAGGTTCGCGCTGGCCTGCAACAACTCGACTA 4147 Query 2019334 TGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACG 2019393 | ||||||| || |||||||||| ||||||||| | ||||| ||||||| |||||| Sbjct 4146 AGATCATCGAGCCCATCCAGAGCCGCTGCGCCATCCTCCGCTTCACGCGCCTACCCGACG 4087 >seq187 Length=41780 Score = 203 bits (224), Expect = 5e-46 Identities = 349/505 (69%), Gaps = 15/505 (3%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| |||||||| |||||||| || ||||| | |||||||| | | |||||||| Sbjct 20593 CTGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGTTGGA 20652 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| ||||| | |||| | || |||||| | |||||| || ||| Sbjct 20653 TGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCATACTAATGCC 20712 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || |||||| |||||||||| |||||||| || ||||| ||||| |||||||| Sbjct 20713 AATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCCCTC 20772 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||||||||| ||| |||| ||| ||| || |||||||| ||||| |||| |||||| Sbjct 20773 AATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGTGCC 20832 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||| || ||||||||||||||||| ||| | || || |||||| ||| || || Sbjct 20833 GGCGTTAAAGAGCGTGGGCGTCGCGTGCGTAAAGAACATCTGTGACATGAGCTCATACGT 20892 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | ||| |||| | |||||| | | | | ||||| || || || Sbjct 20893 ---GTGCAGTGCCGCCTGGATGTCTTG--CTTGTGAATACCCA-----GC-----GCCAC 20937 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959 |||||||||||| | |||||| ||||| ||||| || ||| | |||||| Sbjct 20938 GCGCATGATCATCTGCTGGGGGCGCTCCACGACCTTTCCGTTCACGCGGAAGAGGTAGCC 20997 Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019 ||| || ||| | ||| ||||| ||| | | ||| || |||||| |||||| Sbjct 20998 CCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTCCCGGTCGTGGATGATGGC 21057 Query 2074020 GGCGTCGAGGGCCTCCTTGTGCGCC 2074044 | || || | ||||||||| || Sbjct 21058 CGAGTTAAGCTCGTCCTTGTGCTCC 21082 Score = 154 bits (170), Expect = 2e-31 Identities = 288/429 (67%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643 |||| ||||| |||| ||| | ||||| |||||||||||||| | |||| Sbjct 20164 CTCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTT 20223 Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703 | | |||||||||| ||||||| | ||| | |||||||| |||||||| | |||||| Sbjct 20224 GGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGC 20283 Query 2071704 CGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNN 2071763 |||| | || | || | || | | |||||| |||| Sbjct 20284 GAACCACAGCTGCTGGGCATTGATCGTCTTGCGCGCGCGCCCCTCCTTCTCGTACTTCTC 20343 Query 2071764 NNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCA 2071823 | || | || || || |||| |||||||| || ||||| ||||| ||||| Sbjct 20344 GTACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCCGGGGGCCTCATTGGGGCA 20403 Query 2071824 AAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAG 2071883 || || ||| | |||| | |||| || ||| ||||| ||| |||||| Sbjct 20404 GAAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAACAGATCGGGGACCCACAG 20463 Query 2071884 GCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAG 2071943 |||| ||||| |||||||| |||| | ||| |||||||||||||| ||| || || Sbjct 20464 AGCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGCTCCAG 20523 Query 2071944 CCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTT 2072003 | |||| | ||| ||||||||||||||||||||| ||| || | ||| |||||||| Sbjct 20524 GAACTCGAACACGTCAGCGTGCCACGGCTCCAGGTAGATGGCGAACGAGCCTTTGCGCTT 20583 Query 2072004 GCCGCCGCC 2072012 ||| || || Sbjct 20584 GCCTCCTCC 20592 Score = 127 bits (140), Expect = 3e-23 Identities = 336/507 (66%), Gaps = 26/507 (5%) Strand=Plus/Plus Query 2069253 GTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGT 2069312 ||| ||||| ||||||||||||| ||| || || ||||| ||||||||||| || Sbjct 19198 GTCCACGGTGAACTGGATGGCGTCGGCTTTCGGGCGTCCGCGCATGTAGTACATGCCCGT 19257 Query 2069313 CTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGA---TGG-ACTCGGCATTCG 2069368 |||||| || ||| |||||| |||||| ||||| | || | ||| ||| Sbjct 19258 CTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATGGACGTCAGCTTGCTAATCG----TCG 19313 Query 2069369 GGACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCG 2069428 || ||||| || | ||| ||||||||||||||| | |||| | ||||| |||| Sbjct 19314 GGTCGGCAATGTGAATGTTCAGCGACTGGCTCTGGCAAATGTAGGCGCCACGGTCCGCCG 19373 Query 2069429 CCATGTCGATGGTCACGCGGTTGGAC---ACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485 || ||| | |||| || | | ||||||||| |||||| || |||||| Sbjct 19374 ACAGGTCCAA---CACGGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCCTTGA 19430 Query 2069486 GATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGC 2069545 || ||| | | | ||| | |||||| ||||| | || | | Sbjct 19431 CCTGGTCCGGAA--TGGATTTCACCTT----CTGCACGGAGCCACCGTCAGCCAGAATCT 19484 Query 2069546 GGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGT 2069605 ||| ||| | || |||||||| | ||| || | |||| |||| || | || | Sbjct 19485 GGTTGCGCACCTCAGGCGTCCAGATGCCCAGCTCGATCA---GCTCCTTCATGAGGTACT 19541 Query 2069606 TGACCACG---GTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGA 2069662 || |||| || || || || | ||||||||||| |||| ||||| |||| Sbjct 19542 TGTTCACGATCGTGAACTCACCAGCCAGCACGCGGCGGTTGTACATGTTCGACGTGTACG 19601 Query 2069663 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 2069722 |||| | |||| ||||||||| ||||| | ||||| || |||||||| | |||| Sbjct 19602 GCTCGATGGACTCGTTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGGCATCGGAGCCA 19661 Query 2069723 CGAGCAGCGAGTTGCGCAGGCCGTACT 2069749 |||| ||||||||||| | ||||| || Sbjct 19662 CGAGGAGCGAGTTGCGGATGCCGTGCT 19688 >seq18 Length=94768 Score = 194 bits (214), Expect = 3e-43 Identities = 190/243 (78%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || ||||||| ||||||||||||||| |||||| |||||||||||||||| ||| Sbjct 728 ACACCAGCCTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGC 787 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG----CACCC 794008 ||||||| |||||||| ||||||||| | ||| || || ||| | ||||| Sbjct 788 GAGATCATATCCATCCAGTCGAACGGGTT---CTTCACGTTGTAGATCTTGGATGCACCC 844 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 || || |||||||||||||| ||||| || ||||||||||||||||| || | ||| Sbjct 845 -AGTGAGTACAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTT 903 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 ||||||||| ||| ||||||| ||||| ||||| || ||||| | ||| ||| | || || Sbjct 904 CATGCCGATCAGCTCCACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGC 963 Query 794129 CTC 794131 || Sbjct 964 GTC 966 Score = 192 bits (212), Expect = 9e-43 Identities = 240/327 (73%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||| | ||||| |||| || || |||||||||||||||||| Sbjct 1049 CCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGGCATGAGGCCGCGCTTC 1108 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||||| |||||||| || |||||||| |||||||| || Sbjct 1109 TTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCCCTCCACGGCGGCGAAC 1168 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || ||||| | | | | | | | || |||||| | |||||| Sbjct 1169 GCCAGCAGACGCTCCGGGTAGGA--CGAAACACGAGG-GTCACACCACTTGAGCGCCCAG 1225 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 ||||| ||| ||| | || | ||| |||||||| || | | ||| |||||||| Sbjct 1226 CGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCAAGTGATCCTTCTCC 1285 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 || | |||||||| ||| |||||||| || |||||||| ||| ||||||||||| ||| Sbjct 1286 ACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCTCCGAGTGGATGTTCTCG 1345 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||||||||| || |||||| Sbjct 1346 ATGGCGATCTGGAAGCCGTAGAAGCAG 1372 Score = 158 bits (174), Expect = 2e-32 Identities = 190/254 (75%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || ||||| ||||| || ||||| ||||||||||| |||||||||| Sbjct 1376 GCCTCCGGCACTTGCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCG 1435 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||||| ||||| || || || ||||||||||| ||||| ||||||| ||| | || Sbjct 1436 TCGCTGGCAGCGAAGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGG 1495 Query 796270 GAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 |||||| | |||| || || ||||| | ||||||||| ||||| || || || Sbjct 1496 TTCCCCCAGTCCTTCAGGTCGTGCACC-AGGTCCAGCTCCTCGGCCGTCCAGAACGACGC 1554 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGGAACAGAACAAAG 796386 ||| ||||| |||||||||| ||| | ||| || | |||| |||||||| || || Sbjct 1555 CTCCGCCTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGGAACAGCACGAAC 1612 Query 796387 CGATTGGGGTTCTC 796400 || || |||||||| Sbjct 1613 CGGTTCGGGTTCTC 1626 >seq57 Length=67627 Score = 161 bits (178), Expect = 2e-33 Identities = 191/259 (74%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||| || |||||||| || ||||| || ||||||||| ||||||| || || | | Sbjct 33177 TGAACTTAGTCACGGCCTTCGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCACCCGGGA 33236 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||||||||| ||||||||||| ||| || | ||| |||||| | Sbjct 33237 GCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACAGCGTCGACTTCTTGTTGTAAC 33296 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||| ||||||||| | | |||| || |||| || ||||||| |||||||||| Sbjct 33297 GCGACAGCTTGCCGGCCTCCGAGGCGATACGCTCGAAGATATCGTTGATGAACGAGTTCA 33356 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| ||| ||||||| |||||||||||||| |||||||||| Sbjct 33357 TGATCGACATACCGCGCTTGCTGATGCCCGTCTCGGGGTGCACCTGGCGCAGCACCTTGT 33416 Query 1485710 