Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_021324.1 Length=53369 Score E Sequences producing significant alignments: (Bits) Value seq2019 80.6 9e-11 >seq2019 Length=3514 Score = 80.6 bits (88), Expect = 9e-11 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 51146 CAGGACTCGAACCTGCAACCGGCGGTTTTGGAGACCGCTGCTCTACCAA 51194 |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 215 CAGGACTCGAACCTGCAACCTGCGGTTTTGGAGACCGCTGCGCTACCAA 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170648301063516