Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq30 228 1e-54 seq3929 217 3e-51 seq320 168 1e-36 seq50 154 3e-32 seq2669 147 4e-30 seq137 134 3e-26 seq1080 129 1e-24 seq193 111 3e-19 seq402 102 2e-16 >seq30 Length=82662 Score = 228 bits (252), Expect = 1e-54 Identities = 413/591 (70%), Gaps = 16/591 (3%) Strand=Plus/Plus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGC-TCAGGAGACTGGAGCATTTTCCACATTGCTTC 268269 || || |||| ||||| |||| |||| | | | || ||||| |||||| ||| Sbjct 41635 CCGGTGGCAACAACAAAATCCTGTGGCGTGTCGTGT-TGAAGCATGCGCCACATGCATTC 41693 Query 268270 GACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCA 268329 |||||||| || || |||||||| || ||||| || |||| ||| || | || ||||| Sbjct 41694 CACATAGTCACGGGCGTGGCCCCAGTCACGCTTGGCATCCAGGTTGCCCACAAAGAGGCA 41753 Query 268330 TTTCTGCTTGCCGAGCTTCACGCGTGC--AAGACCGC--GAGTGATTTTTCGGGTCACGA 268385 ||| | || |||| ||| | ||||| | ||||| || |||||||||| Sbjct 41754 CCTCTCAATCCCCG----CACGAATGCGCACCACCGCACGCGTGATCTTGCGGGTCACGA 41809 Query 268386 ACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC-GCGAACATG 268444 | || || ||| | || |||||||||||||| || || ||||| ||| ||| |||| Sbjct 41810 AGGTTGGTCCGCGTCGCGGACTCTCGTGGTTGAACAGAATCCCGTT-CACGGCGTACATC 41868 Query 268445 CCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTAC 268504 || || || || |||| |||||| || |||| | |||||| ||| || || ||||| Sbjct 41869 CCGTAGGCTTCTCGGTGGTTCACCACACTCCAAAACGCAAACTGCTTCGCTACACCGTAC 41928 Query 268505 GGAGAACGTGGATGGAAGGGCGTCGTGATC-TTTTGAGGGATTTCTCGGACTTTGCCAAA 268563 || || || || ||||| ||||| || || | || ||| | || | |||||||| || Sbjct 41929 GGTGAGCGCGGGTGGAACGGCGT-GTCTTCATCCTGTGGGGTGGCTTGCACTTTGCCGAA 41987 Query 268564 GAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGAT 268623 | ||| || || |||||||||||| |||| | ||||| || || | || | Sbjct 41988 TAATTCGCTCGTAGACGCTTGGTAGAACCGCGTTGAATGCTCGAGCCCACACGTGCGCAA 42047 Query 268624 TGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTC 268683 | |||| ||| || | ||||| | || ||||| || || ||||| | |||||| Sbjct 42048 ACACGTCAGCAGACGCAGCGCTCCCAGCGCGTCGACGTCTGCCGTGTACTCGGCCATCTC 42107 Query 268684 GAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTG 268743 || || || | |||||| | ||||||||||| || || ||||| |||| ||| | Sbjct 42108 AAACGAGACTTTAACATGGGACATCGCGCCCAGGTTGTACACTTCATCGGGTTGGACGCG 42167 Query 268744 CTGCACGATCT-TCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793 | |||||||| ||| || |||| | ||| ||||||||||||||||||| Sbjct 42168 CGCCACGATCTGGCAC-AGATTCGACGCGTCCGTGAGGTCTCCGTAGTGCA 42217 >seq3929 Length=1496 Score = 217 bits (240), Expect = 3e-51 Identities = 618/938 (66%), Gaps = 29/938 (3%) Strand=Plus/Minus Query 9893 TTAGAAGTCTGCGTCAATTGCAAACACGTTGTCGTCGGCATTCATGACGCCC------GC 9946 ||| ||||||||||| | | ||||| | ||| ||||| | ||| ||| || Sbjct 1319 TTAAAAGTCTGCGTCCAGAGTGAACACCTGGTCCTCGGC---CGCGACACCCACACCAGC 1263 Query 9947 CTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAG 10006 ||| |||||| || || |||||||||||||| |||||||| || || || | Sbjct 1262 CTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 1203 Query 10007 CTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAA 10066 ||||| |||| || ||||||| || | ||||| ||| |||| | Sbjct 1202 ATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCCAGTGAGTACAG 1143 Query 10067 AATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCAT 10126 | |||||| |||||||||||||||||||||| ||| || | ||||||||||| |||| Sbjct 1142 CAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGATCA- 1084 Query 10127 