AAACAAAGGACGAGTACGA 1485728 | | ||| ||||||||| Sbjct 33417 AGATGTAGGTCGAGTACGA 33435 >seq673 Length=16404 Score = 156 bits (172), Expect = 7e-32 Identities = 190/259 (73%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||| || |||||||| || ||||| || ||||||||| ||||||| || || | | Sbjct 720 TGAACTTAGTCACGGCCTTCGTGCCCTCCGACACGGCGTGCTTGGCCAGCTCACCAGGGA 779 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||||||||| ||||||||||| ||| || | ||| |||||| | Sbjct 780 GCATGAGGCGCACGGCCGTCTGGATCTCACGGCTGGACAGCGTCGACTTCTTGTTGTAAC 839 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||| ||||||||| | | ||||||| |||| |||||||||| |||||||||| Sbjct 840 GCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGATGTCGTTGATGAACGAGTTCA 899 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| ||| ||| ||| ||||||||||| || |||||||||| Sbjct 900 TGATCGACATGCCGCGCTTGCTGATACCCGTCTCGGGGTGCACTTGACGCAGCACCTTGT 959 Query 1485710 AAACAAAGGACGAGTACGA 1485728 | | | | ||||||||| Sbjct 960 AGATGTACGTCGAGTACGA 978 >seq97 Length=55146 Score = 143 bits (158), Expect = 4e-28 Identities = 224/318 (70%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 118582 CGCCCAGGAGGACGCGCGTGACCGTGTTTGACCCGTTCTTGCGCACGCCGCGCATGCACA 118641 ||||||| | | || |||||| ||| | | ||| |||| |||||||||||| || Sbjct 36051 CGCCCAGCACGGAGCTCGTGACGGTGCTGGCGCCGCTCTTCTCGACGCCGCGCATGACCA 36110 Query 118642 CGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCGCGCCCG-TGACCTCGCTG 118700 |||||||||| | |||||| ||| ||| | ||||| | | || | |||| | || Sbjct 36111 TGCACATGTGGGTGGCCTCGATCACAACGGCCACGCC-CTTGGGCTCAATGACGCCCATG 36169 Query 118701 ATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATG 118760 ||| ||||||||| ||||| |||||||||||| | ||| ||| | | Sbjct 36170 ATGGCGGTGGCGATCTGCTTGGTGAGGCGCTCCTGCACCTGCAGACGGCGCGAAAAGACC 36229 Query 118761 TCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACG 118820 ||| | ||||| || |||||| ||||| | | |||| ||| | ||| || | | Sbjct 36230 TCGCTCACGCGCGCGAGCTTGCTGAGGCCCAGCACTTTGCCGTTGGGGATGTAACCGATG 36289 Query 118821 TGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCG 118880 ||| ||||||| | || |||| || |||||||||||||||||| | | ||| ||||| Sbjct 36290 TGCACCTTGCCCGTGAACGGCACCATGTGGTGCTCGCACATGGAGTACAGGTCGATGTCC 36349 Query 118881 CGCACGGTCACCATCTCG 118898 |||||| | ||||||||| Sbjct 36350 CGCACGATGACCATCTCG 36367 >seq127 Length=50725 Score = 132 bits (146), Expect = 8e-25 Identities = 174/238 (73%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 1217382 GACCGACCCATTGTGCACCGCGACCTCAAGAGCAGCAACCTGTTGGTCGACGACAATTTC 1217441 || || || ||| ||||||| |||||||||||| |||| ||||||| ||| | || || Sbjct 5957 GAGCGGCCGATTCTGCACCGAGACCTCAAGAGCCCCAACTTGTTGGTGGACAAGAACTTT 6016 Query 1217442 ACGATCAAGGTGGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGC-GACGATGAC 1217500 | || ||| || | ||||||||| | |||||| || | || ||| ||| ||||| Sbjct 6017 AACATTAAGTTGTCAGACTTTGGCCTGGCCCGCGTCAAGGCTCAC-GTGCAGACCATGAC 6075 Query 1217501 ---CCGGTGCGGCACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCGAGCGCTACTC 1217557 | ||||||||| ||||| |||||||||| | ||| || | || ||| | Sbjct 6076 GGGCAACTGCGGCACGGTCCAGTGGATGGCGCCCGAGGTGCTGGGCAACCAGAAGTACAC 6135 Query 1217558 GGAAAAGGCCGACATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCACGCGCAAG 1217615 ||| ||||| ||| ||| ||| ||||| |||||||| ||||||||| ||||| || || Sbjct 6136 GGAGAAGGCTGACGTCTTCTCGTTCGGGATCGTCATCTGGGAGATCGTCACGGGCGAG 6193 >seq201 Length=39776 Score = 114 bits (126), Expect = 2e-19 Identities = 289/431 (67%), Gaps = 20/431 (5%) Strand=Plus/Minus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 ||||| |||||||||| || || || || |||| | ||| | || | || |||| Sbjct 12828 TGCCGCCGGTGCCGTTCTTGAAGCCCACAGGCATGGACAGGCCACTCGTGAGCTCACGGT 12769 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAAT 2175195 ||| |||| |||||| ||||| ||||| | || ||||||| ||| ||||| ||| Sbjct 12768 GCAGCTGGGACTCGGTCGTGCGAGCGCCAATAGCCCCCCACGACACCAGGTCGGCCGTGA 12709 Query 2175196 AGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACCA 2175255 | ||| | | | | ||||||| | ||||||| || | || || || Sbjct 12708 ACTGCGGTGAGATGGTGTCCAAGAACTCGAGACTCACGGGCAACCCCAG--CG-CGTTCA 12652 Query 2175256 GGTCGCGCAGCAGTCGACG--CGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTC 2175313 ||| |||||||| || ||||| || | ||| | | |||| | ||| ||| Sbjct 12651 CGTCCAGCAGCAGTTTGCGTGCGATGCGG--ATGCCCTTGTTGATGCGGAAGGACTGGTC 12594 Query 2175314 GAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATA 2175373 ||||| |||||| || || |||||||| |||||||||||||||||||| |||| || Sbjct 12593 CAGGTCCGGGTCGTTGATGAGTCCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCGAAGTA 12534 Query 2175374 GGCGCGCATGACCACCAGGAGAGCGTCGCCGACCT-CTGTCTCGGCAA----AGGTGCGC 2175428 | |||||||| ||||| || || || ||| || ||| | || | ||| |||| Sbjct 12533 CGTGCGCATGATGACCAGCAGCTCGCCGTCGAGCTCCTGGGCCAGCGACTGGAGGCGCGC 12474 Query 2175429 AGCCGTCGGCCATACTCGACGATGGCCTGGGGATCGTGCGCCGAACACGGACCGACGACC 2175488 || ||| | |||| | || |||| | ||||| || ||||| || |||||| Sbjct 12473 AG-CGTAGTCCAT----GGCGGCGGCCACG---TCGTGGATGGAGCACGGGCCCACGACC 12422 Query 2175489 ACCAAGAGACG 2175499 |||| ||| || Sbjct 12421 ACCACGAGGCG 12411 >seq422 Length=25203 Score = 104 bits (114), Expect = 4e-16 Identities = 115/150 (77%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 679834 AGCCCATCGAGCGAGCGGATGCGCGACAGCGCCACGTAGGCCTGGCCACAGTCAAAGATG 679893 ||||| || |||||||| | ||| ||||| ||||| |||||||||||| | || || | | Sbjct 20125 AGCCCTTCCAGCGAGCGCACGCGGGACAGTGCCACATAGGCCTGGCCAAACTCGAACACG 20184 Query 679894 C-CG-CTCATCGAGATGACAGCGCGGTCCAACGACATGCCCTGGCACTTGTGGATGGTCA 679951 | || | ||| | |||||| ||| ||||||| ||||||| |||||||||| | | Sbjct 20185 CGCGACAGATC--CAACACAGCGGCGTCGAACGACAGTCCCTGGCTCTTGTGGATGCTGA 20242 Query 679952 TGGCCCACGCCAGCAGCAGTGGCACCTGCC 679981 ||||||| |||||| || |||| ||||| Sbjct 20243 TGGCCCAGGCCAGCGCCAACGGCAGCTGCC 20272 >seq822 Length=12614 Score = 98.7 bits (108), Expect = 2e-14 Identities = 161/227 (71%), Gaps = 14/227 (6%) Strand=Plus/Minus Query 1249584 TGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAACCTGCTGGTCG 1249643 ||||| || | || ||| || | ||||||||||||||| || ||| | ||| || Sbjct 1795 TGCACTCGTTGGAGCCGGTGGTGCTGCACCGCGATCTCAAGTCCATGAACATCCTGCTCA 1736 Query 1249644 AC---GACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCATCCGCGAGGACA 1249700 || |||| | | || |||| | | ||||||||| || |||||| | ||| Sbjct 1735 ACTCGGACGGGGA---TGCCAAGCTCACGGACTTTGGTGTCTCGCGCAAATG----GACG 