Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933405.1_202017-01-04] 4,562 sequences; 39,184,277 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq187 282 5e-71 seq369 158 1e-33 seq18 154 2e-32 seq287 104 3e-17 seq25 87.8 2e-12 >seq187 Length=41780 Score = 282 bits (312), Expect = 5e-71 Identities = 545/788 (69%), Gaps = 26/788 (3%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||| || ||||||| ||| | ||| | || ||| | | | ||||| Sbjct 20945 TCATGCGCGTGGCGCTGGGTATTCACAAGCAAGACATCCAGGCGGCACTGC-ACACGTAT 20887 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 || | ||| || | || |||||||||||| ||||| || || || ||||| || ||| Sbjct 20886 GAGCTCATGTCACAGATGTTCTTTACGCACGCGACGCCCACGCTCTTTAACGCCGGCACG 20827 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | || ||| ||||| || |||||| |||| ||| |||| |||||||| || ||| Sbjct 20826 CCGCGTCCGCAGCTGTCGTCGTGTTTCCTGCTGGCCATGCAGGACGACTCGATTGAGGGC 20767 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| ||||||||| |||| || ||||||||||||| | || ||||| || || Sbjct 20766 ATTTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCCGGAGGTATTGGCATT 20707 Query 53432 CAC-TGCTCGAACGTCCGTGC---GAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487 ||| | ||| |||| || |||| || || ||| || |||||||| | Sbjct 20706 AGTATGCAC-AACATCCGCGCCACGAACAGCT-AC--ATCCGCGGCACGAACGGATCATC 20651 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | | || ||| | || ||||| | |||||||| |||||||||| || || ||||||| Sbjct 20650 CAACGGGATCATCCCCATGCTGAGGGTCTTCAATGACACGGCCCGCTATGTGGACCAGGG 20591 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 || || |||||||| || ||||||||||||||||| |||||||||||||| ||| | | Sbjct 20590 AGGAGGCAAGCGCAAAGGCTCGTTCGCCATCTACCTGGAGCCGTGGCACGCTGACGTGTT 20531 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC---CGTGACCT 53664 ||||| || |||||||| ||| || || | | ||| ||| | || || ||||| Sbjct 20530 CGAGTTCCTGGAGCTGCGCAAGAACCACGG---CAACGAGCTGCACCGCGCGCGCGACCT 20474 Query 53665 GTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGT 53723 || ||| ||||||||| | || || || |||||| | ||||| | ||| ||| Sbjct 20473 CTTCTAC-GCTCTGTGGGTCCCCGATCTGTTCATGAAGCGTGTGGAAGCGAACGGCAAGT 20415 Query 53724 GGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTGAGGAGTTT 53782 || ||| | ||||| || ||| |||||| ||| | | ||| || || || ||||| Sbjct 20414 GGAGCCTTTTCTGCCCCAATGAGGCCCCCGGACTCTACGAGTG-CTGGGGCGACGAGTT- 20357 Query 53783 AACGAGA---TGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 ||||| |||| || ||||| |||| ||| |||| | |||| || Sbjct 20356 --CGAGACTCTGTACGAGAAGTACGAGAAGGAGGGGCGCGCGCGCAAGACGATCAATGCC 20299 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| || ||||| | ||| | |||||||| ||||| |||| Sbjct 20298 CAGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATTGAGACGGGCGTGCCGTTCATGCTG 20239 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGC 53959 |||||||| ||| |||| ||| |||||| ||||| ||||| ||| |||||| Sbjct 20238 TACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCTCGAGC 20179 Query 53960 AACTTATG 53967 ||||| || Sbjct 20178 AACTTGTG 20171 Score = 208 bits (230), Expect = 8e-49 Identities = 567/849 (67%), Gaps = 53/849 (6%) Strand=Plus/Minus Query 55106 AAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAAT 55165 ||||| |||| ||||| || ||||| |||||| ||||| |||||| ||| || Sbjct 20067 AAGCTGTACGAGGTGACCAAGGTGGTGACCCGGAACTTGAACAAGGTCATTGACGTCAAC 20008 Query 55166 TACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCGGT 55225 |||||||| || | |||||||||||||||| | || ||||| || | | || || Sbjct 20007 TACTACCCCGTGGAGGAGGCGCGCAAGTCCAACATGCGCCACCGCCCGGTTGGTATTGGC 19948 Query 55226 GTACAGGGCTTGGCCGA--CATCT-TCATGATGCTCGGATTGCCCTTCGA---CTCGGAA 55279 || ||||| | || || ||| | || | ||| | ||| ||||| | || || Sbjct 19947 GTCCAGGGTCTCGCGGATGCATTTATCCTCATGAACTA--TGCG-TTCGAGAGCCCGCAA 19891 Query 55280 CCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGA 55338 || || ||| | ||| | |||||||| || || ||||||| || | | ||| Sbjct 19890 ---GCCCGTGAACTCAACATGAACATCTTCGAGACG-ATCTACTACGCTTCTATGGAGAC 19835 Query 55339 GTCGT--GTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCT 55396 ||| | ||| | | | |||| ||| | ||||||||||||| | ||||| || Sbjct 19834 CTCGATGGAGATC-GCCAAGGAGCT-GGGCCCGTACGAGACGTTCCAGGGATCGCCTGCC 19777 Query 55397 GACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCCCATGTTTGA-CAAGTT 55455 |||||| | |||||||||| | |||||| ||| ||||| | || | | || Sbjct 19776 AGCAAGGGTATCTTCCAGTTCGACATGTGGGGC--GTC--ACCCCGTCTTCGGGCTTGTG 19721 Query 55456 G---------------AAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGT 55500 | ||| | || | | | ||| | |||||||| || ||||| Sbjct 19720 GGATTGGGCTGCGCTCAAGGAGAACGTGATCAAGCACGGCATCCGCAACTCGCTCCTCGT 19661 Query 55501 GGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCC 55560 ||| || ||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct 19660 GGCTCCGATGCCCACTGCGTCGACGGCTCAGATTTTGGGCAACAACGAGTCCATCGAGCC 19601 Query 55561 GTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATC---AA 55617 ||||||| | ||||| ||| ||||| || || ||||||| ||| |||| || Sbjct 19600 GTACACGTCGAACATGTACAACCGCCGCGTGCTGGCTGGTGAGT---TCACGATCGTGAA 19544 Query 55618 CAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGAT---CAAGAC 55674 |||| ||||| | ||||| ||| || | || |||| || || | ||| | Sbjct 19543 CAAGTACCTCATGAAGGAGCTGATCGAGCTGGGCATCTGGACGCCTGAGGTGCGCAA-CC 19485 Query 55675 GGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGA---GATTCCTCTGCGTCTCAA 55731 ||| || || | |||| || ||||| ||||| || | ||||| | |||| Sbjct 19484 AGATTCTG-GCTG-ACGGTGGCTCCGTGCAGAAGGTGAAATCCATTCCGGACCAGGTCAA 19427 Query 55732 GGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGA 55791 ||||| ||| ||||||||||||||| |||||| || | ||| || || || Sbjct 19426 GGAGAAGTACAAGACGGTGTGGGAGATCAAGCAGAAGGCCGTGTTGGACCTGTCGGCGGA 19367 Query 55792 TCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACT 55851 ||||| || ||||| |||| |||||| |||||||| ||| | | || | | Sbjct 19366 CCGTGGCGCCTACATTTGCCAGAGCCAGTCGCTGAACATTCACATTGCCGACCCGACGAT 19307 Query 55852 GGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTA 55911 |||| ||| || |||||||| |||| ||||||||||| ||||||||||| ||||| Sbjct 19306 TAGCAAGCTGACGTCCATGCACTTCTACGCCTGGAAGAAGGGGCTCAAGACGGGCATGTA 19247 Query 55912 CTATCTGCG 55920 ||| |||| Sbjct 19246 CTACATGCG 19238 >seq369 Length=28485 Score = 158 bits (174), Expect = 1e-33 Identities = 312/452 (69%), Gaps = 15/452 (3%) Strand=Plus/Plus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| || ||||| ||||| |||||||||| || | |||||| | || ||| |||||| Sbjct 12069 AACCC-GTACCGATCCCCTCCGCACCATTCACGAGCAGCATCGGGATGATAGGCACGTAG 12127 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 | |||| || || | | ||| ||||| ||||| || | ||||| ||| ||| Sbjct 12128 TGCACAGGTTCAACTGGGAAACCATCGTCGTCTGCGTACCGCAGTAGCGCATCGTC-CTC 12186 Query 117269 GGATCGAATATGTTCTTGGTCCACGGTGCT-----AGGCGAGTGAAAATGTAACGAGAGC 117323 ||| | | | | | | ||||| || | ||||| |||||||||| || Sbjct 12187 C--TCGGGAAAGAGCAAG--CGAGTGTGCTTTTGGAGCAGCGTGAAGATGTAACGAGGGC 12242 Query 117324 TTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGT 117383 | || ||||||||||| || ||||| ||||||||||| || || | ||| || Sbjct 12243 TAGCGGCATCCTTGCCTCCTTGCAGACGGGTACCGAATTGACCTGAAGGATACAACAGCG 12302 Query 117384 TCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCG 117443 |||||||||| ||||| || | || |||| |||||||||||| || || | Sbjct 12303 GAAGGTTGTTGGATCCCACGAAATCCTGCGCCATGTTGACAATCGTCGAGTGCAGTGAAG 12362 Query 117444 CCTCACCATGGTGATACGCCGTCTGCTC-CGCCACGTAGCCCGCCAGCTGAGCCACCTTC 117502 | || |||||||| || ||||| ||||| | || ||||||||||||||| |||||||| Sbjct 12363 CTTCGCCATGGTGGTAAGCCGTATGCTCACTGCA-GTAGCCCGCCAGCTGTGCCACCTTA 12421 Query 117503 ATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTC 117562 | || ||| || || || ||||| || ||| |||||| ||||| |||| Sbjct 12422 ACCTCGCTCGTTAGCTTACGTTTCAGGCATGCGAAAAGCACCTTACGCTGCGAGATCTTC 12481 Query 117563 AGACCATCCGCCACGTGAGGG-ATCGAACGCT 117593 || || || |||| ||||| | ||| |||| Sbjct 12482 AGGCCGTCAACCAC-CGAGGGCAGCGATCGCT 12512 Score = 143 bits (158), Expect = 3e-29 Identities = 196/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | ||| || ||||||||||| ||| ||| || || || || | Sbjct 12222 GCGTGAAGATGTAACGAGGGCTAGCGGCATCCTTGCCTCCTTGCAGACGGGTACCGAATT 12281 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || || || | | || |||||||||| |||||||||| ||| |||| || | Sbjct 12282 GACCTGAAGGATACAACAGCGGAAGGTTGTTGGATCCCACGAAATCCTGCGCCATGTTGA 12341 Query 152147 CAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATC 152206 ||||||| ||||| ||||| || ||||| || ||||| ||||| | ||| | Sbjct 12342 CAATCGTCGAGTGCAGTGAAGCTTCGCCATGGTGGTAAGCCGTATGCTCACTGCAGTAGC 12401 Query 152207 CCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266 |||||| ||| |||||||| | || |||| || || || || || ||| ||| || Sbjct 12402 CCGCCAGCTGTGCCACCTTAACCTCGCTCGTTAGCTTACGTTTCAGGCATGCGAAAAGCA 12461 Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 |||| ||||| || |||| ||||| ||||| Sbjct 12462 CCTTACGCTGCGAGATCTTCAGGCCGTCAACCAC 12495 >seq18 Length=94768 Score = 154 bits (170), Expect = 2e-32 Identities = 560/860 (65%), Gaps = 25/860 (3%) Strand=Plus/Plus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||| || || || || || ||||| || || ||||||||||| || | || |||||| | Sbjct 736 CTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 795 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATA--GGCTTCTCCCCAAACTGTGC- 74572 |||||||||||||| |||||||| | ||| || || | | ||| | || | Sbjct 796 ATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCC---AGTGAGTA 852 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632 || ||||| || ||||| || | |||||||| ||| | | | ||||||||| Sbjct 853 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGAT 912 Query 74633 GAGTTTGCACGGC-AGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGA 74691 || | ||||| || | ||| | | ||||| ||| | | | ||| | | Sbjct 913 CAGCTC-CACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTCACGCA 971 Query 74692 CAATCTTGTGAATG----TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAA-GCGT 74746 | ||| ||| | | ||| || || ||| | | || | ||||| | | | Sbjct 972 CGATCGCGTGCACGCGGCTCTCCGGCAG----CTTGTTCACCAACTTCGAGTACATGAGG 1027 Query 74747 CACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAG 74806 |||| | || ||| ||| ||| || || | ||| || | || ||||| || || Sbjct 1028 CACG-CGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAG 1086 Query 74807 GCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAA 74866 |||||||| || || |||||||| | ||| ||||||| ||||||||||| |||||| Sbjct 1087 ACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAA 1146 Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAG--TC 74924 ||||| || || || || || | || || | || | | | | | | || || Sbjct 1147 AATGCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTC 1206 Query 74925 ATCCAAGTCTGAGC-CCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTT 74982 | | | | ||||| || | | ||| | | |||| |||| || ||||| || Sbjct 1207 ACACCACT-TGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCAC 1265 Query 74983 GGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 | | | | ||||||| ||| ||||||| | | |||| |||| || |||||| Sbjct 1266 GCAGCAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACA 1325 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 |||||| || || |||| || ||| |||| | ||||||| | || ||||| | Sbjct 1326 CCTCCGAGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGC 1384 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 | || || || || || ||||| | | ||||| | ||||||||||| ||| Sbjct 1385 ACTTGCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCA 1444 Query 75162 GCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAA 75221 ||||| || || || || ||||| ||||||||||| | ||| || || || |||| Sbjct 1445 GCGAAGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAG 1504 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTT 75281 ||||||||||| | ||| || | ||||||| |||||||||| | | |||||| Sbjct 1505 TCCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTC 1564 Query 75282 TTGTACAAAGACCACAAGTC 75301 ||||||| ||||| ||| Sbjct 1565 TTGTACATCTGCCACACGTC 1584 >seq287 Length=32939 Score = 104 bits (114), Expect = 3e-17 Identities = 235/351 (67%), Gaps = 2/351 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || ||||| || |||| |||||| | || ||| ||| | Sbjct 23047 CCTGTTCCGATACCATCACTGCCGTTCACGAGAACCATCGGGATGATCGGGATGTACCAT 23106 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 || || || | || ||||| || || || |||| || ||||| |||| Sbjct 23107 TCGGGTTCGATAGACTGGCCGTCTTCATCCAAATACTTCAGCACATCGTTGTCCAGCGGA 23166 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCA 152055 ||| | || |||| || | | ||| ||||| || || || | |||||| | Sbjct 23167 TCGTAGATAAGTCGCGTGAGCTGCTCCAAGTTGGTGAAAATATAACGAGCGCTGGCAGAG 23226 Query 152056 TCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCC-AGAGGGCTCGAGGAGGTTGAGGTT 152114 |||||||| || ||| ||||| || ||||| || | ||| | || |||| || ||| Sbjct 23227 TCCTTGCCGCCCATCAGACGCGTACCGAACTGACCGATAGGAGAC-AGAAGGTGGATGTT 23285 Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACC 152174 ||| || ||||||| ||| |||| ||||| || ||| |||| |||| || || Sbjct 23286 GTTACTTCCAACGAAATCCTGCGCCATGTTCACGATACAGCCTTGCAAACTCTGCTCTCC 23345 Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTT 152225 ||| || ||||| | ||||||| | || || ||||||||||||||||| Sbjct 23346 GTGATGGTACGCAGAGTGCTCCGAAACATAGCCAGCCAACTGCGCCACCTT 23396 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||| ||||||| ||| |||| |||||||| || |||||||||||||| || Sbjct 23200 GTGAAAATATAACGAGCGCTGGCAGAGTCCTTGCCGCCCATCAGACGCGTACCGAACTGA 23259 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | || || |||| | |||||| || || || | || |||| ||| || Sbjct 23260 CCGATAGGAGACAGAAGGTGGATGTTGTTACTTCCAACGAAATCCTGCGCCATGTTCACG 23319 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 || ||||| | ||| ||| || || || ||||| | ||||||| || ||||| Sbjct 23320 ATACAGCCTTGCAAACTCTGCTCTCCGTGATGGTACGCAGAGTGCTCCGAAACATAGCCA 23379 Query 117485 GCCAGCTGAGCCACCTTCATGTCTGAC 117511 |||| ||| |||||||| | |||||| Sbjct 23380 GCCAACTGCGCCACCTTAAGCTCTGAC 23406 >seq25 Length=82967 Score = 87.8 bits (96), Expect = 2e-12 Identities = 179/262 (68%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 158927 CACATGCGAAAACAATAAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGT 158986 || |||||| | | |||||| || | || || |||||| || |||| ||||| | Sbjct 41264 CAAATGCGAGCTCCACAAACTCACGAACACTATGACACTCTCCGGTGGCAACAACAAAAT 41205 Query 158987 CCTCTGGACCGGGCTGTTGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGAC 159046 ||| ||| | ||||| |||||| |||||||| || || || || | ||||| | Sbjct 41204 CCTGTGGCGTGTCGTGTTGAAGCATGCGCCACATGCATTCCACATAGTCACGGGCGTGGC 41145 Query 159047 CCCAGTCGCGCTTGGCATCCATGTTCCCGAGCTCGATG-ACTTTTCCAGACTTTTTCCAC 159105 ||||||| ||||||||||||| ||| || | || | || | || | | | | Sbjct 41144 CCCAGTCACGCTTGGCATCCAGGTTGCCCACAAAGAGGCACCTCTCAATCCCCGCACGAA 41085 Query 159106 TCAGCCAGACCG--AGCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGA-- 159161 | || |||| ||||||||||||| ||||| || || |||||| || | || Sbjct 41084 TGCGCACCACCGCACGCGTGATCTTGCGGGTCACGAAGGTTGGTCCGCGTCG--CGGACT 41027 Query 159162 CTCATGGTTAAACAGAATGCCG 159183 ||| ||||| |||||||| ||| Sbjct 41026 CTCGTGGTTGAACAGAATCCCG 41005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547184795007600