GCGGCA-GGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGA 10185 || || ||||| | ||||| | ||| || | || | | || || || |||| Sbjct 1083 GCTCCACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTCACGCACGA 1024 Query 10186 TGCTCTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCC 10243 | | | | | || || || |||||||||| | | |||||| |||| ||| | Sbjct 1023 T-CGCGTGCACGCGGCTCTCCGG-CAGCTTGTTCACCAACTTCGAGTACATGAGGCACGC 966 Query 10244 AAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGG 10303 || | | ||| | ||||||||| |||||||||| |||||| || || | |||||| || Sbjct 965 GAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAGACCAGG 906 Query 10304 CATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACC 10363 |||||| || || || |||||||| |||| |||||| || || ||||| | || || Sbjct 905 CATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAAAATGCC 846 Query 10364 CTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGCGA---AAAGTA 10420 ||||||| | | || | || ||||| | | |||| | || | | | | Sbjct 845 CTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTCACACCA 786 Query 10421 TTTCGAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGC---CTCGA 10476 || ||| ||||| |||||||| ||||| |||||||||||||| || | | Sbjct 785 CTT-GAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCACGCAGCA 727 Query 10477 AGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCT 10536 || | | || | ||| |||||| || | || | ||||| ||||| || Sbjct 726 AGTGATCCTTCTCCACGG---CGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACACCT 670 Query 10537 CGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCG 10596 | ||||| | |||| || |||| | ||||||| || ||| || | Sbjct 669 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGCACTT 610 Query 10597 TGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAA 10656 || || | | ||||| | ||||||||| |||| ||||| |||||| | || | Sbjct 609 GCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 550 Query 10657 AGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGT 10716 |||| | || | ||||||||||||||||||||| | || |||| || | ||||| Sbjct 549 AGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTT---CCCCCAGT 493 Query 10717 CTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCT 10776 | || || || || | | |||||| | |||||||| | || | ||||||| Sbjct 492 CCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCT 433 Query 10777 TGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 |||||||||| | | |||| | | | |||| |||||| Sbjct 432 TGTACATCTGCCACACGTCGTGCTCCTGGATCGGGAAC 395 >seq320 Length=29447 Score = 168 bits (186), Expect = 1e-36 Identities = 440/664 (66%), Gaps = 24/664 (4%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||| | |||| ||| ||||| |||||| ||||||||||| Sbjct 14145 CGCCACTGGATGTACTGGTTCGCGGTCTCGTCGAGGTGAGACTCAATGTGGTGGAAAGCG 14086 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 |||||||| || || || | |||||| || ||||||||||| ||| | || || Sbjct 14085 TGCTGGGCCACATAGGCGAAACGCATGGAAGGGTGCTTCCACACCTGGCCACTCGTGGGC 14026 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | |||| || || || | ||||| | || | ||| || ||||| ||||| |||| | Sbjct 14025 TCAACCTCACCCGTCAGCATTTTGATCATGGTCGACTTTCCGGCACCGTTGGGTCCAAGC 13966 Query 225161 ACGCCAATCCGGGATGACATTGCA-ACCTG--CGAGTTCACGTTGCT-GAAGATCTCAGG 225216 ||| | || ||| |||| || || | ||| | |||| | || | || || Sbjct 13965 ACGGCGATACGGCTCGACAAAGCGCACGTCACCGAAATGTTGTTGATCGACGGCTTCGGG 13906 Query 225217 G--CCAGTTT---GGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271 | |||| | |||| | | || | ||| | |||||| ||||| Sbjct 