1683 Query 1249701 ATGC-CACCATGACG--CGGTGCGG-CACGCCGGCGTGGACGGCGCCCGAGGTCATCCGC 1249756 || |||||||||| ||| | || ||||| | ||||| ||||||||||||||| Sbjct 1682 GTGGACACCATGACGGCCGGCGTGGGCACGCGGCGGTGGATGGCGCCCGAGGTCATGATG 1623 Query 1249757 GGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 ||| ||||||||||| |||||||| ||| |||| ||||| |||| Sbjct 1622 GGCAAGCGCTACGACACAAGCGCCGACATCTTCTCGTTCGGCGTCGT 1576 Score = 86.0 bits (94), Expect = 1e-10 Identities = 170/244 (70%), Gaps = 21/244 (9%) Strand=Plus/Minus Query 1249571 GGCGTCG-CCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAG---AG 1249626 ||||| | |||| || ||| |||||||||| || | |||||||| |||||| || Sbjct 4002 GGCGTTGACCTACCTCCACTCGCTCGACCCCAAGGTGCTGCACCGCGACCTCAAGTCGAG 3943 Query 1249627 CAGCAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCG 1249686 | || | ||||| ||| | ||| ||| |||| | | |||||||| |||| || Sbjct 3942 GAACATCTTGCTG-TCGCC--CGAACTGGATGCCAAGCTCTCGGACTTTGGGGTCGCCCG 3886 Query 1249687 CATCCGCGAGGACAA-TGC--CACCATGAC----GCGGTGCGGCACGCCGGCGTGGACGG 1249739 || | ||| | | || |||||| | |||| |||||| || |||| || Sbjct 3885 CA------AATACAGCTTCAGCAGCATGACCGCAGGGGTG-GGCACGTCGCTCTGGATGG 3833 Query 1249740 CGCCCGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCA 1249799 | ||||||||||| | |||||| || ||||||| |||||||| ||| |||| ||||| Sbjct 3832 CCCCCGAGGTCATGCTCGGCGACCGGTACGACGCCAGCGCCGACATCTTCTCGTTCGGCG 3773 Query 1249800 TCGT 1249803 |||| Sbjct 3772 TCGT 3769 >seq231 Length=37383 Score = 98.7 bits (108), Expect = 2e-14 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 2035628 CCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGG 2035687 ||| || ||| | ||||| |||||||||||| | ||||||||| ||| || || |||| Sbjct 16981 CCTGTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGAGCCTGCTGGACTTGGC 17040 Query 2035688 GTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTT 2035747 |||| | ||||||| | | || ||||| ||| ||||| |||| |||||| |||| || Sbjct 17041 GTGCGCTAAGGTGGCCAGCATGATTAAGGGAAAGACGCCCCAGGAGATCCGCGAGACGTT 17100 Query 2035748 TAACATC 2035754 |||||| Sbjct 17101 CAACATC 17107 >seq30 Length=79931 Score = 96.9 bits (106), Expect = 5e-14 Identities = 171/243 (70%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 1249560 CGGCGGCCACGGGCGTCGCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATC 1249619 || || ||| | || || | || |||||| |||| |||||||| ||| | ||||| |||| Sbjct 75671 CGTCGCCCATGCGC-TCACGTACCTGCACTCGCTGGACCCGCCAGTCCTGCACCGTGATC 75729 Query 1249620 TCAAGAGCAGCAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG-- 1249677 ||||| || ||| | ||| || | ||||| | | ||||| | |||||||| Sbjct 75730 TCAAGTCCAAGAACATCCTGCTCAGCTCCGAGTTGGAAGCGAAGGTCACGGACTTTGGCA 75789 Query 1249678 TCTCGCGCGCATCCGCGAGGACAATGCCACCATGACG--CGGTGC-GGCACGCCGGCGTG 1249734 |||| |||| | | ||||| |||||||| ||||| |||||| || ||| Sbjct 75790 TCTCCCGCGAAA--GGATTGACAAG---ACCATGACTGCCGGTGTAGGCACGTCGCTGTG 75844 Query 1249735 GACGGCGCCCGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGAT 1249794 || |||||||||||| || |||||| | |||||||| |||||| ||| |||| | Sbjct 75845 GATGGCGCCCGAGGTGATGATAGGCGAGAGGTACGACGACAAGGCCGACATCTTCTCGTT 75904 Query 1249795 CGG 1249797 ||| Sbjct 75905 CGG 75907 >seq1159 