Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq4782 113 1e-20 >seq4782 Length=1171 Score = 113 bits (124), Expect = 1e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 24828 CTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATC 24887 |||||||||||||||||||||||| |||||| | ||||| |||||||||||||| ||| Sbjct 149 CTGAGCTGCCAGCTCTACCAGCGCTCGGCGGACCTGTTCCTGGGCGTGCCGTTCAACATC 90 Query 24888 GCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGTCGGCGAA 24947 || |||||||||||| ||| | || || | ||| || ||| | |||||| Sbjct 89 GCCTCCTACGCGCTGCTCACCGTGATGTTGGCCCAGCAGTGCGACCTGGTGCCCGGCGAG 30 Query 24948 TTCATCTGGACCGGCGGCGACGTCCAC 24974 ||| | ||||||||||| ||| |||| Sbjct 29 TTCGTGTGGACCGGCGGGGACTGCCAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164162315309344