13905 GTGCCAGGGTACTGGTACGAACAGTTCGTCAGACGAA------TGATGGGTTTACCCTTG 13852 Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC---C 225328 | || | | ||||| |||||||| |||||| |||| ||| ||| | Sbjct 13851 TTCTTGATGTCGGCGAGGAAACCGGGCTCCGGGAACGTGAACTT---CACGTTGTCAGAC 13795 Query 225329 TTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCG 225388 | ||| |||||||| | ||||| || || ||||||||||||| ||||| || Sbjct 13794 TCCAGCTCGTAGTAGGCCTTGGCCTCAGGCTTCTGCTCCACGAAAGCAGAAAGGTTGCCC 13735 Query 225389 AGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCA 225448 || || | ||||| | | ||||||| |||| || | || || | ||| Sbjct 13734 TTGTAGATCTTCAGCTTACG---CGTCTCGTAGTGAATGATGTTGGTACAGACAGTGTCG 13678 Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGC 225508 ||||| ||||||||||| ||||| |||||| || |||||||| ||||| | | |||| Sbjct 13677 AGGAACCCAGAGTCGTGCGACACCATGATGCTCGTCACGTTCGGCAGGCTCGTCAGGTAG 13618 Query 225509 GTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGG 225568 | ||||| || ||||| |||| |||| ||||| || || || || || |||||| Sbjct 13617 TTCTCCAGCCAGGCGACGTTCTTGACATCCAAATGGTTCGTCGGCTCATCAAGGAGCAGG 13558 Query 225569 ATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGAC 225628 ||||| || | || ||||| || | || || ||||| ||||| || || || Sbjct 13557 ATGTCTGCCTTCTGCAGCATGGCACGAGCAAGCTCAAGTTTCATCTTCCAACCACCCGAA 13498 Query 225629 AGGG 225632 |||| Sbjct 13497 AGGG 13494 Score = 114 bits (126), Expect = 2e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 224449 GTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAG 224508 ||| | ||| | || ||||| ||| ||| || | ||| || | ||| || ||||| Sbjct 14689 GTGGGTAATCATGACCACACCACCGTTGAAGTCCTTGATGGCCGAAGCAAGAGCACCAAG 14630 Query 224509 CGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCA 224568 ||| |||||||| ||| ||||||| |||||||| || | | | ||| ||| | |||| Sbjct 14629 CGAGTCGCGGTCGAGGTAGTTCGTGGGCTCATCAAGCACCAGGATGTGCGGGTTCAGCCA 14570 Query 224569 CAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628 || ||| || || | ||| | ||||||||||||||| ||||| || || || || ||||| Sbjct 14569 CATGGCAGCTCCCAGCACAACCTTCACCTTCTGACCACCAGACAGACCACGCATGCGCGA 14510 Query 224629 GTGAGT 224634 ||| || Sbjct 14509 GTGCGT 14504 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 225778 GTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATC-GGGGAAGCCCTCCAGCTGGC 225836 || ||| || ||| |||| ||| |||| || || | |||||||||||| ||||| | Sbjct 13351 GTTGTGCTCAACGAACACAGTCTTCAGCTCGGA-GCGGCTGGGGAAGCCCTCGAGCTGAC 13293 Query 225837 CATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGT 225896 | || | || || || | ||| || ||| || |||||||| ||| || |||| Sbjct 13292 CGTTGGAGATAGCGCGCATCAGAGTCGACTTACCACAACCGTTGGGGCCGCACAGACCGT 13233 Query 225897 AATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGG 225956 || | | || ||||| | | ||||| | | |||||| || ||| | ||||| |||| Sbjct 13232 AACGGTGGCCACGCTTCAAGCGAAGGCGGGCGTTGTTCAGCAGAATCATACCACCGTAGG 13173 Query 225957 CAAGGGAGAACTCGCAATCGCACAGGTCC 225985 |||| ||||| ||||| | |||||||||| Sbjct 13172 CAAGCGAGAATTCGCAGTTGCACAGGTCC 13144 Score = 84.2 bits (92), Expect = 4e-11 Identities = 214/323 (66%), Gaps = 2/323 (1%) Strand=Plus/Minus Query 226337 GCGTCCGCGGGATCCTCCACGAGGCGCGACATGTTGTTGATAATCACACAGGTCTTGCGC 226396 || || || || || |||| ||| ||||||||| || || ||| | || ||| Sbjct 12702 GCCTCAGCAGGGTCGTCCATGAGCTTGCACATGTTGTCAATGATGACAGCAGCCTGACGC 12643 Query 226397 TTCACCACGGTGGTGCGCTCCGCGAGACCGCGGCAGATGAGGGGCACGAGCACGGCAAGG 226456 ||||| || ||| ||| || | | | || | || ||| | | | |||||| Sbjct 12642 