Length=8094 Score = 93.3 bits (102), Expect = 7e-13 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 1217394 GTGCACCGCGACCTCAAGAGCAGCAACCTGTTGGTCGACGACAATTTCACGATCAAGGTG 1217453 |||||||||||||||||| | ||| || || | || ||| ||| |||| || Sbjct 6056 GTGCACCGCGACCTCAAGTCGAAGAACGTGCTGCTAAACCGCAAGTTCCATGCCAAGCTG 6115 Query 1217454 GCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAATGCGACGATGAC--CCGGTGCGG-C 1217510 |||||||||| | ||||| | | | ||| | ||||||||| | || | || | Sbjct 6116 AGCGACTTTGGCGTCAGCCGCAAGACCCACGTCAACGAGACGATGACGTCTGGCGTGGGC 6175 Query 1217511 ACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGAC 1217570 |||| | |||||| |||||||||||| | ||| || |||||||| ||||||||| Sbjct 6176 ACGCTGCTGTGGACCGCGCCCGAGATCATTGAGGGCAAGAAGTACTCGGAGAAGGCCGAC 6235 Query 1217571 ATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCACGCGCAAGCAGCC 1217620 ||||| || | || |||| ||| ||||| |||| || ||| ||| Sbjct 6236 ATCTATTCGCTTGGAGTCGTGCTGTCAGAGATGGACACGTGCGAGCCGCC 6285 >seq1004 Length=9874 Score = 91.5 bits (100), Expect = 2e-12 Identities = 169/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 1217358 GGCG-TGGCCTATTTGCACGGGCGCGA-CCGACCCATTGTGCACCGCGACCTCAAGAGCA 1217415 |||| |||| ||| ||||||| ||| | |||| || | ||||||||||||||| Sbjct 8071 GGCGCTGGCGTATCTGCACGGCCGCCAGCCGATT-ATCATCCACCGCGACCTCAAGTCGC 8129 Query 1217416 GCAACCTGTTGGTCGACGACAATTTCACGATC-AAGGTGGCCGACTTTGGCTTTGCCCGC 1217474 |||| || || ||||| || | || | ||| | ||||||||| | |||| Sbjct 8130 TCAACGTGCTGCTCGACAACCGGCTG-CGTGCGAAGCTCAGCGACTTTGGGCTCAGCCGC 8188 Query 1217475 ATCCGCGAGGACAATGCGACGATGACC--CGGTGCGG-CACGCCGGCGTGGACGGCGCCC 1217531 ||| || | | | ||||||||| ||| | || ||||| | ||||||||||||| Sbjct 8189 GAGCGCTCGGCCGACGACACGATGACCAACGGCGTGGGCACGCTGCTGTGGACGGCGCCC 8248 Query 1217532 GAGATCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGACATCTACTCTTTCGGCATCGT 1217590 |||||||||||||||||| ||| || ||||| ||| | ||||| | || |||||| Sbjct 8249 GAGATCCTGCGCGGCGAGACGTACAGCGAGAAGGCGGACGTGTACTCGTACGCCATCGT 8307 >seq203 Length=39606 Score = 87.8 bits (96), Expect = 3e-11 Identities = 101/134 (75%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 1217493 ACGATGAC--CCGGTG-CGGCACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCGAG 1217549 |||||||| | |||| |||||||||| |||||||| || ||||||||| ||| || Sbjct 36981 ACGATGACGGCGGGTGTCGGCACGCCGTACTGGACGGCCCCAGAGATCCTGGAAGGCAAG 37040 Query 1217550 CGCTACTCGGAAAAGGCCGACATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCACG 1217609 || ||| |||| |||| ||||||||||| |||||| | || || |||| | |||| Sbjct 37041 CGATACACGGAGCAGGCGGACATCTACTCGTTCGGCGTGGTGCTGACGGAGCTGGACACG 37100 Query 1217610 CGCAAGCAGCCCTA 1217623 ||||| ||||| Sbjct 37101 TGCAAGATCCCCTA 37114 >seq188 Length=41771 Score = 86.0 bits (94), Expect = 1e-10 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2175306 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 2175365 || ||||||||||| |||||| || ||| |||||||| |||||||| ||||| ||||| Sbjct 7212 GATCCGTCGAGGTCCGGGTCGTTGATCAGACCCTTCCATCCGACGGTGGTGCGAGGCTTC 7153 Query 2175366 TCGACATAGGCGCGCATGAC 2175385 |||| ||| |||||||||| Sbjct 7152 TCGAAGTAGACGCGCATGAC 7133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915761119252718