TTCACGGACGTCTTGCCCTCAGCCAAAGCACGCTTCAGCAGCGGCTCCATGATGGCAAGA 12583 Query 226457 GTCCGGGCATCCACGGTCTGGACAAAAGTGGTCGCGGACAGCTTGTGGACGCACTCGGGG 226516 | |||| |||||||||| || || ||||||| || || |||||| |||||| || Sbjct 12582 GCGGGGGCCTCCACGGTCTTAACGAACGTGGTCGAGGCCAACTTGTGCGTGCACTCCGGC 12523 Query 226517 ACCTGGCTCGTGTCGGAAATAGA-CTCGATGAGGTGGGGCACAAAGGGGTCAATGTCCTT 226575 || | | | || || | | | ||| | ||| || | ||||| || || ||| | Sbjct 12522 ACTTCCGTGGGGTTGGCCAGACAGCTC-ACCAGGGCAGGGATGAAGGGTTCGATATCCAT 12464 Query 226576 GTTGCCAATGGACTTGCAGCACATGACCAGAGTGTCCTTGGCAGCATCCTTCACAGCCTT 226635 |||||| | | |||||| | || || ||||||||||| ||| |||| || |||| Sbjct 12463 GTTGCCCACGACGTTGCAGACCTTGGTCATGGTGTCCTTGGCGGCAACCTTGACCTCCTT 12404 Query 226636 GCGGATGTCAACCATGCAGTCCG 226658 |||| | || ||||||||||| Sbjct 12403 GCGGGTATCCCACATGCAGTCCG 12381 >seq50 Length=70362 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 ||||| |||||||| |||| |||||||| || || ||||| || |||||||| || ||| Sbjct 19621 TTTCCGCCGCGAAGACGCAGCACCAAGTGCAGTGTAGACTCCTTCTGGATGTTGTAGTCG 19680 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 || || | || || || | |||||| |||||||| || || | || |||||||| Sbjct 19681 CTCAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGC 19740 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 || ||||| ||||||||||| || || ||| ||| ||||||| ||| | | || Sbjct 19741 GGGATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATGGAGTCCGAAGGCTCC 19800 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||| |||||||| || ||||| | ||||| ||||| |||||||| Sbjct 19801 ACGTCCAGCGTGATGGTCTTGCCCGTCAACGTCTTCACGAAGATCTGCAT 19850 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| ||||| ||||| || |||||||| || ||| Sbjct 19852 CCACCACGCAGACGCAGCACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 19911 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || |||||||| || Sbjct 19912 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 19971 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| || || ||| ||| ||||||| ||| | | || || Sbjct 19972 ATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATGGAGTCCGAAGGCTCCACG 20031 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| || ||||| | ||||| ||||| |||||||| Sbjct 20032 TCCAGCGTGATGGTCTTGCCCGTCAACGTCTTCACGAAGATCTGCAT 20078 >seq2669 Length=2431 Score = 147 bits (162), Expect = 4e-30 Identities = 225/318 (71%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 || || || | ||| |||||||| ||||| ||| ||||| |||||| | || Sbjct 1177 CCGGTGGCCAGCACGAAGTCCTCGGGCTCGTCCACCTGCAGCATGCGCCACATGCCCTCC 1236 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 ||||| || || | |||||| ||||| | || |||| ||| || | | ||||| Sbjct 1237 ACATACTCGGCGGCGTAGCCCCAGTCGCGGATGGCATCCAAGTTGCCCATGTACAGGTGC 1296 Query 268331 TTCTGCTTGCC-GAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGT 268389 | ||||||||| | | |||| || | | ||| ||||| || ||||||||||| || Sbjct 1297 TCCTGCTTGCCCGCGGCGATCGCGGCCACGGC-GCGCGTGATCTTGCGGGTCACGAAGGT 1355 Query 268390 CTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATA 268449 |||||| || | ||| |||||||||||||||||| ||||| |||||||||| | || Sbjct 1356 CTCGCCGCGCCGCGGGGACTCGTGGTTGAAGAGGATCCCGTTCACCGCGAACATGTCGTA 1415 Query 268450 TGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGA 268509 ||||| ||||||||| | ||||||| | | | ||||| || | ||||||| || Sbjct 1416 CGCCTCGCGGTAGTTCTTGGTGATCCAGTACGAATAGATCTTGGCCGCGCCGTACGGCGA 1475 Query 268510 ACGTGGATGGAAGGGCGT 268527 || || | ||| || || Sbjct 1476 GCGCGGGTAGAACGGGGT 1493 >seq137 Length=47801 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| ||||| || || || |||||||| || ||| Sbjct 15591 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTC 15650 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| || ||||| || || | || ||||| || || Sbjct 15651 AGCGTGCGGCCGTCTTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGCGGG 15710 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| ||||| || ||| ||| ||||| | ||| | | || || Sbjct 15711 ATGCCTTCCTTGTCCTGAATTTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCACG 15770 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||||||| || || ||||| | ||||| ||||| |||||||| Sbjct 15771 TCCAAGGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAGATCTGCAT 15817 >seq1080 Length=8813 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || ||||| || | || || || | |||||| |||||||| || Sbjct 3773 TTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 3714 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || ||||||||||||||||| || || || |||||| || Sbjct 3713 AGGCGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTGACATTGTCA 3654 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 ||| |||| | | ||||| |||| |||||||| || ||||| |||||||| || || Sbjct 3653 ATGCTGTCGGACGGCTCTACGTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAG 3594 Query 68454 ATCTGCATTAT 68464 |||||||| || Sbjct 3593 ATCTGCATGAT 3583 >seq193 Length=40222 Score = 111 bits (122), Expect = 3e-19 Identities = 254/377 (67%), Gaps = 18/377 (5%) Strand=Plus/Plus Query 173102 ATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTCG 173161 || ||||| || ||||||||||| || ||| | || ||||||||||||||||| |||||| Sbjct 34612 ATCGACACCATCATGCACTTTGCAGCCCAGTCTCACGTGGACAACTCGTTCGGGAACTCG 34671 Query 173162 CTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGGCTC 173221 | | || | || || ||| | | || |||||||| || ||||| |||||||| Sbjct 34672 ATCGAGTTCAGCAAGACCAATATATTGGGCACCCACGTGCTGCTGGAGGCTGCGAGGCTG 34731 Query 173222 TATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACG-----GCGAGA 173276 || || || || |||||||| ||||| || ||||| || |||| | |||| Sbjct 34732 CAT---GGAGTGAAGAGGTTCATCCATGTGAGCACGGACGAGGTGTACGGAGAAGGGAGA 34788 Query 173277 GCAGTCTGGGCAAAAAAGAAGGCCTCGATGAACACTCGTCCCTCGAGCCAACAAACCCAT 173336 | | || || | || | || || || || || ||||| || ||||| | Sbjct 34789 CCCGACTCCGCTCCGATGACG-----GAAGATCA--TGT-GCTGGAGCCGACGAACCCGT 34840 Query 173337 ATGCAGCAGCCAAGGCTGGTGCCGAAATGAT-GGCACGTGCATATCACACATCGTACAAG 173395 | || || | || || || ||||| | | | || | | || ||| |||| | Sbjct 34841 ACGCGGCCACGAAAGCGGGGGCCGAGTTCCTCGTCAAG-ACGTACCACCGCTCGTTCGGC 34899 Query 173396 CTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCCGAAAAA 173455 || || |||| | |||||| |||| || ||||| ||||||||||||| ||| || || Sbjct 34900 CTGCCGACCATCATCACGCGCAGCAATAACGTGTACGGCCCGCATCAGTACCCGGAGAAG 34959 Query 173456 ATGATCCCAAAATTTAT 173472 | ||||| || |||| Sbjct 34960 CTCATCCCCAAGGTTAT 34976 >seq402 Length=25332 Score = 102 bits (112), Expect = 2e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 || |||||||| | ||||||| ||| ||||||||||||||||||| | | | ||| Sbjct 21679 AGAGCGCCAAGTGCGGCGCGGTCCAGGTAGTTCGTCGGCTCATCCAGCACCAGCAGGTGC 21738 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 |||| | ||||| || ||| | | || ||||||||||||||||| || || |||||| Sbjct 21739 GGGCGGTTCCACATCGCAGCAGCGATGACAAGCTTCACCTTCTGACCACCCGACAGGCCG 21798 Query 224618 CGGATC 224623 |||||| Sbjct 21799 CGGATC 21804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921560443934160